Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_F03
(911 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M18000-1|AAA60285.1| 135|Homo sapiens RPS17 protein. 144 5e-34
M13932-1|AAA60284.1| 135|Homo sapiens RPS17 protein. 144 5e-34
BC071928-1|AAH71928.1| 135|Homo sapiens ribosomal protein S17 p... 144 5e-34
BC070222-1|AAH70222.1| 135|Homo sapiens ribosomal protein S17 p... 144 5e-34
BC062715-1|AAH62715.1| 135|Homo sapiens ribosomal protein S17 p... 144 5e-34
BC049824-1|AAH49824.1| 135|Homo sapiens ribosomal protein S17 p... 144 5e-34
BC022370-1|AAH22370.1| 135|Homo sapiens ribosomal protein S17 p... 144 5e-34
BC019899-1|AAH19899.1| 135|Homo sapiens ribosomal protein S17 p... 144 5e-34
BC009407-1|AAH09407.1| 135|Homo sapiens ribosomal protein S17 p... 144 5e-34
AK026570-1|BAB15501.1| 135|Homo sapiens atory regulatory compon... 144 5e-34
AL049693-2|CAB89564.1| 135|Homo sapiens protein ( Human DNA seq... 126 1e-28
AL031177-9|CAO03368.1| 231|Homo sapiens ATG4 autophagy related ... 31 7.7
>M18000-1|AAA60285.1| 135|Homo sapiens RPS17 protein.
Length = 135
Score = 144 bits (348), Expect = 5e-34
Identities = 67/84 (79%), Positives = 75/84 (89%)
Frame = +2
Query: 146 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 325
IEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76
Query: 326 ERERRDNYVPEVSALEHDIIEVDP 397
ERERRDNYVPEVSAL+ +IIEVDP
Sbjct: 77 ERERRDNYVPEVSALDQEIIEVDP 100
Score = 36.7 bits (81), Expect = 0.12
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = +3
Query: 396 PXTKDMLKMLDFNNINGLQLTQP 464
P TK+MLK+LDF +++ LQ+TQP
Sbjct: 100 PDTKEMLKLLDFGSLSNLQVTQP 122
>M13932-1|AAA60284.1| 135|Homo sapiens RPS17 protein.
Length = 135
Score = 144 bits (348), Expect = 5e-34
Identities = 67/84 (79%), Positives = 75/84 (89%)
Frame = +2
Query: 146 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 325
IEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76
Query: 326 ERERRDNYVPEVSALEHDIIEVDP 397
ERERRDNYVPEVSAL+ +IIEVDP
Sbjct: 77 ERERRDNYVPEVSALDQEIIEVDP 100
Score = 36.7 bits (81), Expect = 0.12
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = +3
Query: 396 PXTKDMLKMLDFNNINGLQLTQP 464
P TK+MLK+LDF +++ LQ+TQP
Sbjct: 100 PDTKEMLKLLDFGSLSNLQVTQP 122
>BC071928-1|AAH71928.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 144 bits (348), Expect = 5e-34
Identities = 67/84 (79%), Positives = 75/84 (89%)
Frame = +2
Query: 146 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 325
IEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76
Query: 326 ERERRDNYVPEVSALEHDIIEVDP 397
ERERRDNYVPEVSAL+ +IIEVDP
Sbjct: 77 ERERRDNYVPEVSALDQEIIEVDP 100
Score = 36.7 bits (81), Expect = 0.12
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = +3
Query: 396 PXTKDMLKMLDFNNINGLQLTQP 464
P TK+MLK+LDF +++ LQ+TQP
Sbjct: 100 PDTKEMLKLLDFGSLSNLQVTQP 122
>BC070222-1|AAH70222.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 144 bits (348), Expect = 5e-34
Identities = 67/84 (79%), Positives = 75/84 (89%)
Frame = +2
Query: 146 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 325
IEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76
Query: 326 ERERRDNYVPEVSALEHDIIEVDP 397
ERERRDNYVPEVSAL+ +IIEVDP
Sbjct: 77 ERERRDNYVPEVSALDQEIIEVDP 100
Score = 36.7 bits (81), Expect = 0.12
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = +3
Query: 396 PXTKDMLKMLDFNNINGLQLTQP 464
P TK+MLK+LDF +++ LQ+TQP
Sbjct: 100 PDTKEMLKLLDFGSLSNLQVTQP 122
>BC062715-1|AAH62715.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 144 bits (348), Expect = 5e-34
Identities = 67/84 (79%), Positives = 75/84 (89%)
Frame = +2
Query: 146 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 325
IEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76
Query: 326 ERERRDNYVPEVSALEHDIIEVDP 397
ERERRDNYVPEVSAL+ +IIEVDP
Sbjct: 77 ERERRDNYVPEVSALDQEIIEVDP 100
Score = 36.7 bits (81), Expect = 0.12
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = +3
Query: 396 PXTKDMLKMLDFNNINGLQLTQP 464
P TK+MLK+LDF +++ LQ+TQP
Sbjct: 100 PDTKEMLKLLDFGSLSNLQVTQP 122
>BC049824-1|AAH49824.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 144 bits (348), Expect = 5e-34
Identities = 67/84 (79%), Positives = 75/84 (89%)
Frame = +2
Query: 146 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 325
IEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76
Query: 326 ERERRDNYVPEVSALEHDIIEVDP 397
ERERRDNYVPEVSAL+ +IIEVDP
