Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_F16
(900 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1008 - 7987936-7988628,7988923-7989102 36 0.058
08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165 31 0.94
07_01_1201 - 11419851-11419913,11420090-11420311 30 2.2
01_06_1368 - 36715630-36715698,36715835-36716284 30 2.2
03_05_0924 + 28861561-28861692,28861970-28862262,28862841-28863657 30 2.9
12_02_0692 - 22197582-22198214,22198761-22198935,22199089-221991... 29 3.8
12_02_1188 + 26801833-26802225 29 5.0
06_01_0813 + 6157734-6157939,6158421-6158488,6158922-6158986,615... 29 5.0
05_04_0142 - 18372751-18373338 29 5.0
05_03_0682 - 16916437-16916686,16916761-16916822,16917082-169171... 29 5.0
03_06_0149 - 31987183-31987630,31987813-31987874 29 5.0
12_02_0234 - 16043995-16044894,16050069-16050200,16050278-16050718 28 8.8
11_01_0125 + 1018059-1018403 28 8.8
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095... 28 8.8
09_03_0012 - 11514244-11514797,11515045-11515205,11515943-11516004 28 8.8
09_02_0484 + 9804351-9805203,9806204-9806760,9807243-9807959 28 8.8
>01_01_1008 - 7987936-7988628,7988923-7989102
Length = 290
Score = 35.5 bits (78), Expect = 0.058
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -1
Query: 726 RKRHASRREKGGQVSGKRQGRNRRAHEGACQGETPG 619
R R RR GG+V+G+ R+RR GA +GE G
Sbjct: 239 RVRRRGRRGGGGEVNGEEAARSRRRRRGAWEGEEEG 274
>08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165
Length = 430
Score = 31.5 bits (68), Expect = 0.94
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -2
Query: 647 RELARGKRLVSL*SCRVSPPLT*ASIFVMLVQGGGAYGKTPAT 519
R L+RGK L+S + R PP + + V+ + GGG G P T
Sbjct: 22 RVLSRGKSLLSPSTPRSPPPSYGSIVTVLSIDGGGVRGIIPGT 64
>07_01_1201 - 11419851-11419913,11420090-11420311
Length = 94
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +3
Query: 585 QRWRN--PTGL*RYQAFPPGKLPRALSCSDPAAYRIP 689
Q+WR+ PTG + +FP G LP A PA R P
Sbjct: 27 QQWRSTGPTGKLCFCSFPAGALPPAAGAGQPAPDRQP 63
>01_06_1368 - 36715630-36715698,36715835-36716284
Length = 172
Score = 30.3 bits (65), Expect = 2.2
Identities = 30/89 (33%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Frame = -1
Query: 837 MVPDKGAXVGLNGGFVHTGPAGANDL------HRTEIPTAXAMRKRHASRREKGGQVSGK 676
++P +G G NGG V GP G DL R A R A + + QV
Sbjct: 70 LLPLRGEG-GANGGGVGRGPGGVGDLGELLRWTREVAANPVAARPVPAEVKARKRQVLAL 128
Query: 675 RQGRNRRAHEGACQGETPGIFIV-LSGFA 592
R+ R R + A E P F V LSG A
Sbjct: 129 RRARYLRMEDVANADELPSFFKVWLSGCA 157
>03_05_0924 + 28861561-28861692,28861970-28862262,28862841-28863657
Length = 413
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 743 GISVRCRSFAPAGPVCTNPPFSPTXAPL 826
G+ VR S++P+GP PP S + APL
Sbjct: 57 GVVVRAASWSPSGPESLPPPPSSSIAPL 84
>12_02_0692 -
22197582-22198214,22198761-22198935,22199089-22199185,
22199359-22199473,22199546-22199633,22199972-22200063,
22200138-22200629,22201025-22201048,22201348-22203489
Length = 1285
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +3
Query: 540 GSAPLNEHHKNRRSSQRWRNPTGL*RYQAFPPGKLPRALSCSDPAAYRIPVRLSPFGKR 716
GS N ++ R+S Q+ ++P A P LPRAL+ AA R+P+ P +R
Sbjct: 163 GSGKGNHRNRKRKSHQQRQSP-------AAAPSLLPRALALLADAAGRLPLGEHPDARR 214
>12_02_1188 + 26801833-26802225
Length = 130
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 696 GGQVSGKRQGRNRRAHEGACQGETPGIFIVLSG 598
GG SGKR AHEG +G P +++V G
Sbjct: 33 GGGSSGKRSSSAAAAHEGVPEGHVP-VYVVGEG 64
>06_01_0813 +
6157734-6157939,6158421-6158488,6158922-6158986,
6159517-6159605,6159682-6159862,6159972-6160100,
6160187-6160320,6160424-6160637,6160720-6160904,
6160994-6161089,6161175-6161328
Length = 506
Score = 29.1 bits (62), Expect = 5.0
Identities = 22/74 (29%), Positives = 31/74 (41%)
Frame = -1
Query: 843 KTMVPDKGAXVGLNGGFVHTGPAGANDLHRTEIPTAXAMRKRHASRREKGGQVSGKRQGR 664
KT++PD+ A V L F N+ R RKR S R++ G VSG +
Sbjct: 418 KTIIPDRKALVRL---FDKVDGGLLNEGERLSRRIIDIHRKRQGSPRKRKGPVSGTKGND 474
Query: 663 NRRAHEGACQGETP 622
R+ E + P
Sbjct: 475 RFRSEEAFYENPLP 488
>05_04_0142 - 18372751-18373338
Length = 195
Score = 29.1 bits (62), Expect = 5.0
Identities = 22/82 (26%), Positives = 32/82 (39%)
Frame = -1
Query: 786 TGPAGANDLHRTEIPTAXAMRKRHASRREKGGQVSGKRQGRNRRAHEGACQGETPGIFIV 607
+G A ++ T + R E+GG G++QGR R+A A + P
Sbjct: 37 SGSAASSSYPSTSGSAGSSSSGRRVEEEEQGGGGGGRKQGRRRKAVARAIRERLPAAVAC 96
Query: 606 LSGFATSDLSVDFCDARSGGRS 541
A V+ RSG RS
Sbjct: 97 WGNGAV----VEGIGGRSGRRS 114
>05_03_0682 -
16916437-16916686,16916761-16916822,16917082-16917147,
16917606-16917737,16917925-16918026,16918146-16918343,
16918409-16918555,16918804-16918914,16919661-16920194,
16920269-16920425,16920511-16920660,16920744-16920883,
16921668-16921784,16922759-16922932,16923020-16923187,
16923323-16923464,16923610-16923728,16924997-16925098,
16925618-16925701,16926843-16927142
Length = 1084
Score = 29.1 bits (62), Expect = 5.0
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +2
Query: 533 FHRLRPPERASQKSTLKSEVAKPDRTIKIPGVSPWQAPSCALLFRPCR 676
++ R E S + T+K E+ DRT K P + PW CAL PCR
Sbjct: 495 YYNPRESEPNSWEDTMKDEL---DRT-KYPRM-PWHDVQCALYGPPCR 537
>03_06_0149 - 31987183-31987630,31987813-31987874
Length = 169
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -1
Query: 732 AMRKRHASRREKGGQVSGKRQGRNRRAHEGACQGETP 622
A+ + H R + + +R+GR R AHEG G P
Sbjct: 76 AVARGHGLERLQEAGIEAERRGRRRNAHEGIKIGAEP 112
>12_02_0234 - 16043995-16044894,16050069-16050200,16050278-16050718
Length = 490
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +2
Query: 635 WQAPSCALLFRPCRLPDTCPPFSLREAWRFLIAXAVGISVRCRSF-APAGPVCTNP 799
W++ + AL +RPC + + R W+ L G + C +CTNP
Sbjct: 319 WRSRTIALGYRPCHIVRLMIVVNARGRWKKLPLGYYGNGLLCSVIETTVNDLCTNP 374
>11_01_0125 + 1018059-1018403
Length = 114
Score = 28.3 bits (60), Expect = 8.8
Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 8/73 (10%)
Frame = -1
Query: 825 KGAXVGLNGGFVHTGPAGANDLHRTEIPTAXAMRKRHASRREK------GGQVSGKRQGR 664
K + G++GG G G R A R+R R EK GG GK GR
Sbjct: 42 KVSAAGIDGGEEQLGVEGVGGRDRWRRGAARRGRRRQRPRDEKASGGRGGGADLGKDSGR 101
Query: 663 NRRAHEG--ACQG 631
R +E C+G
Sbjct: 102 GRTKNEALRGCEG 114
>10_08_0940 -
21708557-21708733,21709058-21709142,21709330-21709551,
21710640-21710815,21711883-21711946,21712433-21712507,
21715114-21715199,21715297-21716715
Length = 767
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Frame = +2
Query: 302 NESAN---ARGEAVCVLGALPLPRSLTRCAR 385
+ESAN AR EAV +G +P+ L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464
>09_03_0012 - 11514244-11514797,11515045-11515205,11515943-11516004
Length = 258
Score = 28.3 bits (60), Expect = 8.8
Identities = 25/81 (30%), Positives = 34/81 (41%)
Frame = -1
Query: 810 GLNGGFVHTGPAGANDLHRTEIPTAXAMRKRHASRREKGGQVSGKRQGRNRRAHEGACQG 631
G GG+ H G AG HR A +R+R R + + G+ N A G
Sbjct: 125 GAGGGWRHAG-AGGRRRHRRARRGAVRLRRRRQQWRRRRTRSCGRTGWHN--ATVATVIG 181
Query: 630 ETPGIFIVLSGFATSDLSVDF 568
+ G +LSG + DL V F
Sbjct: 182 D--GRIALLSGISAQDLFVWF 200
>09_02_0484 + 9804351-9805203,9806204-9806760,9807243-9807959
Length = 708
Score = 28.3 bits (60), Expect = 8.8
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = -1
Query: 771 ANDLHRTEIPTAXAMRKRHASRR---EKGGQVSGKRQGRNRRAHEGACQGETPGIFIVLS 601
A L +P A R SRR + ++ R+G +R AC G+ G+ +LS
Sbjct: 9 AASLRAPAVPMAVVAGDRGQSRRFREDAAVEIPVVRRGMHRLLLAAACSGDCEGLSFLLS 68
Query: 600 GFATS 586
G S
Sbjct: 69 GDGNS 73
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,585,870
Number of Sequences: 37544
Number of extensions: 514961
Number of successful extensions: 1568
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1567
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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