Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_F03
(911 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63; Eukary... 160 5e-38
UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105; Eukar... 144 4e-33
UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S riboso... 133 7e-30
UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative, ... 123 7e-27
UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365... 117 5e-25
UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, who... 111 3e-23
UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S riboso... 108 2e-22
UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal ... 106 9e-22
UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=... 92 2e-17
UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S riboso... 85 3e-15
UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1; Encepha... 76 1e-12
UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein sim... 71 4e-11
UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=... 60 6e-08
UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellu... 60 1e-07
UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Re... 58 2e-07
UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6; Archae... 52 2e-05
UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilu... 50 8e-05
UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2; Methan... 48 3e-04
UniRef50_UPI00015531AB Cluster: PREDICTED: similar to OTTHUMP000... 46 0.001
UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2; Desulf... 45 0.002
UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S riboso... 44 0.005
UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2; Thermo... 43 0.013
UniRef50_Q8PXL8 Cluster: 30S ribosomal protein S17e; n=8; Euryar... 40 0.088
UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5; Archae... 39 0.15
UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus... 39 0.20
UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2; Archae... 38 0.27
UniRef50_Q64D47 Cluster: Putative uncharacterized protein; n=3; ... 38 0.47
UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome sh... 37 0.82
UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2; Archae... 37 0.82
UniRef50_Q64BW7 Cluster: Ribosomal protein S17E; n=1; uncultured... 36 1.9
UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=... 36 1.9
>UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63;
Eukaryota|Rep: 40S ribosomal protein S17 - Drosophila
melanogaster (Fruit fly)
Length = 131
Score = 160 bits (388), Expect = 5e-38
Identities = 76/83 (91%), Positives = 78/83 (93%)
Frame = +2
Query: 146 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 325
IEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQEE
Sbjct: 17 IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEE 76
Query: 326 ERERRDNYVPEVSALEHDIIEVD 394
ERERRDNYVP VSALE DIIEVD
Sbjct: 77 ERERRDNYVPAVSALEQDIIEVD 99
Score = 41.9 bits (94), Expect = 0.022
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +3
Query: 402 TKDMLKMLDFNNINGLQLTQPAT 470
TK+MLK+LDF+NI GLQLTQP T
Sbjct: 102 TKEMLKLLDFHNIRGLQLTQPNT 124
>UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105;
Eukaryota|Rep: 40S ribosomal protein S17 - Homo sapiens
(Human)
Length = 135
Score = 144 bits (348), Expect = 4e-33
Identities = 67/84 (79%), Positives = 75/84 (89%)
Frame = +2
Query: 146 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 325
IEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76
Query: 326 ERERRDNYVPEVSALEHDIIEVDP 397
ERERRDNYVPEVSAL+ +IIEVDP
Sbjct: 77 ERERRDNYVPEVSALDQEIIEVDP 100
Score = 36.7 bits (81), Expect = 0.82
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = +3
Query: 396 PXTKDMLKMLDFNNINGLQLTQP 464
P TK+MLK+LDF +++ LQ+TQP
Sbjct: 100 PDTKEMLKLLDFGSLSNLQVTQP 122
>UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Rattus norvegicus
Length = 190
Score = 133 bits (321), Expect = 7e-30
Identities = 62/84 (73%), Positives = 71/84 (84%)
Frame = +2
Query: 146 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 325
IEKYYTRL DF TNK +CEEIAIIP++ LRNKI + THLM+R++ VRGISIKLQEE
Sbjct: 72 IEKYYTRLGNDFHTNKHVCEEIAIIPSENLRNKITSYVTHLMKRIQRGPVRGISIKLQEE 131
Query: 326 ERERRDNYVPEVSALEHDIIEVDP 397
ERERRDNYVPE SAL+ +IIEVDP
Sbjct: 132 ERERRDNYVPEGSALDQEIIEVDP 155
>UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative,
expressed; n=7; Eukaryota|Rep: 40S ribosomal protein
S17-4, putative, expressed - Oryza sativa subsp.
