Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_F02
(905 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_1153 + 30787574-30787608,30787982-30788089,30788651-307886... 32 0.55
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 31 1.3
11_02_0065 - 7938007-7938393,7939292-7939435,7940597-7940665,794... 30 2.9
02_05_0686 - 30900748-30902167,30903442-30904742 30 2.9
07_01_0862 - 7172083-7172931 29 5.1
03_02_0184 + 6232429-6232515,6232634-6232751,6233198-6233286,623... 29 6.7
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 28 8.9
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 28 8.9
06_01_0805 + 6043248-6043551,6043654-6043755,6044858-6044964,604... 28 8.9
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 28 8.9
01_05_0423 + 22032940-22033695 28 8.9
>03_05_1153 +
30787574-30787608,30787982-30788089,30788651-30788689,
30789181-30789184,30789496-30789580,30789609-30790321
Length = 327
Score = 32.3 bits (70), Expect = 0.55
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +1
Query: 337 PFPKISKEPXQXPKXKXKXXXEXSKXKIXTHXPRKPPKGQPXVLKKXPPPXP 492
P P +EP Q P K + E I P P+ +P KK PPP P
Sbjct: 183 PEPPKKEEP-QPPPPKEEEKPEPPPAVIIVEPPAPAPEPEPEPPKKEPPPPP 233
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 654 PPXGVXKKFPXGAPXPPQXXXXLFXPPPPP 743
PP GV P P PP PPPPP
Sbjct: 97 PPYGVNSSQPPPPPPPPPSPPPSAPPPPPP 126
>11_02_0065 -
7938007-7938393,7939292-7939435,7940597-7940665,
7940762-7940809,7941488-7941584,7941688-7941767,
7941841-7941912,7942256-7942350,7943903-7943984,
7945176-7945209,7945255-7945262,7945657-7946058
Length = 505
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +3
Query: 654 PPXGVXKKFPXGAPXPPQXXXXLFXPPPPP 743
PP V + F P PP PPPPP
Sbjct: 55 PPPQVIRVFAAAPPPPPAAFFAAVPPPPPP 84
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 648 KNPPXGVXKKFPXGAPXPPQXXXXLFXPPPPPK 746
K PP K P P PP PPPPPK
Sbjct: 351 KGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPK 383
>07_01_0862 - 7172083-7172931
Length = 282
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +3
Query: 654 PPXGVXKKFPXGAPXPPQXXXXLFXPPPPPKK 749
PP FP P PP+ L+ PP PPKK
Sbjct: 151 PPRKKAMLFPL--PLPPRKKPLLYPPPLPPKK 180
>03_02_0184 +
6232429-6232515,6232634-6232751,6233198-6233286,
6233364-6233428,6233520-6233608,6234167-6234300,
6234387-6235133
Length = 442
Score = 28.7 bits (61), Expect = 6.7
Identities = 23/91 (25%), Positives = 36/91 (39%)
Frame = +1
Query: 91 SALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGVHKTXKNSLTRSPS 270
SA S S + ++ +HR P + +T+ Q P Q +T + S +SPS
Sbjct: 300 SARSFSFASPAARSTTTPPVHRGAPLTPFSTKGG---QKAPAPAQQFPRTPRPSFLQSPS 356
Query: 271 QXRTXLXQGLEGRXQFXVEXFXPFPKISKEP 363
G R + E F PF + + P
Sbjct: 357 MLFAFKKDGQASRGERERESFLPFLRFYRRP 387
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 681 PXGAPXPPQXXXXLFXPPPPPKK 749
P GAP PP PPPPP +
Sbjct: 620 PPGAPPPPPPPGKPGGPPPPPPR 642
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 654 PPXGVXKKFPXGAPXPPQXXXXLFXPPPPP 743
PP KK P P PPQ PPPP
Sbjct: 753 PPLMTGKKAPAPPPPPPQAPKPPGTVPPPP 782
>06_01_0805 +
6043248-6043551,6043654-6043755,6044858-6044964,
6045687-6045824,6046340-6046651
Length = 320
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +1
Query: 655 PPGGFXKNSXXXPPPPXXXXXXFXNPPPP 741
PP +S PPPP +PPPP
Sbjct: 26 PPAASDPSSPPPPPPPVAVAAATADPPPP 54
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 681 PXGAPXPPQXXXXLFXPPPPP 743
P GAP PP PPPPP
Sbjct: 1201 PPGAPAPPMPPGVPGGPPPPP 1221
>01_05_0423 + 22032940-22033695
Length = 251
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Frame = +3
Query: 645 KKNPPXGVXKK--FPXGAPXPPQXXXXL-FXPPPPP 743
++ PP V F P PPQ L F PPPPP
Sbjct: 151 QQQPPVAVASNGGFLPSPPPPPQGQQQLLFLPPPPP 186
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.137 0.429
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,950,660
Number of Sequences: 37544
Number of extensions: 366492
Number of successful extensions: 1569
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1262
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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