Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_H03
(888 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a pr... 50 9e-06
U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a pr... 50 9e-06
U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a pr... 50 9e-06
L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens (c... 50 9e-06
BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a ... 50 9e-06
BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a ... 50 9e-06
AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A ... 50 9e-06
BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein. 48 5e-05
BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein. 48 5e-05
BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein. 48 5e-05
AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein. 48 5e-05
AE006463-8|AAK61228.1| 156|Homo sapiens 60S ribosomal protein L... 40 0.012
BX005428-8|CAM26185.1| 123|Homo sapiens major histocompatibilit... 31 7.4
BX005428-6|CAM26183.1| 442|Homo sapiens major histocompatibilit... 31 7.4
BC009260-1|AAH09260.2| 460|Homo sapiens HLA-F protein protein. 31 7.4
AL844851-8|CAM25789.1| 123|Homo sapiens major histocompatibilit... 31 7.4
AL844851-6|CAI18575.2| 442|Homo sapiens major histocompatibilit... 31 7.4
AL669813-9|CAM24949.1| 123|Homo sapiens major histocompatibilit... 31 7.4
AL669813-7|CAI17628.1| 442|Homo sapiens major histocompatibilit... 31 7.4
AL645939-8|CAM25440.1| 123|Homo sapiens major histocompatibilit... 31 7.4
AL645939-6|CAI18086.2| 442|Homo sapiens major histocompatibilit... 31 7.4
AL022723-13|CAI20359.1| 442|Homo sapiens major histocompatibili... 31 7.4
>U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 50.4 bits (115), Expect = 9e-06
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = +1
Query: 709 KALKAQRKVVKGEHGKRVRKIRXSVHFRRPKTFEPPXHPKYQRK 840
KALKA++ V+KG H + +KIR S FRRPKT PKY RK
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRK 63
>U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 50.4 bits (115), Expect = 9e-06
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = +1
Query: 709 KALKAQRKVVKGEHGKRVRKIRXSVHFRRPKTFEPPXHPKYQRK 840
KALKA++ V+KG H + +KIR S FRRPKT PKY RK
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRK 63
>U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 50.4 bits (115), Expect = 9e-06
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = +1
Query: 709 KALKAQRKVVKGEHGKRVRKIRXSVHFRRPKTFEPPXHPKYQRK 840
KALKA++ V+KG H + +KIR S FRRPKT PKY RK
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRK 63
>L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens
(clone 01) liver expressed protein mRNA, 3'end. ).
Length = 147
Score = 50.4 bits (115), Expect = 9e-06
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = +1
Query: 709 KALKAQRKVVKGEHGKRVRKIRXSVHFRRPKTFEPPXHPKYQRK 840
KALKA++ V+KG H + +KIR S FRRPKT PKY RK
Sbjct: 11 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRK 54
>BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 50.4 bits (115), Expect = 9e-06
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = +1
Query: 709 KALKAQRKVVKGEHGKRVRKIRXSVHFRRPKTFEPPXHPKYQRK 840
KALKA++ V+KG H + +KIR S FRRPKT PKY RK
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRK 63
>BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 50.4 bits (115), Expect = 9e-06
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = +1
Query: 709 KALKAQRKVVKGEHGKRVRKIRXSVHFRRPKTFEPPXHPKYQRK 840
KALKA++ V+KG H + +KIR S FRRPKT PKY RK
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRK 63
>AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A
protein.
Length = 156
Score = 50.4 bits (115), Expect = 9e-06
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = +1
Query: 709 KALKAQRKVVKGEHGKRVRKIRXSVHFRRPKTFEPPXHPKYQRK 840
KALKA++ V+KG H + +KIR S FRRPKT PKY RK
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRK 63
>BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 48.0 bits (109), Expect = 5e-05
Identities = 23/44 (52%), Positives = 30/44 (68%)
Frame = +1
Query: 709 KALKAQRKVVKGEHGKRVRKIRXSVHFRRPKTFEPPXHPKYQRK 840
KALKA++ V+KG HG + +KIR S F+RPKT P+Y RK
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRK 63
>BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 48.0 bits (109), Expect = 5e-05
Identities = 23/44 (52%), Positives = 30/44 (68%)
Frame = +1
Query: 709 KALKAQRKVVKGEHGKRVRKIRXSVHFRRPKTFEPPXHPKYQRK 840
KALKA++ V+KG HG + +KIR S F+RPKT P+Y RK
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRK 63
>BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 48.0 bits (109), Expect = 5e-05
Identities = 23/44 (52%), Positives = 30/44 (68%)
Frame = +1
Query: 709 KALKAQRKVVKGEHGKRVRKIRXSVHFRRPKTFEPPXHPKYQRK 840
KALKA++ V+KG HG + +KIR S F+RPKT P+Y RK
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRK 63
>AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein.