japonica (Rice)
Length = 141
Score = 123 bits (296), Expect = 7e-27
Identities = 56/83 (67%), Positives = 71/83 (85%)
Frame = +2
Query: 146 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 325
IEKYY+R+TLDF TNK++ EE++I+P+K LRNK+AGF THLMRR++ VRGIS+KLQEE
Sbjct: 17 IEKYYSRMTLDFHTNKKVLEEVSILPSKRLRNKVAGFTTHLMRRIQRGPVRGISLKLQEE 76
Query: 326 ERERRDNYVPEVSALEHDIIEVD 394
ERERR ++VPE SALE + I VD
Sbjct: 77 ERERRMDFVPEKSALEVEEIRVD 99
>UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365;
n=3; Homo/Pan/Gorilla group|Rep: Uncharacterized protein
ENSP00000351365 - Homo sapiens (Human)
Length = 135
Score = 117 bits (281), Expect = 5e-25
Identities = 58/91 (63%), Positives = 69/91 (75%)
Frame = +2
Query: 146 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 325
IEKY TRL DF TNK +CE IAII +K LRNKI G+ HLM+R+R VRGISIKLQEE
Sbjct: 18 IEKYCTRLGNDFYTNKCVCE-IAIILSKKLRNKIVGYVKHLMKRIRKGPVRGISIKLQEE 76
Query: 326 ERERRDNYVPEVSALEHDIIEVDPXHQGYVE 418
ERE RDNYVPE+S L+ + +EVDP + +E
Sbjct: 77 ERENRDNYVPEISVLDQETVEVDPDTKEMLE 107
>UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_9,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 178
Score = 111 bits (266), Expect = 3e-23
Identities = 52/96 (54%), Positives = 72/96 (75%)
Frame = +2
Query: 146 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 325
IEKYY +LT DF NK+I E+ +P+K LRNKIAGFATHL++R++ V+GIS+K+QEE
Sbjct: 57 IEKYYMKLTSDFHFNKKILSEVGQVPSKKLRNKIAGFATHLLKRIQTGSVKGISLKIQEE 116
Query: 326 ERERRDNYVPEVSALEHDIIEVDPXHQGYVEDAGLQ 433
ERERR +YVPE S+++ D + D + +E AGL+
Sbjct: 117 ERERRLDYVPEKSSVDIDNLRGDQDVKRMLEKAGLE 152
>UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Macaca mulatta
Length = 189
Score = 108 bits (260), Expect = 2e-22
Identities = 50/83 (60%), Positives = 64/83 (77%)
Frame = +2
Query: 149 EKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEE 328
++YYT L +F +NKR CEE II +K L NKI G+ HLM+R++ VRGISIKLQE+E
Sbjct: 72 DQYYTPLGKNFCSNKRACEETTIILSKKLCNKIVGYVMHLMKRIQKDPVRGISIKLQEKE 131
Query: 329 RERRDNYVPEVSALEHDIIEVDP 397
RER+DNYVPE+SA + + IEVDP
Sbjct: 132 RERKDNYVPEISATDQETIEVDP 154
>UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal
protein S17; n=8; Eutheria|Rep: PREDICTED: similar to
ribosomal protein S17 - Mus musculus
Length = 228
Score = 106 bits (254), Expect = 9e-22
Identities = 49/84 (58%), Positives = 67/84 (79%)
Frame = +2
Query: 146 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 325
+ +Y+TRL DF T+K +CEEI I+P+K L++KIAG+ THL ++++ VRGISIKLQEE
Sbjct: 54 VPEYHTRLGNDFYTDKHVCEEITIVPSKKLQSKIAGYVTHLTKQIQRGPVRGISIKLQEE 113
Query: 326 ERERRDNYVPEVSALEHDIIEVDP 397
ERR +Y+PEVSAL+ +I EVDP
Sbjct: 114 --ERRADYIPEVSALDQEITEVDP 135
Score = 34.3 bits (75), Expect = 4.4
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +3
Query: 396 PXTKDMLKMLDFNNINGLQLTQP 464
P TK+MLK+LD +++ LQ+TQP
Sbjct: 135 PATKEMLKLLDLGSLSNLQVTQP 157
>UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=6;
Trypanosomatidae|Rep: 40S ribosomal protein S17,
putative - Leishmania major
Length = 143
Score = 91.9 bits (218), Expect = 2e-17
Identities = 40/76 (52%), Positives = 56/76 (73%)
Frame = +2
Query: 146 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 325
+EKYY++L DF NKR+ ++ I +K L+NKIAG+ TH+M+RL VRGIS+KLQEE
Sbjct: 17 VEKYYSKLNFDFYQNKRVIMDVTIAESKKLKNKIAGYTTHIMKRLARGPVRGISLKLQEE 76
Query: 326 ERERRDNYVPEVSALE 373
ERERR ++ P S ++
