Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_F13
         (865 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC150265-1|AAI50266.1| 1481|Homo sapiens CRKRS protein protein.        31   7.2  
BC117331-1|AAI17332.1|  346|Homo sapiens selenoprotein V protein.      31   7.2  
AY324825-1|AAP85542.1|  346|Homo sapiens selenoprotein V protein.      31   7.2  
AF227198-1|AAF36401.1| 1490|Homo sapiens CrkRS protein.                31   7.2  
AB020711-1|BAA74927.2| 1535|Homo sapiens KIAA0904 protein protein.     31   7.2  

>BC150265-1|AAI50266.1| 1481|Homo sapiens CRKRS protein protein.
          Length = 1481

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +1

Query: 772 PXPXLCAEPPXXPDXCPXPXTXXLSPXPXTP 864
           P P + + PP  P   P P T  L P P  P
Sbjct: 528 PLPTIASPPPPLPTTTPPPQTPPLPPLPPIP 558


>BC117331-1|AAI17332.1|  346|Homo sapiens selenoprotein V protein.
          Length = 346

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 20/69 (28%), Positives = 28/69 (40%)
 Frame = +1

Query: 622 RFPLEAPSCALPVXDPXRLPDTCPXFLPSGSVALSHXSXCXYLXPVYVVXPXPXLCAEPP 801
           R P   P+ A  +  P R+P   P  L +G +  +      YL P   + P P    E P
Sbjct: 104 RNPTPVPTPARTLTPPVRVPAPAPAQLLAG-IRAALPVLDSYLAPALPLDPPPEPAPELP 162

Query: 802 XXPDXCPXP 828
             P+  P P
Sbjct: 163 LLPEEDPEP 171


>AY324825-1|AAP85542.1|  346|Homo sapiens selenoprotein V protein.
          Length = 346

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 20/69 (28%), Positives = 28/69 (40%)
 Frame = +1

Query: 622 RFPLEAPSCALPVXDPXRLPDTCPXFLPSGSVALSHXSXCXYLXPVYVVXPXPXLCAEPP 801
           R P   P+ A  +  P R+P   P  L +G +  +      YL P   + P P    E P
Sbjct: 104 RNPTPVPTPARTLTPPVRVPAPAPAQLLAG-IRAALPVLDSYLAPALPLDPPPEPAPELP 162

Query: 802 XXPDXCPXP 828
             P+  P P
Sbjct: 163 LLPEEDPEP 171


>AF227198-1|AAF36401.1| 1490|Homo sapiens CrkRS protein.
          Length = 1490

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +1

Query: 772 PXPXLCAEPPXXPDXCPXPXTXXLSPXPXTP 864
           P P + + PP  P   P P T  L P P  P
Sbjct: 528 PLPTIASPPPPLPTTTPPPQTPPLPPLPPIP 558


>AB020711-1|BAA74927.2| 1535|Homo sapiens KIAA0904 protein protein.
          Length = 1535

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +1

Query: 772 PXPXLCAEPPXXPDXCPXPXTXXLSPXPXTP 864
           P P + + PP  P   P P T  L P P  P
Sbjct: 582 PLPTIASPPPPLPTTTPPPQTPPLPPLPPIP 612


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,496,444
Number of Sequences: 237096
Number of extensions: 2256116
Number of successful extensions: 6481
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6411
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11039988564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)