Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_F05
(889 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63; Eukary... 188 2e-46
UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105; Eukar... 165 1e-39
UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S riboso... 141 2e-32
UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365... 134 3e-30
UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S riboso... 126 1e-27
UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative, ... 122 9e-27
UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal ... 122 2e-26
UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S riboso... 107 3e-22
UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, who... 102 1e-20
UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=... 87 6e-16
UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein sim... 76 1e-12
UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1; Encepha... 73 7e-12
UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=... 65 2e-09
UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Re... 60 6e-08
UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellu... 56 2e-06
UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome sh... 53 1e-05
UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6; Archae... 51 5e-05
UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilu... 48 4e-04
UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2; Methan... 46 0.001
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2; Desulf... 44 0.007
UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S riboso... 42 0.021
UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2; Thermo... 41 0.048
UniRef50_UPI00015531AB Cluster: PREDICTED: similar to OTTHUMP000... 39 0.15
UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5; Archae... 38 0.26
UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus... 38 0.34
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 38 0.45
UniRef50_Q64D47 Cluster: Putative uncharacterized protein; n=3; ... 38 0.45
UniRef50_Q8PXL8 Cluster: 30S ribosomal protein S17e; n=8; Euryar... 38 0.45
UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2; Archae... 38 0.45
UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2; Archae... 36 1.4
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 36 1.8
UniRef50_Q64BW7 Cluster: Ribosomal protein S17E; n=1; uncultured... 35 3.2
UniRef50_A5DJQ3 Cluster: Putative uncharacterized protein; n=1; ... 34 4.2
UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=... 34 4.2
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.6
UniRef50_Q14M86 Cluster: Putative uncharacterized protein; n=1; ... 33 9.7
>UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63;
Eukaryota|Rep: 40S ribosomal protein S17 - Drosophila
melanogaster (Fruit fly)
Length = 131
Score = 188 bits (457), Expect = 2e-46
Identities = 89/108 (82%), Positives = 94/108 (87%)
Frame = -1
Query: 475 IEKYYTRLTLDFDTNKRICEEIAIIPTKPXRNKIAGFATHLMRRXRHSQVRGXXIKLQEE 296
IEKYYTRLTLDF TNKRICEE+AIIPTKP RNKIAG+ THLM R RHSQVRG IKLQEE
Sbjct: 17 IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEE 76
Query: 295 ERERRDNYVPEVXAXEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPAT 152
ERERRDNYVP V A E DIIEVD DTK+MLK+LDF+NI GLQLTQP T
Sbjct: 77 ERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNT 124
>UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105;
Eukaryota|Rep: 40S ribosomal protein S17 - Homo sapiens
(Human)
Length = 135
Score = 165 bits (401), Expect = 1e-39
Identities = 76/106 (71%), Positives = 89/106 (83%)
Frame = -1
Query: 475 IEKYYTRLTLDFDTNKRICEEIAIIPTKPXRNKIAGFATHLMRRXRHSQVRGXXIKLQEE 296
IEKYYTRL DF TNKR+CEEIAIIP+K RNKIAG+ THLM+R + VRG IKLQEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76
Query: 295 ERERRDNYVPEVXAXEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 158
ERERRDNYVPEV A + +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 77 ERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Rattus norvegicus
Length = 190
Score = 141 bits (342), Expect = 2e-32
Identities = 67/106 (63%), Positives = 78/106 (73%)
Frame = -1
Query: 475 IEKYYTRLTLDFDTNKRICEEIAIIPTKPXRNKIAGFATHLMRRXRHSQVRGXXIKLQEE 296
IEKYYTRL DF TNK +CEEIAIIP++ RNKI + THLM+R + VRG IKLQEE
Sbjct: 72 IEKYYTRLGNDFHTNKHVCEEIAIIPSENLRNKITSYVTHLMKRIQRGPVRGISIKLQEE 131
Query: 295 ERERRDNYVPEVXAXEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 158
ERERRDNYVPE A + +IIEVDPDTK ML + F ++ Q TQP
Sbjct: 132 ERERRDNYVPEGSALDQEIIEVDPDTKKMLNLPGFGRLSNFQDTQP 177
>UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365;
n=3; Homo/Pan/Gorilla group|Rep: Uncharacterized protein
ENSP00000351365 - Homo sapiens (Human)
Length = 135
Score = 134 bits (324), Expect = 3e-30
Identities = 64/109 (58%), Positives = 81/109 (74%)
Frame = -1
Query: 475 IEKYYTRLTLDFDTNKRICEEIAIIPTKPXRNKIAGFATHLMRRXRHSQVRGXXIKLQEE 296
IEKY TRL DF TNK +CE IAII +K RNKI G+ HLM+R R VRG IKLQEE
Sbjct: 18 IEKYCTRLGNDFYTNKCVCE-IAIILSKKLRNKIVGYVKHLMKRIRKGPVRGISIKLQEE 76
Query: 295 ERERRDNYVPEVXAXEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQ 149
ERE RDNYVPE+ + + +EVDPDTK+ML++LDF +++ LQ+T+P +
Sbjct: 77 ERENRDNYVPEISVLDQETVEVDPDTKEMLELLDFVSLSNLQVTRPTVE 125
>UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Macaca mulatta
Length = 189
Score = 126 bits (303), Expect = 1e-27
Identities = 58/105 (55%), Positives = 78/105 (74%)
Frame = -1
Query: 472 EKYYTRLTLDFDTNKRICEEIAIIPTKPXRNKIAGFATHLMRRXRHSQVRGXXIKLQEEE 293
++YYT L +F +NKR CEE II +K NKI G+ HLM+R + VRG IKLQE+E
Sbjct: 72 DQYYTPLGKNFCSNKRACEETTIILSKKLCNKIVGYVMHLMKRIQKDPVRGISIKLQEKE 131
Query: 292 RERRDNYVPEVXAXEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 158
RER+DNYVPE+ A + + IEVDPDTK+M K+L+F +++ LQ+TQP
Sbjct: 132 RERKDNYVPEISATDQETIEVDPDTKEMRKVLNFVSLSNLQVTQP 176
>UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative,
expressed; n=7; Eukaryota|Rep: 40S ribosomal protein
S17-4, putative, expressed - Oryza sativa subsp.
japonica (Rice)
Length = 141
Score = 122 bits (295), Expect = 9e-27
Identities = 57/105 (54%), Positives = 77/105 (73%)
Frame = -1
Query: 475 IEKYYTRLTLDFDTNKRICEEIAIIPTKPXRNKIAGFATHLMRRXRHSQVRGXXIKLQEE 296
IEKYY+R+TLDF TNK++ EE++I+P+K RNK+AGF THLMRR + VRG +KLQEE
Sbjct: 17 IEKYYSRMTLDFHTNKKVLEEVSILPSKRLRNKVAGFTTHLMRRIQRGPVRGISLKLQEE 76
Query: 295 ERERRDNYVPEVXAXEHDIIEVDPDTKDMLKMLDFNNINGLQLTQ 161
ERERR ++VPE A E + I VD +T +ML L ++ G++ Q
Sbjct: 77 ERERRMDFVPEKSALEVEEIRVDKETMEMLAALGMADLPGVERQQ 121
>UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal
protein S17; n=8; Eutheria|Rep: PREDICTED: similar to
ribosomal protein S17 - Mus musculus
Length = 228
Score = 122 bits (293), Expect = 2e-26
