Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_G18
(914 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98261-1|CAB10931.1| 920|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z71266-11|CAA95847.1| 920|Caenorhabditis elegans Hypothetical p... 33 0.28
Z71258-16|CAA95786.1| 920|Caenorhabditis elegans Hypothetical p... 33 0.28
AF408763-1|AAO27842.1| 459|Caenorhabditis elegans unknown prote... 33 0.28
Z22178-3|CAA80159.3| 1027|Caenorhabditis elegans Hypothetical pr... 30 2.7
AF192400-1|AAF24233.1| 1027|Caenorhabditis elegans emb-30 protei... 30 2.7
U80839-11|AAB37912.2| 261|Caenorhabditis elegans Hypothetical p... 29 4.6
L14745-8|AAA27923.1| 244|Caenorhabditis elegans Tetraspanin fam... 29 4.6
AC024751-3|AAK21513.2| 440|Caenorhabditis elegans Hypothetical ... 29 4.6
Z49131-2|CAA88975.1| 321|Caenorhabditis elegans Hypothetical pr... 29 6.1
U41549-1|AAA83281.1| 299|Caenorhabditis elegans Hypothetical pr... 28 8.1
>Z98261-1|CAB10931.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 33.1 bits (72), Expect = 0.28
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Frame = +1
Query: 400 LSLDDVEPEITVLGIHDTSNRV-ATARDYVLRRCNQTDAILFDECYPDALL-KNCHKIGE 573
+++ + +P I + D ++ + + +L Q ++ +D AL + K+GE
Sbjct: 537 MTIHNEDPSILPFYLEDLTSEIDPSPMMQLLHVVGQKESKTWDSLPKSALDGRRVKKLGE 596
Query: 574 GVYGEVF--LWRARDGRARVMKIVP 642
G YGEVF +W DG+ +KIVP
Sbjct: 597 GAYGEVFSTIW---DGKPVAIKIVP 618
>Z71266-11|CAA95847.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 33.1 bits (72), Expect = 0.28
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Frame = +1
Query: 400 LSLDDVEPEITVLGIHDTSNRV-ATARDYVLRRCNQTDAILFDECYPDALL-KNCHKIGE 573
+++ + +P I + D ++ + + +L Q ++ +D AL + K+GE
Sbjct: 537 MTIHNEDPSILPFYLEDLTSEIDPSPMMQLLHVVGQKESKTWDSLPKSALDGRRVKKLGE 596
Query: 574 GVYGEVF--LWRARDGRARVMKIVP 642
G YGEVF +W DG+ +KIVP
Sbjct: 597 GAYGEVFSTIW---DGKPVAIKIVP 618
>Z71258-16|CAA95786.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 33.1 bits (72), Expect = 0.28
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Frame = +1
Query: 400 LSLDDVEPEITVLGIHDTSNRV-ATARDYVLRRCNQTDAILFDECYPDALL-KNCHKIGE 573
+++ + +P I + D ++ + + +L Q ++ +D AL + K+GE
Sbjct: 537 MTIHNEDPSILPFYLEDLTSEIDPSPMMQLLHVVGQKESKTWDSLPKSALDGRRVKKLGE 596
Query: 574 GVYGEVF--LWRARDGRARVMKIVP 642
G YGEVF +W DG+ +KIVP
Sbjct: 597 GAYGEVFSTIW---DGKPVAIKIVP 618
>AF408763-1|AAO27842.1| 459|Caenorhabditis elegans unknown protein
protein.
Length = 459
Score = 33.1 bits (72), Expect = 0.28
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Frame = +1
Query: 400 LSLDDVEPEITVLGIHDTSNRV-ATARDYVLRRCNQTDAILFDECYPDALL-KNCHKIGE 573
+++ + +P I + D ++ + + +L Q ++ +D AL + K+GE
Sbjct: 245 MTIHNEDPSILPFYLEDLTSEIDPSPMMQLLHVVGQKESKTWDSLPKSALDGRRVKKLGE 304
Query: 574 GVYGEVF--LWRARDGRARVMKIVP 642
G YGEVF +W DG+ +KIVP
Sbjct: 305 GAYGEVFSTIW---DGKPVAIKIVP 326
>Z22178-3|CAA80159.3| 1027|Caenorhabditis elegans Hypothetical protein
F54C8.3 protein.
Length = 1027
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 328 MHLTLQYTGFLSDDCDDTIVGLSKLSLDDVEPEITVLGIHDTSNRVATARDYVLRR 495
+H T+Q +L DD SK+++ D++PE+ + ++ T RDY RR
Sbjct: 933 IHPTIQLAAYLHDDG-------SKITIGDMKPEVPPIADYEEKTVRKTFRDYQRRR 981
>AF192400-1|AAF24233.1| 1027|Caenorhabditis elegans emb-30 protein
protein.
Length = 1027
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 328 MHLTLQYTGFLSDDCDDTIVGLSKLSLDDVEPEITVLGIHDTSNRVATARDYVLRR 495
+H T+Q +L DD SK+++ D++PE+ + ++ T RDY RR
Sbjct: 933 IHPTIQLAAYLHDDG-------SKITIGDMKPEVPPIADYEEKTVRKTFRDYQRRR 981
>U80839-11|AAB37912.2| 261|Caenorhabditis elegans Hypothetical
protein ZC204.3 protein.
Length = 261
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 725 LSALRAPIADIERHFDEGNDTDAL 796
L AL P+A+ E+ F E DTDA+
Sbjct: 90 LVALETPLAEYEKMFSESEDTDAV 113
>L14745-8|AAA27923.1| 244|Caenorhabditis elegans Tetraspanin family
protein 1 protein.
Length = 244
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 407 SMMWNRRSPF*V-YMILRIVLLQLEITCYVDAIKR 508
S +W +R F + Y++L IVL+ LEI C V + R
Sbjct: 91 SSVWPKRKGFMITYLVLIIVLVSLEIGCGVAVLVR 125
>AC024751-3|AAK21513.2| 440|Caenorhabditis elegans Hypothetical
protein Y18H1A.10 protein.
Length = 440
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +1
Query: 484 VLRRCNQTDAILFDECYPDAL-LKNCHKIGEGVYGEVF--LWRARDGRARVMKIVP 642
+LR Q +A + AL + K+GEG YGEVF +W +GR +K++P
Sbjct: 83 LLRVVGQKEAKPWGSLPTSALDARKVKKLGEGAYGEVFSTVW---NGRPVAIKVLP 135
>Z49131-2|CAA88975.1| 321|Caenorhabditis elegans Hypothetical
protein ZC373.3 protein.
Length = 321
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 550 KNCHKIGEGVYGEVFLWRARDG-RARVMKIVPIAGHTKVNGEDQKD 684
K HK+G G +GEV W+A D V KIV I + V G +D
Sbjct: 37 KLIHKVGSGSFGEV--WQATDKLEGNVAKIVKII-NKYVGGSGPRD 79
>U41549-1|AAA83281.1| 299|Caenorhabditis elegans Hypothetical
protein F22F1.2 protein.
Length = 299
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 562 KIGEGVYGEVFLWR-ARDGRARVMKIVPIAGHTKVNG 669
K+GEG YG+V+ R R+ + V+K++ H ++NG
Sbjct: 16 KLGEGSYGDVYFCRDERNNKWSVIKLI----HKEING 48
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,679,027
Number of Sequences: 27780
Number of extensions: 372895
Number of successful extensions: 974
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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