Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_F13
         (865 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0610 - 25449085-25453284                                         31   1.2  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.3  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.4  

>11_06_0610 - 25449085-25453284
          Length = 1399

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 22/74 (29%), Positives = 30/74 (40%)
 Frame = +1

Query: 628  PLEAPSCALPVXDPXRLPDTCPXFLPSGSVALSHXSXCXYLXPVYVVXPXPXLCAEPPXX 807
            P+++P    PV  P   P+  P   P+  V LS  +      P  V  P P + + PP  
Sbjct: 1228 PVKSPPPPAPVISPPP-PEKSPP--PAAPVILSPPAVKSLPPPAPVSLPPPPVKSLPPPA 1284

Query: 808  PDXCPXPXTXXLSP 849
            P   P P    L P
Sbjct: 1285 PVSLPPPVVKSLPP 1298



 Score = 28.3 bits (60), Expect = 8.4
 Identities = 22/79 (27%), Positives = 29/79 (36%)
 Frame = +1

Query: 628  PLEAPSCALPVXDPXRLPDTCPXFLPSGSVALSHXSXCXYLXPVYVVXPXPXLCAEPPXX 807
            P+++P    PV  P     + P   P   V L          P  V+ P P + + PP  
Sbjct: 1164 PIKSPPPPAPVISPPPPVKSPP---PPAPVILPPPPVKSPPPPAPVISPPPPVKSPPPPA 1220

Query: 808  PDXCPXPXTXXLSPXPXTP 864
            P   P P     SP P  P
Sbjct: 1221 PVILPPPPVK--SPPPPAP 1237


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +3

Query: 351 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 506
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 300 NESAN---ARGEAVCVLGALPLPRSLTRCAR 383
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,159,575
Number of Sequences: 37544
Number of extensions: 428517
Number of successful extensions: 1175
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1155
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)