Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_G01
         (1280 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1174 - 26696869-26698191                                         31   2.0  
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350...    30   3.4  
04_04_1125 + 31085106-31085714                                         30   4.5  

>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 12/35 (34%), Positives = 13/35 (37%)
 Frame = +1

Query: 154 PTXPXXGKPXPPXXXPQKPPXSNPTXXXPXXNPXP 258
           PT P    P PP   P + P   P    P   P P
Sbjct: 214 PTLPPPSPPPPPPTVPPRTPGDTPAVVEPKPQPPP 248


>01_07_0021 -
           40533864-40534583,40534779-40534814,40534909-40535048,
           40535837-40535922,40536430-40536653,40536770-40536865,
           40538766-40538833,40539945-40540055,40540799-40540955
          Length = 545

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
 Frame = +3

Query: 120 PSXXXXQXPAXP-NXPPXXQTXPPXXPTTKTPXLXPHXXT 236
           PS    Q P  P + PP   T PP  PT+  P + P   T
Sbjct: 423 PSDAFEQPPPPPEHPPPPESTSPPPPPTSDPPPVPPPPPT 462


>04_04_1125 + 31085106-31085714
          Length = 202

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = +3

Query: 144 PAXPNXPPXXQTXPPXXPTTKTP 212
           PA P  PP   T PP  PT  TP
Sbjct: 53  PATPTTPPTPWTPPPATPTPPTP 75


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,257,986
Number of Sequences: 37544
Number of extensions: 107356
Number of successful extensions: 770
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3980760984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)