Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_G22
         (910 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    23   3.8  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   3.8  
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    23   5.1  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    23   5.1  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    23   5.1  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    23   5.1  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   6.7  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -1

Query: 769 TQKGVVFSDAAVEDPTICLRRGFDVSALAIAVH 671
           +Q+G V +D  V + T  L RGF  + L   VH
Sbjct: 28  SQRGNVHNDPLVVETTSGLVRGFPRTVLDKEVH 60


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -1

Query: 769 TQKGVVFSDAAVEDPTICLRRGFDVSALAIAVH 671
           +Q+G V +D  V + T  L RGF  + L   VH
Sbjct: 28  SQRGNVHNDPLVVETTSGLVRGFPRTVLDKEVH 60


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +2

Query: 608 NDKGPYSLYVNVCDIQDRASKVH 676
           +DKGP  + +N  ++Q    ++H
Sbjct: 103 SDKGPEGIQINATELQKIKLEIH 125


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +2

Query: 608 NDKGPYSLYVNVCDIQDRASKVH 676
           +DKGP  + +N  ++Q    ++H
Sbjct: 103 SDKGPEGIQINATELQKIKLEIH 125


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +2

Query: 608 NDKGPYSLYVNVCDIQDRASKVH 676
           +DKGP  + +N  ++Q    ++H
Sbjct: 103 SDKGPEGIQINATELQKIKLEIH 125


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +2

Query: 608 NDKGPYSLYVNVCDIQDRASKVH 676
           +DKGP  + +N  ++Q    ++H
Sbjct: 103 SDKGPEGIQINATELQKIKLEIH 125


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 405 DNGIADVREHLSSGG 449
           D+G++DV    SSGG
Sbjct: 247 DSGVSDVESSTSSGG 261


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,593
Number of Sequences: 438
Number of extensions: 4448
Number of successful extensions: 34
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29509116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)