Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_G04
(882 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 250 2e-67
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 141 1e-34
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 134 1e-32
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 87 2e-18
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 68 2e-12
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 58 2e-09
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 54 2e-08
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 52 8e-08
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 47 4e-06
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 36 0.008
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.094
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 31 0.16
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 29 0.66
SPBC4C3.12 |sep1||fork head transcription factor Sep1|Schizosacc... 29 1.2
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 29 1.2
SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur... 27 3.5
SPCC306.02c |||Rab GTPase binding |Schizosaccharomyces pombe|chr... 27 3.5
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 3.5
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 27 3.5
SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|... 27 4.7
SPAC222.09 |seb1||RNA-binding protein Seb1 |Schizosaccharomyces ... 27 4.7
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 27 4.7
SPAC1751.01c |gti1||gluconate transporter inducer Gti1|Schizosac... 26 6.2
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 6.2
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 26 6.2
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 26 6.2
SPBC2G2.16 |||mannose-6-phosphate isomerase |Schizosaccharomyces... 26 8.2
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 26 8.2
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 26 8.2
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 250 bits (613), Expect = 2e-67
Identities = 143/231 (61%), Positives = 159/231 (68%), Gaps = 10/231 (4%)
Frame = +1
Query: 166 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGKAPPSG-------RDGRYGTEGLLC 324
+EE+AALV+DNGSGMCKAGFAGDDAPRAVFPS G+ G +D G E
Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQSK 61
Query: 325 RR*GTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLLQ*AACRPRGTPSPAH*XL---PS 495
R G +YP I H N + +D+ R P L P
Sbjct: 62 R--GILTLKYP---IEHGIVN------NWDDMEKIWHHTFYNELRVAPEEHPCLLTEAPL 110
Query: 496 TPRANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDXGDGVSHTVPIYEGYA 675
P++NREKMTQI+FETFN PA YVAIQAVLSLYASGRTTGIVLD GDGV+HTVPIYEGYA
Sbjct: 111 NPKSNREKMTQIIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYA 170
Query: 676 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIXEKLCXVAL 828
LPHAI+RLDLAGRDLTDYLMKIL ERGY+F+TTAEREIVRDI EKLC VAL
Sbjct: 171 LPHAIMRLDLAGRDLTDYLMKILMERGYTFSTTAEREIVRDIKEKLCYVAL 221
Score = 165 bits (401), Expect = 7e-42
Identities = 73/87 (83%), Positives = 76/87 (87%)
Frame = +2
Query: 257 PRIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 436
P IVGRPRH G+MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFY
Sbjct: 32 PSIVGRPRHHGIMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFY 91
Query: 437 NELRVAPEEHPVLLTEXSPQPQGPTER 517
NELRVAPEEHP LLTE P+ E+
Sbjct: 92 NELRVAPEEHPCLLTEAPLNPKSNREK 118
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 141 bits (342), Expect = 1e-34
Identities = 88/229 (38%), Positives = 129/229 (56%), Gaps = 10/229 (4%)
Frame = +1
Query: 184 LVVDNGSGMCKAGFAGDDAPRAVFPSXRG-----KAPPSG--RDGRYGTEGLLCRR*GTE 342
+ +DNGSG KAGFAGDD P+ +FP+ G + PS +D G+E R
