BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_G18
(914 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC047457-1|AAH47457.1| 798|Homo sapiens germ cell associated 2 ... 62 4e-09
BC016626-1|AAH16626.1| 773|Homo sapiens Unknown (protein for IM... 62 4e-09
AF289865-1|AAK30300.1| 798|Homo sapiens haploid germ cell-speci... 62 4e-09
AB039834-1|BAB21938.3| 798|Homo sapiens H-Haspin protein. 62 4e-09
>BC047457-1|AAH47457.1| 798|Homo sapiens germ cell associated 2
(haspin) protein.
Length = 798
Score = 61.7 bits (143), Expect = 4e-09
Identities = 33/82 (40%), Positives = 44/82 (53%)
Frame = +1
Query: 454 SNRVATARDYVLRRCNQTDAILFDECYPDALLKNCHKIGEGVYGEVFLWRARDGRARVMK 633
SN+ A+ + V C+Q + F C P L+ C KIGEGV+GEVF A D +K
Sbjct: 453 SNKKASDAEKVYGECSQKGPVPFSHCLPTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIK 511
Query: 634 IVPIAGHTKVNGEDQKDYHXII 699
I+ I G VNG QK + I+
Sbjct: 512 IIAIEGPDLVNGSHQKTFEEIL 533
>BC016626-1|AAH16626.1| 773|Homo sapiens Unknown (protein for
IMAGE:4524219) protein.
Length = 773
Score = 61.7 bits (143), Expect = 4e-09
Identities = 33/82 (40%), Positives = 44/82 (53%)
Frame = +1
Query: 454 SNRVATARDYVLRRCNQTDAILFDECYPDALLKNCHKIGEGVYGEVFLWRARDGRARVMK 633
SN+ A+ + V C+Q + F C P L+ C KIGEGV+GEVF A D +K
Sbjct: 453 SNKKASDAEKVYGECSQKGPVPFSHCLPTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIK 511
Query: 634 IVPIAGHTKVNGEDQKDYHXII 699
I+ I G VNG QK + I+
Sbjct: 512 IIAIEGPDLVNGSHQKTFEEIL 533
>AF289865-1|AAK30300.1| 798|Homo sapiens haploid germ cell-specific
nuclear protein kinase protein.
Length = 798
Score = 61.7 bits (143), Expect = 4e-09
Identities = 33/82 (40%), Positives = 44/82 (53%)
Frame = +1
Query: 454 SNRVATARDYVLRRCNQTDAILFDECYPDALLKNCHKIGEGVYGEVFLWRARDGRARVMK 633
SN+ A+ + V C+Q + F C P L+ C KIGEGV+GEVF A D +K
Sbjct: 453 SNKKASDAEKVYGECSQKGPVPFSHCLPTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIK 511
Query: 634 IVPIAGHTKVNGEDQKDYHXII 699
I+ I G VNG QK + I+
Sbjct: 512 IIAIEGPDLVNGSHQKTFEEIL 533
>AB039834-1|BAB21938.3| 798|Homo sapiens H-Haspin protein.
Length = 798
Score = 61.7 bits (143), Expect = 4e-09
Identities = 33/82 (40%), Positives = 44/82 (53%)
Frame = +1
Query: 454 SNRVATARDYVLRRCNQTDAILFDECYPDALLKNCHKIGEGVYGEVFLWRARDGRARVMK 633
SN+ A+ + V C+Q + F C P L+ C KIGEGV+GEVF A D +K
Sbjct: 453 SNKKASDAEKVYGECSQKGPVPFSHCLPTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIK 511
Query: 634 IVPIAGHTKVNGEDQKDYHXII 699
I+ I G VNG QK + I+
Sbjct: 512 IIAIEGPDLVNGSHQKTFEEIL 533
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,340,268
Number of Sequences: 237096
Number of extensions: 2222664
Number of successful extensions: 4104
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4100
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11881370308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -