Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_F14
         (907 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       31   0.014
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    24   1.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              24   1.7  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    24   2.2  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   8.8  
AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          22   8.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   8.8  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 31.1 bits (67), Expect = 0.014
 Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 4/41 (9%)
 Frame = +2

Query: 788 PXXXAPGP--GPXXTPPXPPRXXHPXP--XPPPRGXXXPPP 898
           P   APGP   P  +P  P R   P P   PPP G    PP
Sbjct: 16  PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56



 Score = 24.6 bits (51), Expect = 1.3
 Identities = 14/38 (36%), Positives = 15/38 (39%), Gaps = 3/38 (7%)
 Frame = +2

Query: 728 GXP-PXXXPXXNP--PPXXXPPPPXXXAPGPGPXXTPP 832
           G P P   P  +P  P    PP P    P  GP   PP
Sbjct: 19  GAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56



 Score = 23.8 bits (49), Expect = 2.2
 Identities = 13/41 (31%), Positives = 14/41 (34%), Gaps = 5/41 (12%)
 Frame = +2

Query: 734 PPXXXPXXNPPPXXXPPPPXXXAP-----GPGPXXTPPXPP 841
           P    P   P P   P  P   +P     GP P   P  PP
Sbjct: 16  PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56



 Score = 22.6 bits (46), Expect = 5.1
 Identities = 13/46 (28%), Positives = 14/46 (30%)
 Frame = +2

Query: 692 PXGGXXXPPXXXGXPPXXXPXXNPPPXXXPPPPXXXAPGPGPXXTP 829
           P  G   P       P      +PP     PPP    PG  P   P
Sbjct: 16  PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGP-PGAPPSQNP 60



 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = +1

Query: 712 PPXTXGXPPPXXPXXQPP 765
           PP     PPP  P   PP
Sbjct: 39  PPNPSQGPPPGGPPGAPP 56


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 619  PPPPPPPKNXXXA 657
            PPPPPPP +   A
Sbjct: 1355 PPPPPPPPSSGQA 1367



 Score = 23.8 bits (49), Expect = 2.2
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 618  PPPPPPP 638
            PPPPPPP
Sbjct: 1355 PPPPPPP 1361



 Score = 23.8 bits (49), Expect = 2.2
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 618  PPPPPPP 638
            PPPPPPP
Sbjct: 1356 PPPPPPP 1362


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = +1

Query: 622  PPPPPPKN 645
            PPPPPP+N
Sbjct: 1859 PPPPPPRN 1866


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 764 PPXXXPPPPXXXAPGP 811
           PP   PPPP   + GP
Sbjct: 338 PPKPAPPPPPPSSSGP 353


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = -2

Query: 831 GGVXXGPGPGAXXXGGGGXFXGGGL 757
           GGV  G   G+   G      GGGL
Sbjct: 28  GGVVTGASGGSIVVGANNGGGGGGL 52


>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -2

Query: 702 PPXGGWGXXGP 670
           PP  GWG  GP
Sbjct: 32  PPLFGWGSYGP 42


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 482  FXSPPPXXPPPF 447
            F +PPP  P PF
Sbjct: 1163 FWNPPPFMPSPF 1174


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.308    0.145    0.490 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,273
Number of Sequences: 438
Number of extensions: 9589
Number of successful extensions: 26
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)