Identities = 56/106 (52%), Positives = 79/106 (74%)
Frame = -1
Query: 475 IEKYYTRLTLDFDTNKRICEEIAIIPTKPXRNKIAGFATHLMRRXRHSQVRGXXIKLQEE 296
+ +Y+TRL DF T+K +CEEI I+P+K ++KIAG+ THL ++ + VRG IKLQEE
Sbjct: 54 VPEYHTRLGNDFYTDKHVCEEITIVPSKKLQSKIAGYVTHLTKQIQRGPVRGISIKLQEE 113
Query: 295 ERERRDNYVPEVXAXEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 158
ERR +Y+PEV A + +I EVDP TK+MLK+LD +++ LQ+TQP
Sbjct: 114 --ERRADYIPEVSALDQEITEVDPATKEMLKLLDLGSLSNLQVTQP 157
>UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Canis familiaris
Length = 177
Score = 107 bits (258), Expect = 3e-22
Identities = 55/107 (51%), Positives = 75/107 (70%), Gaps = 1/107 (0%)
Frame = -1
Query: 475 IEKYYTRLTLDFDTNKRICEEIAIIPTKPXRNKIAGFATHLMRRXRHSQV-RGXXIKLQE 299
+EK+Y RL F TNKR+CE+IAI P+K RN IAG+ HL +R + V RG
Sbjct: 66 LEKHYPRLGSHFHTNKRVCEDIAISPSKKLRNGIAGYVAHLTKRIQQGPVARGG------ 119
Query: 298 EERERRDNYVPEVXAXEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 158
ER +++ YVPEV A + +IIEVDPDT++MLK+LDF +++ LQ+TQP
Sbjct: 120 -ER-KKETYVPEVSALDQEIIEVDPDTQEMLKLLDFGSLSNLQVTQP 164
>UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_9,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 178
Score = 102 bits (245), Expect = 1e-20
Identities = 48/91 (52%), Positives = 64/91 (70%)
Frame = -1
Query: 475 IEKYYTRLTLDFDTNKRICEEIAIIPTKPXRNKIAGFATHLMRRXRHSQVRGXXIKLQEE 296
IEKYY +LT DF NK+I E+ +P+K RNKIAGFATHL++R + V+G +K+QEE
Sbjct: 57 IEKYYMKLTSDFHFNKKILSEVGQVPSKKLRNKIAGFATHLLKRIQTGSVKGISLKIQEE 116
Query: 295 ERERRDNYVPEVXAXEHDIIEVDPDTKDMLK 203
ERERR +YVPE + + D + D D K ML+
Sbjct: 117 ERERRLDYVPEKSSVDIDNLRGDQDVKRMLE 147
>UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=6;
Trypanosomatidae|Rep: 40S ribosomal protein S17,
putative - Leishmania major
Length = 143
Score = 87.0 bits (206), Expect = 6e-16
Identities = 42/97 (43%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Frame = -1
Query: 475 IEKYYTRLTLDFDTNKRICEEIAIIPTKPXRNKIAGFATHLMRRXRHSQVRGXXIKLQEE 296
+EKYY++L DF NKR+ ++ I +K +NKIAG+ TH+M+R VRG +KLQEE
Sbjct: 17 VEKYYSKLNFDFYQNKRVIMDVTIAESKKLKNKIAGYTTHIMKRLARGPVRGISLKLQEE 76
Query: 295 ERERRDNYVPEVXAXEHDI---IEVDPDTKDMLKMLD 194
ERERR ++ P + I + VD T ML+ L+
Sbjct: 77 ERERRMDHAPATSDVDKVIQSGVSVDKKTMQMLQRLE 113
>UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)); n=2;
Eutheria|Rep: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)) - Homo
sapiens (Human)
Length = 121
Score = 76.2 bits (179), Expect = 1e-12
Identities = 39/98 (39%), Positives = 57/98 (58%)
Frame = -1
Query: 472 EKYYTRLTLDFDTNKRICEEIAIIPTKPXRNKIAGFATHLMRRXRHSQVRGXXIKLQEEE 293
EKYY L DF +K +C+EI I ++ +KIAG+ THLM+ R S + +
Sbjct: 18 EKYYIYLGNDFYMSKYVCKEITITSSRELCSKIAGYVTHLMKEIRGSDSQVSPSSCRRRR 77
Query: 292 RERRDNYVPEVXAXEHDIIEVDPDTKDMLKMLDFNNIN 179
R+ R NYVPE + +I EVD TK+MLK+ F +++
Sbjct: 78 RD-RSNYVPEGSVLDQEITEVDAGTKEMLKLPGFGSVS 114
>UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S17
- Encephalitozoon cuniculi
Length = 120
Score = 73.3 bits (172), Expect = 7e-12
Identities = 33/90 (36%), Positives = 54/90 (60%)
Frame = -1
Query: 472 EKYYTRLTLDFDTNKRICEEIAIIPTKPXRNKIAGFATHLMRRXRHSQVRGXXIKLQEEE 293
EKY+ RL FD N + +++A++ +K +N+IAG+ T L ++ IK EEE
Sbjct: 18 EKYFQRLDSTFDHNLLVVQDVAVVQSKKLKNEIAGYLTSLYKKILKGTYNKVYIKSHEEE 77
Query: 292 RERRDNYVPEVXAXEHDIIEVDPDTKDMLK 203
RER++N +P+ + D +EVD T +M+K
Sbjct: 78 RERKENVIPKESMLDVDCVEVDDVTMEMIK 107
>UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S17, putative -
Babesia bovis
Length = 145
Score = 65.3 bits (152), Expect = 2e-09
Identities = 32/60 (53%), Positives = 39/60 (65%)
Frame = -1
Query: 367 FATHLMRRXRHSQVRGXXIKLQEEERERRDNYVPEVXAXEHDIIEVDPDTKDMLKMLDFN 188
F HLMRR + VRG +KLQEEERERR ++VPE + +I+VD DT DML L N
Sbjct: 66 FIIHLMRRIQKGPVRGISLKLQEEERERRMDFVPERSEVDVPLIQVDQDTADMLTFLKLN 125
>UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Rep:
RpS17 protein - Guillardia theta (Cryptomonas phi)
Length = 118
Score = 60.5 bits (140), Expect = 6e-08
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Frame = -1
Query: 469 KYYTRLTLDFDTNKRICEEIAIIPTKPXRNKIAGFATHLMRRXRHSQVRGXXIKLQ-EEE 293
KY+ LT+DF NK C+EIA+I +K RNKIAG+ THL++ + + ++ +
Sbjct: 19 KYFKHLTIDFQENKFFCDEIALITSKSLRNKIAGYVTHLIKEFFKGKKKKIYTNIKFDIN 78
Query: 292 RERRDNYVPEVXA-XEHDIIEVDPDTKDMLKMLDFNNIN 179
+N EV + E + VD +TK M+K L F N N
Sbjct: 79 NIEINNKESEVFSNTELKLNLVDDETKQMIKKL-FPNKN 116
>UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellular
organisms|Rep: 30S ribosomal protein S17e -
Methanococcus jannaschii
Length = 62
Score = 55.6 bits (128), Expect = 2e-06
Identities = 25/44 (56%), Positives = 32/44 (72%)
Frame = -1
Query: 475 IEKYYTRLTLDFDTNKRICEEIAIIPTKPXRNKIAGFATHLMRR 344
I+KY T DF+TNKR+ EE+A I TK RN+IAG+ TH MR+
Sbjct: 17 IKKYRDLFTTDFETNKRVLEEVAQISTKRLRNRIAGYITHKMRQ 60
>UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 13 SCAF7124, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 372
Score = 52.8 bits (121), Expect = 1e-05
Identities = 21/36 (58%), Positives = 31/36 (86%)
Frame = -1
Query: 265 EVXAXEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 158
+V A + ++IEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 326 QVSALDQELIEVDPDTKEMLKLLDFGSLSNLQVTQP 361
>UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6;
Archaea|Rep: 30S ribosomal protein S17e - Methanopyrus
kandleri
Length = 70
Score = 50.8 bits (116), Expect = 5e-05
Identities = 24/52 (46%), Positives = 31/52 (59%)
Frame = -1
Query: 475 IEKYYTRLTLDFDTNKRICEEIAIIPTKPXRNKIAGFATHLMRRXRHSQVRG 320
+EKY LT DF+ NK++ E +A TK RN IAG+ THLMR + G
Sbjct: 17 VEKYEEYLTTDFEHNKKVVEIVARPKTKKLRNMIAGYVTHLMRLKERQREEG 68
>UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17e - Thermofilum
pendens (strain Hrk 5)
Length = 95
Score = 47.6 bits (108), Expect = 4e-04
Identities = 21/46 (45%), Positives = 32/46 (69%)
Frame = -1
Query: 475 IEKYYTRLTLDFDTNKRICEEIAIIPTKPXRNKIAGFATHLMRRXR 338
+E+Y T+DF+ NK+ EIA IP++ RN+IAG+ T L+RR +
Sbjct: 17 VEQYPDAFTVDFELNKKKLMEIADIPSRQLRNQIAGYITRLVRRKK 62
>UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S17e -
Methanobacterium thermoautotrophicum
Length = 62
Score = 46.4 bits (105), Expect = 0.001
Identities = 20/46 (43%), Positives = 31/46 (67%)
Frame = -1
Query: 475 IEKYYTRLTLDFDTNKRICEEIAIIPTKPXRNKIAGFATHLMRRXR 338
IE + + T DFDTNK++ EE + + TK RNKIAG+ T ++ + +
Sbjct: 17 IETHPGKFTDDFDTNKKLVEEFSTVSTKHLRNKIAGYITRIISQQK 62
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 592 DPDMIRYIDEFGQTTTRMQ 648
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S17e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 103
Score = 43.6 bits (98), Expect = 0.007
Identities = 23/64 (35%), Positives = 34/64 (53%)
Frame = -1
Query: 475 IEKYYTRLTLDFDTNKRICEEIAIIPTKPXRNKIAGFATHLMRRXRHSQVRGXXIKLQEE 296
