Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_G19
(903 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88; ... 98 2e-19
UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44; Fungi... 98 2e-19
UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79; Eukary... 91 3e-17
UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genom... 80 9e-14
UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1; ... 55 3e-06
UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiell... 41 0.050
UniRef50_Q5KA45 Cluster: Putative uncharacterized protein; n=1; ... 40 0.066
UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=... 37 0.61
UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_A0RZ36 Cluster: Ribosomal protein L44E; n=1; Cenarchaeu... 36 1.4
>UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88;
Eukaryota|Rep: 60S ribosomal protein L36a-like - Homo
sapiens (Human)
Length = 106
Score = 98.3 bits (234), Expect = 2e-19
Identities = 53/107 (49%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
Frame = +3
Query: 90 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKXKARCPGXEDGMIVNSRXYGGQSKPIFXXX 269
MVNVPK RRT+ +QYKK K G S YGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQS-GYGGQTKPIFRKK 59
Query: 270 XXXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 404
IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 60 AKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36a -
Homo sapiens (Human)
Length = 106
Score = 98.3 bits (234), Expect = 2e-19
Identities = 53/107 (49%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
Frame = +3
Query: 90 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKXKARCPGXEDGMIVNSRXYGGQSKPIFXXX 269
MVNVPK RRT+ +QYKK K G S YGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQS-GYGGQTKPIFRKK 59
Query: 270 XXXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 404
IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 60 AKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79;
Eukaryota|Rep: 60S ribosomal protein L44 -
Caenorhabditis elegans
Length = 105
Score = 91.5 bits (217), Expect = 3e-17
Identities = 49/106 (46%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Frame = +3
Query: 90 MVNVPKQRRTYXXXXXXXXXXXX-SQYKKSKXKARCPGXEDGMIVNSRXYGGQSKPIFXX 266
MVNVPK RRT+ +QYKK K G S +GGQ+KPIF
Sbjct: 1 MVNVPKARRTFCDGKCRKHTNHKVTQYKKGKESKFAQGRRRYDRKQS-GFGGQTKPIFRK 59
Query: 267 XXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKGQMIQF 404
IVLR+EC +CK + Q+ +KRCKHFELGG KK +GQ+IQF
Sbjct: 60 KAKTTKKIVLRMECTECKHKKQLPIKRCKHFELGGQKKSRGQVIQF 105
>UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genome
shotgun sequence; n=9; Eukaryota|Rep: Chromosome chr1
scaffold_5, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 151
Score = 79.8 bits (188), Expect = 9e-14
Identities = 45/101 (44%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Frame = +3
Query: 93 VNVPKQRRTYXXXXXXXXXXXX--SQYKKSKXKARCPGXEDGMIVNSRXYGGQSKPIFXX 266
VNVPK ++TY +QYKK K G S YGGQ+KP+F
Sbjct: 48 VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQS-GYGGQTKPVFHK 106
Query: 267 XXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 389
IVLRL+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 107 KAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 147
>UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 89
Score = 54.8 bits (126), Expect = 3e-06
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +3
Query: 288 IVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 389
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 52 IVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 85
>UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiella
natans|Rep: Ribosomal protein L44 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 99
Score = 40.7 bits (91), Expect = 0.050
Identities = 24/92 (26%), Positives = 36/92 (39%)
Frame = +3
Query: 90 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKXKARCPGXEDGMIVNSRXYGGQSKPIFXXX 269
MV P+ ++ Y +YK K G + YGGQ+KP+F
Sbjct: 1 MVKYPRNQKKYCKFCKVHVEMKSYEYKPGKASLNAQGKRR-YDRKQQGYGGQTKPVFRKQ 59
Query: 270 XXXXXXIVLRLECADCKVRSQVALKRCKHFEL 365
++L C CK +LKR K F++
Sbjct: 60 VKNTKKPSIKLSCEICKKEFIKSLKRTKRFQI 91
>UniRef50_Q5KA45 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 147
Score = 40.3 bits (90), Expect = 0.066
Identities = 26/48 (54%), Positives = 29/48 (60%)
Frame = +1
Query: 235 TVVSPNPSSKRRQKPLRKLCSVLSVPIAR*DHRLH*RDASTLSSVVTR 378
TVV P+ SS RR +P R+L SV S AR DAST SSVVTR
Sbjct: 55 TVVRPSLSSTRRLRPPRRLSSVSSALSARPSTNSPSSDASTSSSVVTR 102
>UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=1;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L44,
putative - Trichomonas vaginalis G3
Length = 104
Score = 37.1 bits (82), Expect = 0.61
Identities = 25/99 (25%), Positives = 39/99 (39%)
Frame = +3
Query: 90 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKXKARCPGXEDGMIVNSRXYGGQSKPIFXXX 269
MV+ PK ++ + SQ + + + G + +GG+ KPI
Sbjct: 1 MVHHPKTKKFFCKFCKKHTMCKVSQASRGEERHSALGRRR-YDRKQKGFGGRVKPILRRS 59
Query: 270 XXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRK 386
I LR C CK + L R + FE +KK+K
Sbjct: 60 KKTSKKISLRFTCQSCKKATMYCLGRLRKFEWTVEKKKK 98
>UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 76
Score = 36.3 bits (80), Expect = 1.1
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +3
Query: 336 ALKRCKHFELGGDKKRKG 389
+++RCKHFE+GGDKK KG
Sbjct: 55 SVQRCKHFEIGGDKKGKG 72
>UniRef50_A0RZ36 Cluster: Ribosomal protein L44E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L44E - Cenarchaeum
symbiosum
Length = 93
Score = 35.9 bits (79), Expect = 1.4
Identities = 26/87 (29%), Positives = 31/87 (35%)
Frame = +3
Query: 102 PKQRRTYXXXXXXXXXXXXSQYKKSKXKARCPGXEDGMIVNSRXYGGQSKPIFXXXXXXX 281
PKQ R Y S YK K +A G E + + YGGQ P
Sbjct: 4 PKQIRRYCPKCKKHTTQKVSIYKAGKRRASAIG-ERRHAEDKKGYGGQKFPKLAKPAKVT 62
Query: 282 XXIVLRLECADCKVRSQVALKRCKHFE 362
+ L C DCK + R K FE
Sbjct: 63 KKVTRLLTCPDCKKKFNTYGLRVKKFE 89
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 661,101,349
Number of Sequences: 1657284
Number of extensions: 10449025
Number of successful extensions: 18795
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 18294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18775
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81981722200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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