Sbjct: 12 ICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFVGSEAQNLRGLLKI 71
Query: 343 QKRYPDPQIPHRTRNRH*LG*HGEDLASYLLQ*AACRPRGTPSPAH*XLPSTPRAN---R 513
Q+ I + + E++ SY+ P L P AN +
Sbjct: 72 QRPIERGIIQNWS--------DMEEIWSYIYSDQQLNTLPEEHPL--LLTEPPLANIRNK 121
Query: 514 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDXGDGVSHTVPIYEGYALPHAIL 693
EK+ + +ET N PA+ ++Q VL+LYAS RTTGIVL+ GDG++H+VPIY+G+++P AI
Sbjct: 122 EKIAEYFYETLNVPALSFSLQPVLALYASARTTGIVLECGDGLTHSVPIYDGFSIPSAIQ 181
Query: 694 RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIXEKLCXVALXXRA 840
+ ++ GRD+TDYL L + G+ ++AE+EIVR+I EK C VA R+
Sbjct: 182 QEEIGGRDVTDYLQLQLRKSGHELVSSAEKEIVREIKEKCCYVASDFRS 230
Score = 89.0 bits (211), Expect = 8e-19
Identities = 40/77 (51%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Frame = +2
Query: 257 PRIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 436
P VGR +H+ VM QKD +VG EAQ+ RG+L ++ PIE GI+ NW DME+IW + +
Sbjct: 36 PTCVGRIKHERVMPSSIQKDMFVGSEAQNLRGLLKIQRPIERGIIQNWSDMEEIWSYIYS 95
Query: 437 N-ELRVAPEEHPVLLTE 484
+ +L PEEHP+LLTE
Sbjct: 96 DQQLNTLPEEHPLLLTE 112
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 134 bits (325), Expect = 1e-32
Identities = 62/112 (55%), Positives = 81/112 (72%)
Frame = +1
Query: 490 PSTPRANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDXGDGVSHTVPIYEG 669
P P ANREKM + MFE + +YVAIQAVLSLYA G ++G+V+D GDGV+H VP+YE
Sbjct: 109 PMNPVANREKMCETMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVPVYES 168
Query: 670 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIXEKLCXVA 825
L H + RLD+AGRD T YL+ +L +GY+F TA+ E VR++ EKLC V+
Sbjct: 169 VVLNHLVGRLDVAGRDATRYLISLLLRKGYAFNRTADFETVREMKEKLCYVS 220
Score = 73.7 bits (173), Expect = 3e-14
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Frame = +2
Query: 257 PRIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHT 430
P IVGRP R + + KD VGDEA++ R +L +KYP+E+GI+ ++++M ++W +T
Sbjct: 30 PSIVGRPILRAEEKTGNVQIKDVMVGDEAEAVRSLLQVKYPMENGIIRDFEEMNQLWDYT 89
Query: 431 FYNELRVAPEEHPVLLTEXSPQPQGPTER 517
F+ +L++ P +LLTE P E+
Sbjct: 90 FFEKLKIDPRGRKILLTEPPMNPVANREK 118
Score = 39.1 bits (87), Expect = 8e-04
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +1
Query: 172 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 273
E A +V+DNG+G K G+A D+ PR FPS G+
Sbjct: 2 ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGR 35
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 87.4 bits (207), Expect = 2e-18
Identities = 51/121 (42%), Positives = 71/121 (58%), Gaps = 10/121 (8%)
Frame = +1
Query: 490 PSTPRANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDXGDGVS 645
P P NRE +IMFE+FN +Y+A+QAVL+L AS + TG V+D GDGV+
Sbjct: 132 PLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVT 191
Query: 646 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGY--SFTTTAEREIVRDIXEKLCX 819
H +P+ EGY + +I + LAGRD+T ++ +L +R S TAER I E+ C
Sbjct: 192 HIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEPDSSLKTAER-----IKEECCY 246
Query: 820 V 822
V
Sbjct: 247 V 247
Score = 61.3 bits (142), Expect = 2e-10
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +2
Query: 314 DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXS 490
D ++G++A K +L YPI HG + NWD ME+ W + + LR PE+H LLTE
Sbjct: 73 DFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTE-- 130
Query: 491 PQPQGPTERR 520
P P E R
Sbjct: 131 -PPLNPPENR 139
Score = 38.3 bits (85), Expect = 0.001
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +1
Query: 184 LVVDNGSGMCKAGFAGDDAPRAVFPS 261
+++DNG+G K G+AG+DAP VFP+
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPT 33
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 68.1 bits (159), Expect = 2e-12
