Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_G22
         (910 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z11126-4|CAA77472.2|  180|Caenorhabditis elegans Hypothetical pr...    31   0.86 
U97013-4|AAB52339.1|  968|Caenorhabditis elegans Alanyl trna syn...    29   4.6  
U41660-1|AAA84420.1|  272|Caenorhabditis elegans AlaRS A protein.      29   4.6  
Z73424-3|CAA97781.2| 1150|Caenorhabditis elegans Hypothetical pr...    29   6.1  

>Z11126-4|CAA77472.2|  180|Caenorhabditis elegans Hypothetical
           protein ZK643.6 protein.
          Length = 180

 Score = 31.5 bits (68), Expect = 0.86
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -2

Query: 447 HLMIDAHGRQQCHCHASCGPCRELHYNLFSNSDRTSFCRN*KT 319
           HL+++        C A+CG C   + NL S+  +   C N KT
Sbjct: 21  HLLVNVTQHCLEKCPATCGKCNRKNANLCSDKSKPDICVNLKT 63


>U97013-4|AAB52339.1|  968|Caenorhabditis elegans Alanyl trna
           synthetase protein 2 protein.
          Length = 968

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 396 CGPCRELHYNLFSNSD 349
           CGPC E+HY+   N D
Sbjct: 184 CGPCSEIHYDRIGNRD 199


>U41660-1|AAA84420.1|  272|Caenorhabditis elegans AlaRS A protein.
          Length = 272

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 396 CGPCRELHYNLFSNSD 349
           CGPC E+HY+   N D
Sbjct: 184 CGPCSEIHYDRIGNRD 199


>Z73424-3|CAA97781.2| 1150|Caenorhabditis elegans Hypothetical
           protein C44B9.4 protein.
          Length = 1150

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = -1

Query: 517 LCSQSH*CDLSFYIAIKGKQGTGPPDDR--CSRTSAMPLSCQLWP 389
           LC +   C  SF++A  G + +  PDD   C+R   +P + +L+P
Sbjct: 72  LCCEQ--CPASFHLACIGYESSDLPDDNFYCNRCRNLPENVRLFP 114


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,278,554
Number of Sequences: 27780
Number of extensions: 321236
Number of successful extensions: 751
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 751
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)