Length = 130
Score = 48.0 bits (109), Expect = 5e-05
Identities = 23/44 (52%), Positives = 30/44 (68%)
Frame = +1
Query: 709 KALKAQRKVVKGEHGKRVRKIRXSVHFRRPKTFEPPXHPKYQRK 840
KALKA++ V+KG HG + +KIR S F+RPKT P+Y RK
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRK 63
>AE006463-8|AAK61228.1| 156|Homo sapiens 60S ribosomal protein L23A
like protein.
Length = 156
Score = 39.9 bits (89), Expect = 0.012
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +1
Query: 709 KALKAQRKVVKGEHGKRVRKIRXSVHFRRPKTFEPPXHPKYQRK 840
KALKA++ +KG H +K R S+ F+RPKT P+Y K
Sbjct: 20 KALKAKKAALKGVHSHIKKKTRTSLTFQRPKTLRRRRRPEYPWK 63
>BX005428-8|CAM26185.1| 123|Homo sapiens major histocompatibility
complex class I F protein.
Length = 123
Score = 30.7 bits (66), Expect = 7.4
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 839 FLWYLGCXGGSNVLGLRKCTEXRIFRTLFPCSPFTTFL*ALSALVTGF 696
F YLGC +VLG RK + I L+ + F T AL +L GF
Sbjct: 50 FQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGF 97
>BX005428-6|CAM26183.1| 442|Homo sapiens major histocompatibility
complex class I F protein.
Length = 442
Score = 30.7 bits (66), Expect = 7.4
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 839 FLWYLGCXGGSNVLGLRKCTEXRIFRTLFPCSPFTTFL*ALSALVTGF 696
F YLGC +VLG RK + I L+ + F T AL +L GF
Sbjct: 369 FQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGF 416
>BC009260-1|AAH09260.2| 460|Homo sapiens HLA-F protein protein.
Length = 460
Score = 30.7 bits (66), Expect = 7.4
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 839 FLWYLGCXGGSNVLGLRKCTEXRIFRTLFPCSPFTTFL*ALSALVTGF 696
F YLGC +VLG RK + I L+ + F T AL +L GF
Sbjct: 387 FQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGF 434
>AL844851-8|CAM25789.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 30.7 bits (66), Expect = 7.4
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 839 FLWYLGCXGGSNVLGLRKCTEXRIFRTLFPCSPFTTFL*ALSALVTGF 696
F YLGC +VLG RK + I L+ + F T AL +L GF
Sbjct: 50 FQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGF 97
>AL844851-6|CAI18575.2| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 30.7 bits (66), Expect = 7.4
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 839 FLWYLGCXGGSNVLGLRKCTEXRIFRTLFPCSPFTTFL*ALSALVTGF 696
F YLGC +VLG RK + I L+ + F T AL +L GF
Sbjct: 369 FQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGF 416
>AL669813-9|CAM24949.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 30.7 bits (66), Expect = 7.4
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 839 FLWYLGCXGGSNVLGLRKCTEXRIFRTLFPCSPFTTFL*ALSALVTGF 696
F YLGC +VLG RK + I L+ + F T AL +L GF
Sbjct: 50 FQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGF 97
>AL669813-7|CAI17628.1| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 30.7 bits (66), Expect = 7.4
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 839 FLWYLGCXGGSNVLGLRKCTEXRIFRTLFPCSPFTTFL*ALSALVTGF 696
F YLGC +VLG RK + I L+ + F T AL +L GF
Sbjct: 369 FQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGF 416
>AL645939-8|CAM25440.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 30.7 bits (66), Expect = 7.4
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 839 FLWYLGCXGGSNVLGLRKCTEXRIFRTLFPCSPFTTFL*ALSALVTGF 696
F YLGC +VLG RK + I L+ + F T AL +L GF
Sbjct: 50 FQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGF 97
>AL645939-6|CAI18086.2| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 30.7 bits (66), Expect = 7.4
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 839 FLWYLGCXGGSNVLGLRKCTEXRIFRTLFPCSPFTTFL*ALSALVTGF 696
F YLGC +VLG RK + I L+ + F T AL +L GF
Sbjct: 369 FQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGF 416
>AL022723-13|CAI20359.1| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 30.7 bits (66), Expect = 7.4
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 839 FLWYLGCXGGSNVLGLRKCTEXRIFRTLFPCSPFTTFL*ALSALVTGF 696
F YLGC +VLG RK + I L+ + F T AL +L GF
Sbjct: 369 FQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGF 416
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,010,119
Number of Sequences: 237096
Number of extensions: 1196362
Number of successful extensions: 4700
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4693
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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