Identities = 57/199 (28%), Positives = 88/199 (44%), Gaps = 2/199 (1%)
Frame = +1
Query: 169 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGKAPPSGRDGRYGTEGLLCRR*GTEQK 348
+EV+A+V+D GS + GF+G+D P+ V PS G+ R +G E + K
Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGEFSDGRR--LFGEEYIY--------K 58
Query: 349 RYPDPQIPHRTRNRH*LG*HGE-DLASYLLQ*AACRPRGTPSPAH*XLP-STPRANREKM 522
P +I + RN DL Y L+ + P P P NR K
Sbjct: 59 SNPGMEIKNAIRNGWVENWDVTVDLWRYGLE-QQLKTNPLEHPILITEPFDNPPENRVKT 117
Query: 523 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDXGDGVSHTVPIYEGYALPHAILRLD 702
+ MFE+ PA Y+A Q + +ASG+ T ++D G S IY+G+ L
Sbjct: 118 LETMFESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVLQKGYQVQH 177
Query: 703 LAGRDLTDYLMKILTERGY 759
+G + D L + L ++ +
Sbjct: 178 FSGNAINDILAQTLRDKNF 196
Score = 42.7 bits (96), Expect = 7e-05
Identities = 24/74 (32%), Positives = 34/74 (45%)
Frame = +2
Query: 356 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXSPQPQGPTERR*PRSC 535
+ +K I +G V NWD +W + +L+ P EHP+L+TE P P R
Sbjct: 63 MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNP--PENRVKTLET 120
Query: 536 SKHSTRPPCTSPSK 577
S R P T +K
Sbjct: 121 MFESLRCPATYLAK 134
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 58.0 bits (134), Expect = 2e-09
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 7/201 (3%)
Frame = +1
Query: 184 LVVDNGSGMCKAGFAGDDAPRAVFPSXRGKAPPSGRDGRYGTEGLLCRR*GTEQK-RYPD 360
LV+DNGS +AG+ G+ P+ VF + + RD + L G +
Sbjct: 27 LVIDNGSWQLRAGWGGEKDPKLVFDNLVSRY----RDRKLSRTSTLV---GNDTLIEVGS 79
Query: 361 PQIPHRTRNRH*LG*HGEDLASYLLQ*AACRPRGTPSPAH*XLPSTPRAN----REKMTQ 528
I R+ + DL +L + G H + P AN R MT+
Sbjct: 80 RSIARSPFERNVIS--NWDLMEQVLDYTFLK-LGIDRMEHPICMTEPLANPTYVRSTMTE 136
Query: 529 IMFETFNTPAMYVAIQAVLSLYASGR--TTGIVLDXGDGVSHTVPIYEGYALPHAILRLD 702
++FE +N P++ I + S Y + + ++GIVL+ G+ SH +P+ G + R+
Sbjct: 137 LLFELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIPVLNGERILSEAKRIS 196
Query: 703 LAGRDLTDYLMKILTERGYSF 765
G + YL+K+ + SF
Sbjct: 197 WGGSQSSSYLLKLFQIKYPSF 217
Score = 40.3 bits (90), Expect = 4e-04
Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +2
Query: 302 MGQKDSYVGDEAQSKRGILTL-KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 478
+ + + VG++ + G ++ + P E +++NWD ME++ +TF +L + EHP+ +
Sbjct: 62 LSRTSTLVGNDTLIEVGSRSIARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICM 120
Query: 479 TEXSPQP 499
TE P
Sbjct: 121 TEPLANP 127
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 54.4 bits (125), Expect = 2e-08
Identities = 31/100 (31%), Positives = 49/100 (49%)
Frame = +1
Query: 508 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDXGDGVSHTVPIYEGYALPHA 687
+RE TQ FE P +A + ++ LYA G G+V+D G + PI +G + A
Sbjct: 161 DRELATQFFFEECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDGQIIFTA 220
Query: 688 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIXE 807
+L L GR +T +L +L E + ++ + DI E
Sbjct: 221 TQQLPLGGRYMTQHLQNLLRESLPTLKSSGQYVSKEDITE 260
Score = 25.8 bits (54), Expect = 8.2
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2
Query: 371 PIEHGIVTNWDDMEKIWHHTF 433
PI+ G V +W+ ++ W H +
Sbjct: 113 PIQRGRVVDWEALKAFWKHLY 133
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 52.4 bits (120), Expect = 8e-08
Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 5/204 (2%)
Frame = +1
Query: 169 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRG-KAPPSGRDGRYGTEGLLCRR*GTEQ 345
EE+ +LV+D GS + G+AG+++P + PS G ++ +GR+ +Y + L Q
Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPSYYGVRSDVTGRN-KYVVDEL--------Q 58
Query: 346 KRYPDPQIPHRTRNRH*LG*HGEDLASYLLQ*AACRPRGTPSPAH*XLPSTPRANREKM- 522
P P + + + + E Y + + + + P N + +
Sbjct: 59 IHAPIPGMEVKNGKSNGIIQDWES-TLYTWERGLKEKLQVNPTEYAMMITEPSWNPQSVR 117
