Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_F24
         (909 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81038-12|CAB02758.2|  380|Caenorhabditis elegans Hypothetical p...    38   0.013
U40419-1|AAA81422.1|  283|Caenorhabditis elegans Hypothetical pr...    33   0.28 
AF067607-8|AAF98614.1|  144|Caenorhabditis elegans Hypothetical ...    30   2.0  
U42439-9|AAM98033.1|  294|Caenorhabditis elegans Hypothetical pr...    29   3.5  
U42439-8|AAM98032.1|  431|Caenorhabditis elegans Hypothetical pr...    29   3.5  
AF003385-6|AAB54246.1|  354|Caenorhabditis elegans Hypothetical ...    29   3.5  
U97004-3|AAB52277.1|  365|Caenorhabditis elegans Hypothetical pr...    29   4.6  
U00044-7|AAA50675.1|  990|Caenorhabditis elegans Hypothetical pr...    29   6.1  
Z68134-4|CAA92224.1|  567|Caenorhabditis elegans Hypothetical pr...    28   8.0  
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p...    28   8.0  
AF025471-10|AAB71059.1|  326|Caenorhabditis elegans Hypothetical...    28   8.0  

>Z81038-12|CAB02758.2|  380|Caenorhabditis elegans Hypothetical
           protein C25A1.3 protein.
          Length = 380

 Score = 37.5 bits (83), Expect = 0.013
 Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
 Frame = +1

Query: 283 VLDAACGTGIDSMMLVNEGFK-VVSVDASDKMLKHA---LKARWDXRKNPKYD-DWVIEE 447
           VLD ACG G D       G K VV  D +D  ++ A    K  +  +KN  +   +++ +
Sbjct: 58  VLDLACGKGGDLKKWDIAGAKDVVMADVADVSIQQAEERYKQMFGYKKNNIFTVQFIVAD 117

Query: 448 ANWETLPQDIETFLPDTQFDAVICLGNSFAHLLDEYGDQRMQKLCLSNFAKCLKPGGL 621
              E L   IE   P   FD V C    FA L   + D+   ++ L N    LKPGG+
Sbjct: 118 CTKENLEDRIENKDP---FDLVSC---QFA-LHYSFVDEASARIFLKNAVGMLKPGGV 168


>U40419-1|AAA81422.1|  283|Caenorhabditis elegans Hypothetical
           protein C27F2.4 protein.
          Length = 283

 Score = 33.1 bits (72), Expect = 0.28
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +1

Query: 283 VLDAACGTGIDSMMLVNEGFKVVSVDASDKMLKHA 387
           +LD  CGTG+ S ++++ G   V VD S  ML+ A
Sbjct: 57  LLDIGCGTGMSSEVILDAGHMFVGVDVSRPMLEIA 91


>AF067607-8|AAF98614.1|  144|Caenorhabditis elegans Hypothetical
           protein C18H7.9 protein.
          Length = 144

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = +1

Query: 256 LLKNN-GCKTVLDAACGTGIDSMMLVNEGF-KVVSVDASDKMLKH 384
           LLK N   K VLD  CG G++S   +  G  KVV  D S +M+++
Sbjct: 31  LLKYNLKDKKVLDIGCGNGLNSTTFLQWGARKVVGFDNSQEMIEN 75


>U42439-9|AAM98033.1|  294|Caenorhabditis elegans Hypothetical
           protein F19C7.8b protein.
          Length = 294

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = -1

Query: 705 GIAIIIN*MPRSGSSVDHRIIVPVVDKQEPAWLQAFREVAQTQLLHPLVSVLIQQM 538
           G  +I    P +GSS+     V VVD  +P WL  FR   +T+ +    +  + QM
Sbjct: 179 GYIVIHEYSPSNGSSLVLGEKVRVVDNGDPDWLHGFRLNDRTEHMISFPATCVAQM 234


>U42439-8|AAM98032.1|  431|Caenorhabditis elegans Hypothetical
           protein F19C7.8a protein.
          Length = 431

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = -1

Query: 705 GIAIIIN*MPRSGSSVDHRIIVPVVDKQEPAWLQAFREVAQTQLLHPLVSVLIQQM 538
           G  +I    P +GSS+     V VVD  +P WL  FR   +T+ +    +  + QM
Sbjct: 316 GYIVIHEYSPSNGSSLVLGEKVRVVDNGDPDWLHGFRLNDRTEHMISFPATCVAQM 371


