Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_G22
         (910 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0352 - 33312443-33312652,33312747-33312854,33313224-333133...    32   0.72 
10_02_0097 + 5283306-5283683,5284618-5284758,5284928-5285074,528...    31   1.7  

>03_06_0352 -
           33312443-33312652,33312747-33312854,33313224-33313397,
           33313489-33313695,33313700-33313987,33314087-33314319,
           33314450-33315263
          Length = 677

 Score = 31.9 bits (69), Expect = 0.72
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = +3

Query: 627 LFTLTSAIFKIGHLKCTAIARALTSKPRRRQIVGSSTAASLKTTP 761
           LF L S    +      A A A T +PRRR++  +S+++S  ++P
Sbjct: 25  LFELPSVSISVSTASPAAAAAATTHRPRRRELEAASSSSSSSSSP 69


>10_02_0097 +
           5283306-5283683,5284618-5284758,5284928-5285074,
           5285226-5285378,5285509-5285644,5285740-5285840
          Length = 351

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 396 CGPCRELHYNLFSNSDRTSFCRN*KTTLV 310
           CGPC E+H++   N D  S   N   T +
Sbjct: 185 CGPCTEIHFDRVGNRDAASLVNNDDPTCI 213


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,886,066
Number of Sequences: 37544
Number of extensions: 359130
Number of successful extensions: 830
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)