Query: 523 TQIM---FETFNTPAMYVAIQAVLSLYASGRTTGIVLDXGDGVSHTVPIYEGYALPHAIL 693
QIM FE + PA Y+ QAV +A+ ++T +++D G + P+ +G + I
Sbjct: 118 QQIMEAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDIGSDNASVTPVVDGLIIRKGIF 177
Query: 694 RLDLAGRDLTDYLMKILTERGYSF 765
+ LAG L + ++ F
Sbjct: 178 KQSLAGDFLNANIEQLFNTMNIEF 201
Score = 41.9 bits (94), Expect = 1e-04
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = +2
Query: 275 PRHQGVMVGMGQKDSYVGDEAQSKRGI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 448
P + GV + ++ YV DE Q I + +K +GI+ +W+ W +L+
Sbjct: 37 PSYYGVRSDVTGRNKYVVDELQIHAPIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQ 96
Query: 449 VAPEEHPVLLTEXSPQPQ 502
V P E+ +++TE S PQ
Sbjct: 97 VNPTEYAMMITEPSWNPQ 114
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 46.8 bits (106), Expect = 4e-06
Identities = 22/70 (31%), Positives = 41/70 (58%)
Frame = +1
Query: 616 IVLDXGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 795
+V+D G +H +P+ + A+ R+D+ G+ LT+YL ++++ R Y+ E IV
Sbjct: 159 LVIDSGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYLKEVISYRKYNM--MEETYIVN 216
Query: 796 DIXEKLCXVA 825
+I E +C V+
Sbjct: 217 EIKESVCYVS 226
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 35.9 bits (79), Expect = 0.008
Identities = 17/84 (20%), Positives = 42/84 (50%)
Frame = +1
Query: 514 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDXGDGVSHTVPIYEGYALPHAIL 693
EK+ I+F + + +++ + + +G + V+D G + + EG +P++ +
Sbjct: 260 EKILDILFFDLHFGKAAIVQESLCTSFGAGMSAACVVDMGAQKTSISCVEEGVVVPNSRI 319
Query: 694 RLDLAGRDLTDYLMKILTERGYSF 765
+++ G D+T MK+L + +
Sbjct: 320 KINYGGDDITLLFMKLLMRSHFPY 343
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.3 bits (70), Expect = 0.094
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +2
Query: 557 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 691
P T+P P T PV P S P+ P P PS++ P PS
Sbjct: 1037 PSTAPPVPIPTSTPPV-PKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080
Score = 28.3 bits (60), Expect = 1.5
Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Frame = +2
Query: 554 PPCTSPSKPCSRCTRPVVPPVSCWTP-----ATVSPTPCPSTKDTHSPTPS 691
PP +P P P VPP S P A + P P P+ K P PS
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPS 1243
Score = 26.6 bits (56), Expect = 4.7
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = +2
Query: 554 PPCTSPSKPCSRCTRP--VVPPVSCWTPATVSPTPCPSTKDTHSPTPS 691
PP PS +P VPPV P+ P P PS P PS
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPA--PSGAPPVPKPSVAAPPVPVPS 1137
Score = 25.8 bits (54), Expect = 8.2
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = +2
Query: 554 PPCTSPSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTKDTHSPTPS 691
PP +PS +P VPPV P+ P P PS P PS
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVP--PPSEAPPVPKPSVGVPPVPPPS 1214
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 31.5 bits (68), Expect = 0.16
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 530 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSPTPS 691
SC+ ++ PP T S S P VPP S T + PT ST SP P+
Sbjct: 171 SCTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 224
Score = 30.3 bits (65), Expect = 0.38
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 530 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSPTPS 691
SC+ ++ PP T S S P VPP S T + PT ST +P P+
Sbjct: 114 SCTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPT 167
Score = 28.7 bits (61), Expect = 1.2
Identities = 22/71 (30%), Positives = 30/71 (42%)
Frame = +2
Query: 479 TEXSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCP 658
T S P PT P S S ST PP S S + + + SC T ++ PT
Sbjct: 348 TGNSTTPVTPTVP--PTSTSSTSTPPPPASTSSTGTSSSPLLSTSTSCTTSTSIPPTGNS 405