>AF003385-6|AAB54246.1|  354|Caenorhabditis elegans Hypothetical
           protein R08F11.4 protein.
          Length = 354

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 34/118 (28%), Positives = 45/118 (38%), Gaps = 2/118 (1%)
 Frame = +1

Query: 283 VLDAACGTGIDSMMLVNEGFK--VVSVDASDKMLKHALKARWDXRKNPKYDDWVIEEANW 456
           VLD  CG G  S +L     K   V +D ++K +K A       R   K D    E   +
Sbjct: 169 VLDVGCGGGFHSGLLAEHYPKSQFVGLDITEKAIKAA-------RLKKKSDGTDFENLEF 221

Query: 457 ETLPQDIETFLPDTQFDAVICLGNSFAHLLDEYGDQRMQKLCLSNFAKCLKPGGLLFI 630
                 I        FD VI  G+   H      DQ    LCL    + +KP GL+ +
Sbjct: 222 VVADAAIMPSSWTDSFDLVILFGS--CH------DQMRPDLCLLEVHRVVKPDGLVAV 271


>U97004-3|AAB52277.1|  365|Caenorhabditis elegans Hypothetical
           protein R08E5.3 protein.
          Length = 365

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 2/115 (1%)
 Frame = +1

Query: 283 VLDAACGTGIDSMMLVNEGFK--VVSVDASDKMLKHALKARWDXRKNPKYDDWVIEEANW 456
           VLD  CG G  S +L  +  K   V +D  +  ++ A + +   +    +++    E + 
Sbjct: 179 VLDVGCGGGFHSSLLAEQYPKSHFVGLDIGEDAIRQAKQRK--TKSGAAFNNLEFIECDA 236

Query: 457 ETLPQDIETFLPDTQFDAVICLGNSFAHLLDEYGDQRMQKLCLSNFAKCLKPGGL 621
             +P+     +    FD V+        + D   DQR   LC+    + LKP G+
Sbjct: 237 GKMPE-----IWTDSFDLVL--------IFDACHDQRRPDLCVQEIHRVLKPSGM 278


>U00044-7|AAA50675.1|  990|Caenorhabditis elegans Hypothetical
           protein K04C2.2 protein.
          Length = 990

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +1

Query: 286 LDAACGTGIDSMMLVNEGFKVVSV 357
           +D ACGTG+ + +L N G K +SV
Sbjct: 355 VDKACGTGLTTALLSNLGKKQISV 378


>Z68134-4|CAA92224.1|  567|Caenorhabditis elegans Hypothetical
           protein T27A8.5 protein.
          Length = 567

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = -2

Query: 611 GFRHFAKLLRHSFCILWSPYSSNKWAN---EFPRHMTASN*VSGRN 483
           GFRH +  L   FC+    Y  ++  N     P H+T  + ++GRN
Sbjct: 200 GFRHHSAKLSCFFCLAPETYYKHEGPNRKLSRPGHLTIQDSINGRN 245


>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
            protein C34D4.14 protein.
          Length = 2761

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
 Frame = +1

Query: 112  QVFHSRSLGIPSEGVKDQYADGKAAKTWNKFIGDSNQRTQNYKDFLIGLLKNNGCKTVLD 291
            +V    SL   S   KD   + +A K   K      ++  +Y D L GL++N     +LD
Sbjct: 1919 EVITGESLSDASSSAKDATTN-EAQKKGGKKPKKWFKKMSSYTDVLKGLMQNRYPVALLD 1977

Query: 292  -AACGTGIDSMM 324
             AA G  +D MM
Sbjct: 1978 PAAAGIEMDEMM 1989


>AF025471-10|AAB71059.1|  326|Caenorhabditis elegans Hypothetical
           protein R52.1 protein.
          Length = 326

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = -1

Query: 306 STTSGVQNSLAAVVLQETDQEVFVVLRSLITISDEL-VPCFCRFAVSVLIFYTLG 145
           +T  G+ N+L      + D EV + L      +DE  + C  RF V  LIF T+G
Sbjct: 270 NTPYGI-NALMPFDHNDMDPEVVMALLKKSLATDEFYLDCIMRFTVICLIFITVG 323


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,123,204
Number of Sequences: 27780
Number of extensions: 427536
Number of successful extensions: 1368
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1367
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)