Sbjct: 77 ERERRMDHAPATSDVD 92
>UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Canis familiaris
Length = 177
Score = 84.6 bits (200), Expect = 3e-15
Identities = 44/87 (50%), Positives = 59/87 (67%)
Frame = +2
Query: 146 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 325
+EK+Y RL F TNKR+CE+IAI P+K LRN IAG+ HL +R++ V +
Sbjct: 66 LEKHYPRLGSHFHTNKRVCEDIAISPSKKLRNGIAGYVAHLTKRIQQGPV------ARGG 119
Query: 326 ERERRDNYVPEVSALEHDIIEVDPXHQ 406
ER +++ YVPEVSAL+ +IIEVDP Q
Sbjct: 120 ER-KKETYVPEVSALDQEIIEVDPDTQ 145
Score = 35.1 bits (77), Expect = 2.5
Identities = 13/23 (56%), Positives = 20/23 (86%)
Frame = +3
Query: 396 PXTKDMLKMLDFNNINGLQLTQP 464
P T++MLK+LDF +++ LQ+TQP
Sbjct: 142 PDTQEMLKLLDFGSLSNLQVTQP 164
>UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S17
- Encephalitozoon cuniculi
Length = 120
Score = 76.2 bits (179), Expect = 1e-12
Identities = 33/82 (40%), Positives = 54/82 (65%)
Frame = +2
Query: 149 EKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEE 328
EKY+ RL FD N + +++A++ +K L+N+IAG+ T L +++ + IK EEE
Sbjct: 18 EKYFQRLDSTFDHNLLVVQDVAVVQSKKLKNEIAGYLTSLYKKILKGTYNKVYIKSHEEE 77
Query: 329 RERRDNYVPEVSALEHDIIEVD 394
RER++N +P+ S L+ D +EVD
Sbjct: 78 RERKENVIPKESMLDVDCVEVD 99
>UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)); n=2;
Eutheria|Rep: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)) - Homo
sapiens (Human)
Length = 121
Score = 70.9 bits (166), Expect = 4e-11
Identities = 37/82 (45%), Positives = 50/82 (60%)
Frame = +2
Query: 149 EKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEE 328
EKYY L DF +K +C+EI I ++ L +KIAG+ THLM+ +R S + +S
Sbjct: 18 EKYYIYLGNDFYMSKYVCKEITITSSRELCSKIAGYVTHLMKEIRGSDSQ-VSPSSCRRR 76
Query: 329 RERRDNYVPEVSALEHDIIEVD 394
R R NYVPE S L+ +I EVD
Sbjct: 77 RRDRSNYVPEGSVLDQEITEVD 98
>UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S17, putative -
Babesia bovis
Length = 145
Score = 60.5 bits (140), Expect = 6e-08
Identities = 28/47 (59%), Positives = 37/47 (78%)
Frame = +2
Query: 254 FATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVD 394
F HLMRR++ VRGIS+KLQEEERERR ++VPE S ++ +I+VD
Sbjct: 66 FIIHLMRRIQKGPVRGISLKLQEEERERRMDFVPERSEVDVPLIQVD 112
>UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellular
organisms|Rep: 30S ribosomal protein S17e -
Methanococcus jannaschii
Length = 62
Score = 59.7 bits (138), Expect = 1e-07
Identities = 27/46 (58%), Positives = 35/46 (76%)
Frame = +2
Query: 146 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLR 283
I+KY T DF+TNKR+ EE+A I TK LRN+IAG+ TH MR+L+
Sbjct: 17 IKKYRDLFTTDFETNKRVLEEVAQISTKRLRNRIAGYITHKMRQLQ 62
>UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Rep:
RpS17 protein - Guillardia theta (Cryptomonas phi)
Length = 118
Score = 58.4 bits (135), Expect = 2e-07
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = +2
Query: 152 KYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMR 274
KY+ LT+DF NK C+EIA+I +K LRNKIAG+ THL++
Sbjct: 19 KYFKHLTIDFQENKFFCDEIALITSKSLRNKIAGYVTHLIK 59
>UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6;
Archaea|Rep: 30S ribosomal protein S17e - Methanopyrus
kandleri
Length = 70
Score = 52.4 bits (120), Expect = 2e-05
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = +2
Query: 146 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRG 301
+EKY LT DF+ NK++ E +A TK LRN IAG+ THLMR + G
Sbjct: 17 VEKYEEYLTTDFEHNKKVVEIVARPKTKKLRNMIAGYVTHLMRLKERQREEG 68
>UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17e - Thermofilum
pendens (strain Hrk 5)
Length = 95
Score = 50.0 bits (114), Expect = 8e-05
Identities = 27/72 (37%), Positives = 45/72 (62%)
Frame = +2
Query: 146 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 325
+E+Y T+DF+ NK+ EIA IP++ LRN+IAG+ T L+RR + + R +S++ QE
Sbjct: 17 VEQYPDAFTVDFELNKKKLMEIADIPSRQLRNQIAGYITRLVRRKKLIEQR-LSMR-QEI 74
Query: 326 ERERRDNYVPEV 361
+ Y+ +
Sbjct: 75 TMTDEEEYIRRI 86
>UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S17e -
Methanobacterium thermoautotrophicum
Length = 62
Score = 48.0 bits (109), Expect = 3e-04
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = +2
Query: 146 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 271
IE + + T DFDTNK++ EE + + TK LRNKIAG+ T ++
Sbjct: 17 IETHPGKFTDDFDTNKKLVEEFSTVSTKHLRNKIAGYITRII 58
>UniRef50_UPI00015531AB Cluster: PREDICTED: similar to
OTTHUMP00000016594; n=1; Mus musculus|Rep: PREDICTED:
similar to OTTHUMP00000016594 - Mus musculus
Length = 128
Score = 46.0 bits (104), Expect = 0.001
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +2
Query: 149 EKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRL-RHSQVRGISIKLQEE 325
EK YT L+ D K +C+EI I P+K L KIAGF LM+++ R+ +++ +S L
Sbjct: 35 EKNYTGLSNDLHNKKDLCKEIIIFPSKKL-YKIAGFVMRLMKQIQRNYKLQELSSSL-AA 92
Query: 326 ERERRDNYVPEVSALEHDIIEVDP 397
ER +D V L+ +++ +P
Sbjct: 93 ERISKDIVCQNVGFLQINMLMSEP 116
>UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S17e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 103
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +2
Query: 146 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 325
+E Y T DF+ NKRI ++ P+K LRN+IAG+ T L+R + + I+ Q
Sbjct: 17 VEMYPDIFTEDFEHNKRIVSQLIETPSKKLRNQIAGYVTRLIRLYKRTGELQYLIEQQHA 76
Query: 326 ERER 337
E R
Sbjct: 77 EEFR 80
>UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Homo sapiens|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Homo sapiens
Length = 53
Score = 44.0 bits (99), Expect = 0.005
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2
Query: 176 DFDTNKRICEEIAIIPTKPLRNKIAGFATH 265
+F NKR+C+EIAIIP+K LRNK AG H
Sbjct: 21 NFHRNKRVCKEIAIIPSKKLRNKKAGLLWH 50
>UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2;
Thermoprotei|Rep: 30S ribosomal protein S17e - Aeropyrum
pernix
Length = 74
Score = 42.7 bits (96), Expect = 0.013
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +2
Query: 146 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 271
+EKY T DF+ NKR+ ++ +K LRN+IAG+ THL+
Sbjct: 17 LEKYPDLFTGDFEHNKRVVSQLIEYRSKKLRNQIAGYITHLV 58
>UniRef50_Q8PXL8 Cluster: 30S ribosomal protein S17e; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 64
Score = 39.9 bits (89), Expect = 0.088
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +2
Query: 146 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLR 283
IE Y T DF+TNK + + I +K +RN++AG+ T + R++
Sbjct: 17 IENYGEVFTKDFETNKALVTKYTTIESKIIRNRVAGYVTRKVARMK 62
>UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5;
Archaea|Rep: 30S ribosomal protein S17e - Archaeoglobus
fulgidus
Length = 65
Score = 39.1 bits (87), Expect = 0.15
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +2
Query: 146 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 277
++KY T +FD NKR+ E+ I +K +RN++AG+ T + R
Sbjct: 17 LKKYPEVFTGNFDENKRLVAELTNIQSKTVRNRVAGYITRRVNR 60
>UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S17e - Candidatus Nitrosopumilus maritimus SCM1
Length = 129
Score = 38.7 bits (86), Expect = 0.20
Identities = 15/44 (34%), Positives = 31/44 (70%)
Frame = +2
Query: 146 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 277
+E + ++ DF NK+I E++I+ +K L+N+IAG+ T+ +++
Sbjct: 12 LETHKSKFGEDFADNKKILNEVSIVRSKGLKNEIAGYITNYIKK 55
>UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2;
Archaea|Rep: 30S ribosomal protein S17e - Haloarcula
marismortui (Halobacterium marismortui)
Length = 63
Score = 38.3 bits (85), Expect = 0.27
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +2
Query: 146 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 271
+E+Y DF+ NK + EE+ I +K +RN+IAG+ T M
Sbjct: 16 MERYPDAFGADFEHNKDVVEELTNIESKGVRNRIAGYVTRKM 57
>UniRef50_Q64D47 Cluster: Putative uncharacterized protein; n=3;
environmental samples|Rep: Putative uncharacterized
protein - uncultured archaeon GZfos19A5
Length = 122
Score = 37.5 bits (83), Expect = 0.47
Identities = 25/55 (45%), Positives = 30/55 (54%)
Frame = -3
Query: 264 CVANPAILFLRGLVGMIAISSHILLFVSKSSVNLV*YFSIIIFAAFLTVLVRTRP 100
CV PAILFL L+ SS LF SKSSV+ F+ FA+F T + T P
Sbjct: 18 CVIYPAILFLTPLLSTFVYSSTNFLFSSKSSVHSATSFN-SCFASFFTYVGLTVP 71
>UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 13 SCAF7124, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 372
Score = 36.7 bits (81), Expect = 0.82
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = +3
Query: 396 PXTKDMLKMLDFNNINGLQLTQP 464
P TK+MLK+LDF +++ LQ+TQP
Sbjct: 339 PDTKEMLKLLDFGSLSNLQVTQP 361
>UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2;
Archaea|Rep: 30s ribosomal protein S17E - Uncultured
methanogenic archaeon RC-I
Length = 65
Score = 36.7 bits (81), Expect = 0.82
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2
Query: 146 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 271
+ +Y DF NK E++A + TK +RN+IAG+ T M
Sbjct: 17 LRQYPNEFGSDFTANKAKVEQLASVQTKEVRNRIAGYVTRKM 58
>UniRef50_Q64BW7 Cluster: Ribosomal protein S17E; n=1; uncultured
archaeon GZfos26F9|Rep: Ribosomal protein S17E -
uncultured archaeon GZfos26F9
Length = 76
Score = 35.5 bits (78), Expect = 1.9
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 152 KYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATH 265
K T DF+ NK++ ++ + +K +RN+IAG+ TH
Sbjct: 18 KEVAECTDDFELNKKLVDKYTNVESKDVRNRIAGYITH 55
>UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=4;
Methanomicrobiales|Rep: Ribosomal protein S17E-like
protein - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 64
Score = 35.5 bits (78), Expect = 1.9
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +2
Query: 146 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFAT 262
+E++ +FD NK++ EI I +K +RN++AG+ T
Sbjct: 16 LEQHGKSFNGNFDDNKKVVAEITTIESKMIRNRVAGYVT 54
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 543,630,007
Number of Sequences: 1657284
Number of extensions: 8472505
Number of successful extensions: 19627
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 19161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19616
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 83211448033
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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