+E Y T DF+ NKRI ++ P+K RN+IAG+ T L+R + + I+ Q
Sbjct: 17 VEMYPDIFTEDFEHNKRIVSQLIETPSKKLRNQIAGYVTRLIRLYKRTGELQYLIEQQHA 76
Query: 295 ERER 284
E R
Sbjct: 77 EEFR 80
>UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Homo sapiens|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Homo sapiens
Length = 53
Score = 41.9 bits (94), Expect = 0.021
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = -1
Query: 445 DFDTNKRICEEIAIIPTKPXRNKIAGFATH 356
+F NKR+C+EIAIIP+K RNK AG H
Sbjct: 21 NFHRNKRVCKEIAIIPSKKLRNKKAGLLWH 50
>UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2;
Thermoprotei|Rep: 30S ribosomal protein S17e - Aeropyrum
pernix
Length = 74
Score = 40.7 bits (91), Expect = 0.048
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = -1
Query: 475 IEKYYTRLTLDFDTNKRICEEIAIIPTKPXRNKIAGFATHLM 350
+EKY T DF+ NKR+ ++ +K RN+IAG+ THL+
Sbjct: 17 LEKYPDLFTGDFEHNKRVVSQLIEYRSKKLRNQIAGYITHLV 58
>UniRef50_UPI00015531AB Cluster: PREDICTED: similar to
OTTHUMP00000016594; n=1; Mus musculus|Rep: PREDICTED:
similar to OTTHUMP00000016594 - Mus musculus
Length = 128
Score = 39.1 bits (87), Expect = 0.15
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = -1
Query: 472 EKYYTRLTLDFDTNKRICEEIAIIPTKPXRNKIAGFATHLMRRXRHS 332
EK YT L+ D K +C+EI I P+K KIAGF LM++ + +
Sbjct: 35 EKNYTGLSNDLHNKKDLCKEIIIFPSKKL-YKIAGFVMRLMKQIQRN 80
>UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5;
Archaea|Rep: 30S ribosomal protein S17e - Archaeoglobus
fulgidus
Length = 65
Score = 38.3 bits (85), Expect = 0.26
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = -1
Query: 475 IEKYYTRLTLDFDTNKRICEEIAIIPTKPXRNKIAGFATHLMRR 344
++KY T +FD NKR+ E+ I +K RN++AG+ T + R
Sbjct: 17 LKKYPEVFTGNFDENKRLVAELTNIQSKTVRNRVAGYITRRVNR 60
>UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S17e - Candidatus Nitrosopumilus maritimus SCM1
Length = 129
Score = 37.9 bits (84), Expect = 0.34
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Frame = -1
Query: 475 IEKYYTRLTLDFDTNKRICEEIAIIPTKPXRNKIAGFATHL----MRRXRHSQVRGXXIK 308
+E + ++ DF NK+I E++I+ +K +N+IAG+ T+ +R + + + K
Sbjct: 12 LETHKSKFGEDFADNKKILNEVSIVRSKGLKNEIAGYITNYIKKEIREEKAKKAQAEASK 71
Query: 307 LQEEERERRDNYVPEVXAXEHDIIEVDPDTK 215
E+E + V E E P+T+
Sbjct: 72 SLEQEAQVEPEPVEATENTEAPAAEETPETE 102
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 37.5 bits (83), Expect = 0.45
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 788 SALMNRPTRGXXRFAYWA 841
+ALMNRPTRG RFAYWA
Sbjct: 25 AALMNRPTRGERRFAYWA 42
>UniRef50_Q64D47 Cluster: Putative uncharacterized protein; n=3;
environmental samples|Rep: Putative uncharacterized
protein - uncultured archaeon GZfos19A5
Length = 122
Score = 37.5 bits (83), Expect = 0.45
Identities = 25/55 (45%), Positives = 30/55 (54%)
Frame = +3
Query: 357 CVANPAILFLXGLVGMIAISSHILLFVSKSSVNLV*YFSIIIFAAFLTVLVRTRP 521
CV PAILFL L+ SS LF SKSSV+ F+ FA+F T + T P
Sbjct: 18 CVIYPAILFLTPLLSTFVYSSTNFLFSSKSSVHSATSFN-SCFASFFTYVGLTVP 71
>UniRef50_Q8PXL8 Cluster: 30S ribosomal protein S17e; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 64
Score = 37.5 bits (83), Expect = 0.45
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = -1
Query: 475 IEKYYTRLTLDFDTNKRICEEIAIIPTKPXRNKIAGFATHLMRRXR 338
IE Y T DF+TNK + + I +K RN++AG+ T + R +
Sbjct: 17 IENYGEVFTKDFETNKALVTKYTTIESKIIRNRVAGYVTRKVARMK 62
>UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2;
Archaea|Rep: 30S ribosomal protein S17e - Haloarcula
marismortui (Halobacterium marismortui)
Length = 63
Score = 37.5 bits (83), Expect = 0.45
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -1
Query: 475 IEKYYTRLTLDFDTNKRICEEIAIIPTKPXRNKIAGFATHLM 350
+E+Y DF+ NK + EE+ I +K RN+IAG+ T M
Sbjct: 16 MERYPDAFGADFEHNKDVVEELTNIESKGVRNRIAGYVTRKM 57
>UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2;
Archaea|Rep: 30s ribosomal protein S17E - Uncultured
methanogenic archaeon RC-I
Length = 65
Score = 35.9 bits (79), Expect = 1.4
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -1
Query: 475 IEKYYTRLTLDFDTNKRICEEIAIIPTKPXRNKIAGFATHLM 350
+ +Y DF NK E++A + TK RN+IAG+ T M
Sbjct: 17 LRQYPNEFGSDFTANKAKVEQLASVQTKEVRNRIAGYVTRKM 58
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 35.5 bits (78), Expect = 1.8
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -3
Query: 842 APNTQTAXPRXLADSLMQ 789
APNTQTA PR LADSLMQ
Sbjct: 331 APNTQTASPRALADSLMQ 348
>UniRef50_Q64BW7 Cluster: Ribosomal protein S17E; n=1; uncultured
archaeon GZfos26F9|Rep: Ribosomal protein S17E -
uncultured archaeon GZfos26F9
Length = 76
Score = 34.7 bits (76), Expect = 3.2
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -1
Query: 469 KYYTRLTLDFDTNKRICEEIAIIPTKPXRNKIAGFATH 356
K T DF+ NK++ ++ + +K RN+IAG+ TH
Sbjct: 18 KEVAECTDDFELNKKLVDKYTNVESKDVRNRIAGYITH 55
>UniRef50_A5DJQ3 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 606
Score = 34.3 bits (75), Expect = 4.2
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = -1
Query: 325 RGXXIKLQEEERERRDNYVPEVXAXEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQ 149
R I L +ER + + + ++ I++ P T ML FNNI+G QP TQ
Sbjct: 112 RQFQIHLARQERIKESQTLYHINRFDNSIVQKPPRTSYMLSPHTFNNISGNTKHQPPTQ 170
>UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=4;
Methanomicrobiales|Rep: Ribosomal protein S17E-like
protein - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 64
Score = 34.3 bits (75), Expect = 4.2
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = -1
Query: 475 IEKYYTRLTLDFDTNKRICEEIAIIPTKPXRNKIAGFAT 359
+E++ +FD NK++ EI I +K RN++AG+ T
Sbjct: 16 LEQHGKSFNGNFDDNKKVVAEITTIESKMIRNRVAGYVT 54
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.6
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -2
Query: 750 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 586
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_Q14M86 Cluster: Putative uncharacterized protein; n=1;
Spiroplasma citri|Rep: Putative uncharacterized protein
- Spiroplasma citri
Length = 326
Score = 33.1 bits (72), Expect = 9.7
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = -2
Query: 768 PLNLKHKMNAIVVVNLFIAAYNGYK*S-NSITNFTNKAFFSLHSSCGLSKLINVSYHVWI 592
P+NL H + V N+ I Y+GY + SI T +L + +SK N+ Y+ ++
Sbjct: 138 PVNLPHLSDFKVNDNIIIGQYHGYNFNFGSINQATTTVVDNLQPNL-ISKPYNLQYYCYL 196
Query: 591 QLTLT 577
LT+T
Sbjct: 197 FLTIT 201
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 641,755,644
Number of Sequences: 1657284
Number of extensions: 10552380
Number of successful extensions: 21631
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 21090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21625
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79932179145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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