Sbjct: 77 ERERRDNYVPEVSALDQEIIEVDP 100
Score = 36.7 bits (81), Expect = 0.12
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = +3
Query: 396 PXTKDMLKMLDFNNINGLQLTQP 464
P TK+MLK+LDF +++ LQ+TQP
Sbjct: 100 PDTKEMLKLLDFGSLSNLQVTQP 122
>BC022370-1|AAH22370.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 144 bits (348), Expect = 5e-34
Identities = 67/84 (79%), Positives = 75/84 (89%)
Frame = +2
Query: 146 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 325
IEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76
Query: 326 ERERRDNYVPEVSALEHDIIEVDP 397
ERERRDNYVPEVSAL+ +IIEVDP
Sbjct: 77 ERERRDNYVPEVSALDQEIIEVDP 100
Score = 36.7 bits (81), Expect = 0.12
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = +3
Query: 396 PXTKDMLKMLDFNNINGLQLTQP 464
P TK+MLK+LDF +++ LQ+TQP
Sbjct: 100 PDTKEMLKLLDFGSLSNLQVTQP 122
>BC019899-1|AAH19899.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 144 bits (348), Expect = 5e-34
Identities = 67/84 (79%), Positives = 75/84 (89%)
Frame = +2
Query: 146 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 325
IEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76
Query: 326 ERERRDNYVPEVSALEHDIIEVDP 397
ERERRDNYVPEVSAL+ +IIEVDP
Sbjct: 77 ERERRDNYVPEVSALDQEIIEVDP 100
Score = 36.7 bits (81), Expect = 0.12
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = +3
Query: 396 PXTKDMLKMLDFNNINGLQLTQP 464
P TK+MLK+LDF +++ LQ+TQP
Sbjct: 100 PDTKEMLKLLDFGSLSNLQVTQP 122
>BC009407-1|AAH09407.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 144 bits (348), Expect = 5e-34
Identities = 67/84 (79%), Positives = 75/84 (89%)
Frame = +2
Query: 146 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 325
IEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76
Query: 326 ERERRDNYVPEVSALEHDIIEVDP 397
ERERRDNYVPEVSAL+ +IIEVDP
Sbjct: 77 ERERRDNYVPEVSALDQEIIEVDP 100
Score = 36.7 bits (81), Expect = 0.12
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = +3
Query: 396 PXTKDMLKMLDFNNINGLQLTQP 464
P TK+MLK+LDF +++ LQ+TQP
Sbjct: 100 PDTKEMLKLLDFGSLSNLQVTQP 122
>AK026570-1|BAB15501.1| 135|Homo sapiens atory regulatory component
Gs of adenylyl protein.
Length = 135
Score = 144 bits (348), Expect = 5e-34
Identities = 67/84 (79%), Positives = 75/84 (89%)
Frame = +2
Query: 146 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 325
IEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76
Query: 326 ERERRDNYVPEVSALEHDIIEVDP 397
ERERRDNYVPEVSAL+ +IIEVDP
Sbjct: 77 ERERRDNYVPEVSALDQEIIEVDP 100
Score = 36.7 bits (81), Expect = 0.12
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = +3
Query: 396 PXTKDMLKMLDFNNINGLQLTQP 464
P TK+MLK+LDF +++ LQ+TQP
Sbjct: 100 PDTKEMLKLLDFGSLSNLQVTQP 122
>AL049693-2|CAB89564.1| 135|Homo sapiens protein ( Human DNA
sequence from clone RP4-753D5 on chromosome 6p12.1-12.3
Contains the 3' end of the TFAP2B gene for transcription
factor AP-2 sium/caltranscription factor AP-2 beta
(activating enhancer binding protein 2 beta)).
Length = 135
Score = 126 bits (304), Expect = 1e-28
Identities = 58/84 (69%), Positives = 69/84 (82%)
Frame = +2
Query: 146 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 325
IEKYY L DF TNK +C+EIAIIP+K L NK AG+ THLM++++ VRGISIKLQEE
Sbjct: 17 IEKYYMHLGNDFHTNKHMCKEIAIIPSKKLHNKTAGYVTHLMKQIQRGPVRGISIKLQEE 76
Query: 326 ERERRDNYVPEVSALEHDIIEVDP 397
RERRDNYVPE+SAL+ +IIEVDP
Sbjct: 77 VRERRDNYVPEISALDQEIIEVDP 100
Score = 36.3 bits (80), Expect = 0.15
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +3
Query: 396 PXTKDMLKMLDFNNINGLQLTQP 464
P TK+MLK+LDF ++ LQ+TQP
Sbjct: 100 PDTKEMLKLLDFGGLSNLQVTQP 122
>AL031177-9|CAO03368.1| 231|Homo sapiens ATG4 autophagy related 4
homolog A (S. cerevisiae) protein.
Length = 231
Score = 30.7 bits (66), Expect = 7.7
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -2
Query: 466 AGCVSCRPLILLKSSIFNISLVXGVYFDDVMFESRHFWDIVVTPLTLLFLK-FDRDSSHL 290
A C + +PL+L+ I+ + VY D S W + + P LL LK +R + L
Sbjct: 164 AYCSAWKPLLLIVPLRLGINQINPVYVDAFKVTSSSSWTL-IQPRPLLTLKRMERLMTRL 222
Query: 289 RVSETPH 269
++ +PH
Sbjct: 223 SIACSPH 229
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,413,351
Number of Sequences: 237096
Number of extensions: 1285631
Number of successful extensions: 3045
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3045
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11825849886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -