Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_F03
         (911 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0066 - 537729-538163                                            123   2e-28
10_07_0174 + 13815478-13815903                                        123   2e-28
06_03_1119 + 27760412-27760527,27760851-27761010,27761283-277614...    31   1.7  
06_01_0889 - 6807449-6809257                                           29   3.9  

>03_01_0066 - 537729-538163
          Length = 144

 Score =  123 bits (297), Expect = 2e-28
 Identities = 56/83 (67%), Positives = 72/83 (86%)
 Frame = +2

Query: 146 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 325
           IEKYY+R+TLDF TNK++ EE++I+P+K LRNK+AGF+THLMRR++   VRGIS+KLQEE
Sbjct: 17  IEKYYSRMTLDFHTNKKVLEEVSILPSKRLRNKVAGFSTHLMRRIQRGPVRGISLKLQEE 76

Query: 326 ERERRDNYVPEVSALEHDIIEVD 394
           ERERR ++VP+ SALE D I VD
Sbjct: 77  ERERRMDFVPDRSALEVDDIRVD 99


>10_07_0174 + 13815478-13815903
          Length = 141

 Score =  123 bits (296), Expect = 2e-28
 Identities = 56/83 (67%), Positives = 71/83 (85%)
 Frame = +2

Query: 146 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 325
           IEKYY+R+TLDF TNK++ EE++I+P+K LRNK+AGF THLMRR++   VRGIS+KLQEE
Sbjct: 17  IEKYYSRMTLDFHTNKKVLEEVSILPSKRLRNKVAGFTTHLMRRIQRGPVRGISLKLQEE 76

Query: 326 ERERRDNYVPEVSALEHDIIEVD 394
           ERERR ++VPE SALE + I VD
Sbjct: 77  ERERRMDFVPEKSALEVEEIRVD 99


>06_03_1119 +
           27760412-27760527,27760851-27761010,27761283-27761449,
           27761525-27761629,27762097-27762864,27762942-27763131,
           27763763-27763940,27764106-27764497
          Length = 691

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +2

Query: 305 SIKLQEEERERRDNYVPEVSALEHDIIEVDPXHQGYVED 421
           +IK +      R  Y  E   L +D+I++DP H+ Y ED
Sbjct: 455 AIKSRGSSLVERKGYCEESLGLFNDLIDLDPSHKRYYED 493


>06_01_0889 - 6807449-6809257
          Length = 602

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +2

Query: 278 LRHSQVRGI-SIKLQEEERERRDNYVPEVSALEHDIIEVD 394
           LRH Q R I ++ +    R R + YVP+     HD+ E D
Sbjct: 487 LRHPQAREIYAMAVDMVSRIRAEGYVPDTGEALHDVAEED 526


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,750,482
Number of Sequences: 37544
Number of extensions: 229369
Number of successful extensions: 525
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 525
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)