Query: 659 STKDTHSPTPS 691
+T T + P+
Sbjct: 406 TTPVTPTVPPT 416
Score = 27.9 bits (59), Expect = 2.0
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +2
Query: 530 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSPTPS 691
SC+ ++ P T S S P VPP S T + PT ST SP P+
Sbjct: 228 SCTTSTSIP--TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 280
Score = 27.9 bits (59), Expect = 2.0
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 530 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC-PSTKDTHSPTP 688
SC+ ++ PP + + P + P VPP S TP T T C ST ++ TP
Sbjct: 392 SCTTSTSIPPTGNSTTPVT----PTVPPTSSSTPLTT--TNCTTSTSVPYTSTP 439
Score = 27.5 bits (58), Expect = 2.7
Identities = 22/71 (30%), Positives = 29/71 (40%)
Frame = +2
Query: 479 TEXSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCP 658
T S P PT P S S ST PP S S + + SC T ++ PT
Sbjct: 294 TGNSTTPVTPTVP--PTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNS 351
Query: 659 STKDTHSPTPS 691
+T T + P+
Sbjct: 352 TTPVTPTVPPT 362
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 29.5 bits (63), Expect = 0.66
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +2
Query: 578 PCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP 682
PC+ + PPV+C TP P C K H P
Sbjct: 621 PCTCGRTRLYPPVACGTPIPDCPYLCVLPKSCHHP 655
>SPBC4C3.12 |sep1||fork head transcription factor
Sep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 663
Score = 28.7 bits (61), Expect = 1.2
Identities = 23/75 (30%), Positives = 36/75 (48%)
Frame = +2
Query: 434 YNELRVAPEEHPVLLTEXSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPP 613
Y+EL +A +E P L P P+ ++ + + K + S KP S+ TRP +P
Sbjct: 23 YSELPIAYQEIP--LQSLPPYPKVASKLKGVVAGGKENN---IASFQKPSSKATRPYIPS 77
Query: 614 VSCWTPATVSPTPCP 658
+ T +V P P P
Sbjct: 78 YTRLT-YSVPPLPIP 91
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 28.7 bits (61), Expect = 1.2
Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 1/90 (1%)
Frame = +2
Query: 416 IWHHTFYNELRVAPEEHPVLLTEXSPQPQGPTERR*PRS-CSKHSTRPPCTSPSKPCSRC 592
I +H + + P P +P P P S S+H + +PS +
Sbjct: 203 IHNHPYSSPTSYPPPLCPATYCPSNPPQLAPATAIAPSSQSSQHKSVNYSVTPSSINNHT 262
Query: 593 TRPVVPPVSCWTPATVSPTPCPSTKDTHSP 682
P+ P ++ W P T PT P + + + P
Sbjct: 263 AVPLSPTLAVWLPMT-QPTFQPPSANVYQP 291
>SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin
deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 398
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 578 PCSRCTRPVVPPVSCWTPATVSPTPCPST 664
P SR T+P+ S +P VSP PST
Sbjct: 262 PVSRLTQPLPSLASTASPQQVSPPAAPST 290
>SPCC306.02c |||Rab GTPase binding |Schizosaccharomyces pombe|chr
3|||Manual
Length = 171
Score = 27.1 bits (57), Expect = 3.5
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 493 STPRANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDXGDGV 642
S PR E ++I F + Y+AI A+L +YA R +++ G GV
Sbjct: 42 SRPRNFSEAQSRISFNFSRFSSNYLAIIAMLVIYALIRNPLLLIVIGIGV 91
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +2
Query: 524 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP 682
P S S+ + PP P+ P + P +PP+ + + P P P + +P
Sbjct: 378 PLSSSRAVSNPPAPPPAIPGR--SAPALPPLGNASRTSTPPVPTPPSLPPSAP 428
Score = 26.6 bits (56), Expect = 4.7
Identities = 21/81 (25%), Positives = 28/81 (34%)
Frame = +2
Query: 446 RVAPEEHPVLLTEXSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCW 625
R AP P+ + P PT P S + PP PS P P +PP +
Sbjct: 398 RSAPALPPLGNASRTSTPPVPTPPSLPPSAPP--SLPPSAPPSLPMGAPAAPPLPPSAPI 455
Query: 626 TPATVSPTPCPSTKDTHSPTP 688
P + P +P P
Sbjct: 456 APPLPAGMPAAPPLPPAAPAP 476
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +2
Query: 554 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 661
PP P + T PV PV+ A P P P+
Sbjct: 367 PPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPA 402
>SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 194
Score = 26.6 bits (56), Expect = 4.7
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = +3
Query: 594 RVRSYHRYRAGXRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDPH 746
R RS HR+ G RR P+R HL R RH + R R H
Sbjct: 142 RTRSNHRH--GSHRRHEPYRTHLSRHH---RHSTTNYHSKRDDRYERRREH 187
>SPAC222.09 |seb1||RNA-binding protein Seb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 26.6 bits (56), Expect = 4.7
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 451 RPRGTPSPAH*XLPST 498
RPR +PSP+H +PST
Sbjct: 356 RPRRSPSPSHLSIPST 371
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 26.6 bits (56), Expect = 4.7
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = -2
Query: 317 SPSVPYRPSRPDGGAFPRXEGNTARGASSPAKPALHIPEP 198
+P VP P RP P R A AL +P+P
Sbjct: 538 APEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPEALSVPQP 577
>SPAC1751.01c |gti1||gluconate transporter inducer
Gti1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 26.2 bits (55), Expect = 6.2
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = -2
Query: 347 FCSVPHLLHKSPSVPYRPSRPDGGAFPRXEGNTARGASSPAKPALHIPEPLSTTNAATSS 168
F S+P + K P+ P P + + A +S+P P P+ + ++TSS
Sbjct: 193 FSSLPLVSSKPTGTPFVPKSPPSSSPSTTNVSNASTSSAPINP--RAPQTRRESISSTSS 250
Query: 167 SH 162
H
Sbjct: 251 IH 252
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 6.2
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +2
Query: 455 PEEHPVLLTEXSPQPQGPTERR*PRSCSKHSTRPPCTSPSK--PCSRCTRPVVPPVSCWT 628
P P + E +P P P + ++ S +TRP T+P K + +PV P +
Sbjct: 893 PAPIPAPVAEPAP-PAAPAKEVVEKAPSPPATRPKSTTPQKFDDDAWANKPVTEPPVRAS 951
Query: 629 PATVSP 646
TV P
Sbjct: 952 SVTVEP 957
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 26.2 bits (55), Expect = 6.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 338 VPHLLHKSPSVPYRPSRPDGGA 273
+ L+ K+PS PY SRP A
Sbjct: 306 IDQLISKAPSYPYSSSRPSASA 327
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 26.2 bits (55), Expect = 6.2
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +2
Query: 506 PTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSP 682
PT + +S P SP+ P T P P S ++P + S +P T ++SP
Sbjct: 1580 PTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSP---TSPSYSP 1636
Query: 683 T 685
T
Sbjct: 1637 T 1637
>SPBC2G2.16 |||mannose-6-phosphate isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 412
Score = 25.8 bits (54), Expect = 8.2
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +3
Query: 558 HVRRHPSRALAVRVRSYHRYRAGXRRRCLPHRAHLRRIRTPPR 686
+VR HP A+ +R H Y +G C+ ++ R+ P+
Sbjct: 248 YVRLHPGEAVFLRALDPHAYVSGNIIECMAASDNVIRLGFTPK 290
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 367 FEGQDTSFALCLISYIRVLLSHTDHHA 287
+EG+DT+ +Y+R++L TD A
Sbjct: 74 YEGEDTTRITRFANYLRIILPGTDQKA 100
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 25.8 bits (54), Expect = 8.2
Identities = 17/72 (23%), Positives = 33/72 (45%)
Frame = +3
Query: 519 DDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGXRRRCLPHRAHLRRIRTPPRHPAS 698
++ D++R++ +RH RR P +A + R H + R R ++ R + ++
Sbjct: 1437 ENNDNLRSV--SRHTRREPQQAQNLNARREHESQKSDRWR---QNGNVNRNPRVSNNNST 1491
Query: 699 GLSRSRPHRLPH 734
+SR R H
Sbjct: 1492 NVSRERSSEANH 1503
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,559,249
Number of Sequences: 5004
Number of extensions: 80224
Number of successful extensions: 303
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 293
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 442483990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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