Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_H04
         (905 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1571 + 27811510-27811613,27812493-27812563,27812798-278128...    84   1e-16
01_01_0078 + 587975-588179,588506-588606,589087-589167,589240-59...    30   2.9  
02_01_0177 + 1214226-1214294,1214707-1214794,1216095-1216308,121...    29   6.7  
12_02_0449 - 19167167-19167300,19167394-19167550,19168527-191685...    28   8.9  
01_01_0891 + 7023383-7023700,7024627-7024705,7024888-7024951,702...    28   8.9  

>07_03_1571 +
           27811510-27811613,27812493-27812563,27812798-27812889,
           27812963-27813022,27813130-27813351,27813450-27813526,
           27813618-27813687,27813793-27813906,27813985-27814051,
           27814259-27814363,27814470-27814594
          Length = 368

 Score = 84.2 bits (199), Expect = 1e-16
 Identities = 40/122 (32%), Positives = 75/122 (61%), Gaps = 2/122 (1%)
 Frame = +3

Query: 96  CKELPKIELHAHLNGSLSQATMLQLQRYYVDAGISDKTNTFLDEFQIGAGDTRNLSECFQ 275
           C  LPK+ELHAHLNGS+  +T+L+L +   D G       F D   +   + R+L ECF+
Sbjct: 13  CVALPKVELHAHLNGSVRDSTLLELAKQLGDKG----DIVFEDVKDVIMKNGRSLPECFR 68

Query: 276 VFNIAHSLTSTSEALVMATELTLQEFQEDGCCYIELRSTPRDTQY--ITKKQYIDSIIRA 449
           +F + H LT+  + +   T+  +++F  +   Y+E+R+TP++ +   +TK+ Y++++I+ 
Sbjct: 69  LFELYHILTTDHDTVTRITKEVVEDFAMENVVYLEIRTTPKNNEAKGMTKRSYMNAVIKG 128

Query: 450 ME 455
           ++
Sbjct: 129 LK 130



 Score = 78.2 bits (184), Expect = 8e-15
 Identities = 30/62 (48%), Positives = 46/62 (74%)
 Frame = +3

Query: 582 VVGIELSGNPAVGNFGDFIPALNRARQSGLKVTLHCGEVCNPEEVLEMLNFKPERIGHGV 761
           V+GI+LSGNP VG +  ++PAL  A++ G+ +T+HCGEV N  E+  +L+F P+R+GH  
Sbjct: 195 VIGIDLSGNPVVGEWETYLPALEHAKELGIPITIHCGEVANRNEIRAVLDFCPQRLGHVC 254

Query: 762 CI 767
           C+
Sbjct: 255 CL 256


>01_01_0078 +
           587975-588179,588506-588606,589087-589167,589240-590178,
           590388-590542,590837-590902,590963-591023,591659-591853,
           591939-592049,592116-592280
          Length = 692

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
 Frame = -2

Query: 787 RPPIFRGMQTPCPILSGLKFNISSTSSGLHTSPQCSVTLSPDCLALFKAGIKSPKFPTAG 608
           +PP+ +   T     SG+    ++ SS    SP+ S  L P+   LF     +P  P+ G
Sbjct: 251 QPPLLQPPGTTQGPSSGILPTTTAPSSANLLSPETSKPLLPNMGPLF-----TPPVPSVG 305

Query: 607 --LPLNSIPTTVS 575
             LPL S+PT+++
Sbjct: 306 ATLPLASLPTSIA 318


>02_01_0177 +
           1214226-1214294,1214707-1214794,1216095-1216308,
           1216413-1216738,1216860-1217013,1217377-1217438,
           1218078-1218133,1219456-1221279,1221775-1222698,
           1222855-1222866
          Length = 1242

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +3

Query: 660 QSGLKVTLHCGEVCNPEEV-LEMLNFKPERIGHGVCIPLNMGGRKKHG 800
           +SG K+ L  GEV N EE+ +   NF  +  G  V  P+N   +  HG
Sbjct: 134 ESGYKMLLQGGEVANEEEINILDENFGAKSNGVPVIYPMNGHFQNGHG 181


>12_02_0449 -
           19167167-19167300,19167394-19167550,19168527-19168539,
           19170218-19170540
          Length = 208

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -1

Query: 437 TINILLLCYVLCVTWSTSQLNITTPIFLKLLECQ 336
           TI ++LLC+ L V  +     I +P+   +L CQ
Sbjct: 75  TIKVILLCFALLVAGAPDSPPIPSPVSSAMLFCQ 108


>01_01_0891 +
           7023383-7023700,7024627-7024705,7024888-7024951,
           7025324-7025401,7025513-7025708,7025895-7025963,
           7026115-7026254,7026425-7026547,7027390-7027582,
           7028872-7029034,7029433-7029476,7029683-7029724
          Length = 502

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +3

Query: 693 EVCNPEEVLEMLNFKPERIGHGVCIPLNMGGRKK 794
           +VC PE+V +++NF  + +G  + I +N  G  K
Sbjct: 221 DVCKPEDVKKLVNFAKDELG-SIDIWINNAGTNK 253


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,641,999
Number of Sequences: 37544
Number of extensions: 435914
Number of successful extensions: 954
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)