SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_G04
         (882 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    25   0.70 
DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex det...    25   0.92 
DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex det...    25   0.92 
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    23   3.7  
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    23   4.9  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    22   6.5  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   6.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   6.5  
DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex det...    22   8.6  
DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex det...    22   8.6  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    22   8.6  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    22   8.6  

>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 25.4 bits (53), Expect = 0.70
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +2

Query: 395 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEXSPQPQGP 508
           N+++ +K++++  Y E    P   P+      P+P GP
Sbjct: 110 NYNNYKKLYYNINYIEQIPVPVPVPIYCGNFPPRPMGP 147


>DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 25.0 bits (52), Expect = 0.92
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +2

Query: 395 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEXSPQPQGP 508
           N+++ +K++++  Y E    P   P+      P+P GP
Sbjct: 102 NYNNYKKLYYNINYIEQIPIPVPVPIYCGNFPPRPMGP 139


>DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 25.0 bits (52), Expect = 0.92
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +2

Query: 395 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEXSPQPQGP 508
           N+++ +K++++  Y E    P   P+      P+P GP
Sbjct: 100 NYNNYKKLYYNINYIEQVPVPIPVPIYCGNFPPRPMGP 137


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 9/38 (23%), Positives = 19/38 (50%)
 Frame = +2

Query: 395 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEXSPQPQGP 508
           N+++ +K++++    E    P   P+      P+P GP
Sbjct: 345 NYNNYKKLYYNIINIEQIPVPVPVPIYCGNFPPRPMGP 382


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = +2

Query: 395 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEXSPQPQGP 508
           N ++ +K++++  Y E    P   P+      P+P GP
Sbjct: 319 NNNNYKKLYYNINYIEQIPIPVPVPIYCGNFPPRPMGP 356


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +2

Query: 410 EKIWHHTFYNELRVAPEEHPVLLTEXSPQPQGP 508
           +K++++  Y E    P   PV      P+P GP
Sbjct: 106 KKLYYNINYIEQIPVPVPVPVYCGNFPPRPMGP 138


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 12/34 (35%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
 Frame = +3

Query: 675 TP-PRHPASGLSRSRPHRLPHEDPHRARLLVHYH 773
           TP P H   G   S  H  PH     A    H H
Sbjct: 411 TPGPHHHTMGHGHSHIHATPHHHHSHAATPHHQH 444


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = +3

Query: 588 AVRVRSYHRYRAGXRRRCLPHRAHLRRIRTPPRHPASGLSRSRP 719
           ++  +++HR        C P   +L +I + P HP +  S S P
Sbjct: 62  SLTAQAHHRLYPAFSSSCDPVPGNLEQIGSRPLHPPAS-STSLP 104


>DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +2

Query: 410 EKIWHHTFYNELRVAPEEHPVLLTEXSPQPQGP 508
           +K++++  Y E    P   P+      P+P GP
Sbjct: 104 KKLYYNINYIEQIPVPVPVPIYCGNFPPRPMGP 136


>DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +2

Query: 410 EKIWHHTFYNELRVAPEEHPVLLTEXSPQPQGP 508
           +K++++  Y E    P   P+      P+P GP
Sbjct: 104 KKLYYNINYIEQIPVPVPVPIYCGNFPPRPMGP 136


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +2

Query: 410 EKIWHHTFYNELRVAPEEHPVLLTEXSPQPQGP 508
           +K++++  Y E    P   P+      P+P GP
Sbjct: 324 KKLYYNINYIEQIPVPVPVPIYYGNFPPRPMGP 356


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +2

Query: 410 EKIWHHTFYNELRVAPEEHPVLLTEXSPQPQGP 508
           +K++++  Y E    P   P+      P+P GP
Sbjct: 342 KKLYYNINYIEQIPVPVPVPIYCGNFPPRPMGP 374


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 247,545
Number of Sequences: 438
Number of extensions: 5791
Number of successful extensions: 31
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -