Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_G15
(894 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0257 + 11145558-11145876,11148181-11148347,11149114-111493... 205 3e-53
03_05_0228 - 22137771-22138016,22138109-22138306,22138852-221390... 205 3e-53
06_02_0082 + 11536799-11537554,11538210-11538334,11538507-11538687 31 0.014
05_02_0037 + 5883285-5884292 31 0.94
03_05_0826 - 27994004-27994966,27995053-27996030,27996101-27996478 31 1.2
01_01_0652 + 4975091-4975585 29 3.8
06_03_0191 - 17720512-17721435,17721718-17721843,17721940-177221... 29 5.0
04_03_0196 - 12533947-12534470,12536577-12537039,12537673-12537903 29 5.0
>05_03_0257 +
11145558-11145876,11148181-11148347,11149114-11149311,
11149405-11149650
Length = 309
Score = 205 bits (501), Expect = 3e-53
Identities = 102/196 (52%), Positives = 125/196 (63%), Gaps = 1/196 (0%)
Frame = +3
Query: 129 TELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXXXXXXXXX 308
+EL+R+K SDVMRF+ RVR W+YRQ + R RPTRPDKARRLGY+AKQ
Sbjct: 113 SELWRRKQSDVMRFVQRVRCWEYRQQPAIVRLTRPTRPDKARRLGYKAKQGYVVYRVRVR 172
Query: 309 XXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSY 488
YGKPK G+ QLK RN +S+AEE +SYWV +DS+Y
Sbjct: 173 RGGRKRPVPKGIVYGKPKHQGITQLKFQRNKRSVAEERAGRKLGGLRVLNSYWVNEDSTY 232
Query: 489 KYFEVILVDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRGL-GKGHRYSQTKGG 665
KYFE+ILVD +H AIR DP+INW+ VHKHRE+RGLTSAG+ RGL GKGH + + +
Sbjct: 233 KYFEIILVDVAHSAIRNDPRINWLCKPVHKHRELRGLTSAGKKYRGLRGKGHTHHKAR-P 291
Query: 666 SRRAXWLXRXTLQLRR 713
SRRA W T+ LRR
Sbjct: 292 SRRATWKRNQTVSLRR 307
>03_05_0228 -
22137771-22138016,22138109-22138306,22138852-22139018,
22139129-22139132
Length = 204
Score = 205 bits (501), Expect = 3e-53
Identities = 102/196 (52%), Positives = 125/196 (63%), Gaps = 1/196 (0%)
Frame = +3
Query: 129 TELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXXXXXXXXX 308
+EL+R+K SDVMRF+ RVR W+YRQ + R RPTRPDKARRLGY+AKQ
Sbjct: 8 SELWRRKQSDVMRFVQRVRCWEYRQQPAIVRLTRPTRPDKARRLGYKAKQGYVVYRVRVR 67
Query: 309 XXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSY 488
YGKPK G+ QLK RN +S+AEE +SYWV +DS+Y
Sbjct: 68 RGGRKRPVPKGIVYGKPKHQGITQLKFQRNKRSVAEERAGRKLGGLRVLNSYWVNEDSTY 127
Query: 489 KYFEVILVDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRGL-GKGHRYSQTKGG 665
KYFE+ILVD +H AIR DP+INW+ VHKHRE+RGLTSAG+ RGL GKGH + + +
Sbjct: 128 KYFEIILVDVAHSAIRNDPRINWLCKPVHKHRELRGLTSAGKKYRGLRGKGHTHHKAR-P 186
Query: 666 SRRAXWLXRXTLQLRR 713
SRRA W T+ LRR
Sbjct: 187 SRRATWKRNQTVSLRR 202
>06_02_0082 + 11536799-11537554,11538210-11538334,11538507-11538687
Length = 353
Score = 31.5 bits (68), Expect(2) = 0.014
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3
Query: 495 FEVILVDPSHKAIRRDPK 548
FE+ILVD +H AIR DPK
Sbjct: 299 FEIILVDVAHSAIRDDPK 316
Score = 25.0 bits (52), Expect(2) = 0.014
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 348 YGKPKSHGVNQLKPTRN 398
Y KPK G+ QLK RN
Sbjct: 276 YSKPKHQGITQLKFQRN 292
>05_02_0037 + 5883285-5884292
Length = 335
Score = 31.5 bits (68), Expect = 0.94
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +2
Query: 191 AVPSVDSYAPRSQAHKAGQSPKTRLP---C*TRLCCIQNPCATWWPQASSC*GC 343
AV ++ AP ++ +A +SP C R CC +P + WWP+ GC
Sbjct: 271 AVFPTEAAAPATEGKEAAKSPDAAAQGGWCLFR-CCWPSPPSVWWPRCGCGGGC 323
>03_05_0826 - 27994004-27994966,27995053-27996030,27996101-27996478
Length = 772
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = -2
Query: 419 FLSNGLKVARGLQLVDTMALGLAISGTLSNWTLAATTSHTDSE 291
+++ G +V G++ V +ALGL ++GT W L T +D++
Sbjct: 587 YVALGSEVPLGVEKVHELALGLELAGTRFLWALRKPTGVSDAD 629
>01_01_0652 + 4975091-4975585
Length = 164
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 603 SAGRSSRGLGKGHRYSQTKGGSRRAXW 683
+AG+ GKG R + +GG RR W
Sbjct: 37 AAGKRREAAGKGGRQREARGGGRRMRW 63
>06_03_0191 - 17720512-17721435,17721718-17721843,17721940-17722140,
17722189-17722332,17722415-17722722,17723433-17723568,
17723748-17723841,17723976-17724073,17724951-17725004,
17725704-17726150,17726227-17726393,17726540-17726663,
17726751-17726837,17727000-17727056,17727492-17727560,
17727664-17727811,17727893-17728116,17728842-17728958,
17729649-17729742,17730573-17730640,17733278-17733334,
17733412-17733511,17733638-17733674,17734077-17734200,
17735254-17735322,17735371-17735410,17735905-17735993,
17736849-17736953,17737033-17737104,17737814-17737936,
17738049-17738117,17738966-17739059,17739145-17739231,
17740184-17740351,17740436-17740552,17741484-17741590,
17741671-17741803,17742564-17742667,17743504-17743629,
17744148-17744216,17744996-17745064,17745278-17745358,
17745444-17745533,17745896-17746000,17747803-17747873,
17748320-17748461,17749266-17749330,17750081-17750168,
17750236-17750325,17750437-17750673,17751064-17751170,
17751625-17751832,17752376-17752546
Length = 2366
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = -2
Query: 746 SLTVLDRCLXFAT*LKSVAXEPXCPA*ASLCLRVSMSLAETSGAATSRSQTTHL 585
S++V+D CL S+A CP A++ L ++ + S +AT + T +
Sbjct: 1969 SVSVIDECLKLLFLFHSLAQSKKCPQEATMLLLDALLMVFYSSSATGSQELTEV 2022
>04_03_0196 - 12533947-12534470,12536577-12537039,12537673-12537903
Length = 405
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3
Query: 543 PKINWIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAXWL 686
P+++ VH+ RG ++AG R G S G SRRA WL
Sbjct: 264 PRVSGTKRPVHRGLGPRGWSTAGPRDRRSGSASGRSDGAGSSRRA-WL 310
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,070,406
Number of Sequences: 37544
Number of extensions: 461786
Number of successful extensions: 1095
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1090
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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