Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_F02
(905 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical p... 31 1.5
Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical p... 31 1.5
Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical p... 31 1.5
AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kin... 31 1.5
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.0
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.0
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.0
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 30 2.6
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.6
AL117202-27|CAB57897.1| 579|Caenorhabditis elegans Hypothetical... 29 4.6
AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical ... 29 4.6
AF031843-1|AAC13679.1| 579|Caenorhabditis elegans GLY9 protein. 29 4.6
Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical pr... 28 8.0
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 28 8.0
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 8.0
>Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 30.7 bits (66), Expect = 1.5
Identities = 27/70 (38%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +1
Query: 70 AVPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGVHKTX 243
A P S A S S+ HH S SL + G + A+ S L+QGHR P G
Sbjct: 68 AAPTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALG----S 122
Query: 244 KNSLTRSPSQ 273
N+LTRS Q
Sbjct: 123 GNTLTRSYHQ 132
>Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 30.7 bits (66), Expect = 1.5
Identities = 27/70 (38%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +1
Query: 70 AVPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGVHKTX 243
A P S A S S+ HH S SL + G + A+ S L+QGHR P G
Sbjct: 68 AAPTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALG----S 122
Query: 244 KNSLTRSPSQ 273
N+LTRS Q
Sbjct: 123 GNTLTRSYHQ 132
>Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 30.7 bits (66), Expect = 1.5
Identities = 27/70 (38%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +1
Query: 70 AVPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGVHKTX 243
A P S A S S+ HH S SL + G + A+ S L+QGHR P G
Sbjct: 68 AAPTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALG----S 122
Query: 244 KNSLTRSPSQ 273
N+LTRS Q
Sbjct: 123 GNTLTRSYHQ 132
>Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 30.7 bits (66), Expect = 1.5
Identities = 27/70 (38%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +1
Query: 70 AVPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGVHKTX 243
A P S A S S+ HH S SL + G + A+ S L+QGHR P G
Sbjct: 68 AAPTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALG----S 122
Query: 244 KNSLTRSPSQ 273
N+LTRS Q
Sbjct: 123 GNTLTRSYHQ 132
>Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 30.7 bits (66), Expect = 1.5
Identities = 27/70 (38%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +1
Query: 70 AVPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGVHKTX 243
A P S A S S+ HH S SL + G + A+ S L+QGHR P G
Sbjct: 68 AAPTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALG----S 122
Query: 244 KNSLTRSPSQ 273
N+LTRS Q
Sbjct: 123 GNTLTRSYHQ 132
>Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 30.7 bits (66), Expect = 1.5
Identities = 27/70 (38%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +1
Query: 70 AVPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGVHKTX 243
A P S A S S+ HH S SL + G + A+ S L+QGHR P G
Sbjct: 68 AAPTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALG----S 122
Query: 244 KNSLTRSPSQ 273
N+LTRS Q
Sbjct: 123 GNTLTRSYHQ 132
>AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kinase
2 protein.
Length = 796
Score = 30.7 bits (66), Expect = 1.5
Identities = 27/70 (38%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +1
Query: 70 AVPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGVHKTX 243
A P S A S S+ HH S SL + G + A+ S L+QGHR P G
Sbjct: 68 AAPTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALG----S 122
Query: 244 KNSLTRSPSQ 273
N+LTRS Q
Sbjct: 123 GNTLTRSYHQ 132
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 2.0
Identities = 26/87 (29%), Positives = 28/87 (32%)
Frame = +1
Query: 442 PPKGQPXVLKKXPPPXPXKXXGXXWXKTPXGXXPXFXKKGVXPXXXGKXXKKXXAPXXXG 621
PP G P + PPP P P P G+ P G P G
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPG----GLPPISGGPPPPP---PPPGG 767
Query: 622 XPXXXXXXXXTPPGGFXKNSXXXPPPP 702
P PPGGF K PPPP
Sbjct: 768 CPPPPPPP---PPGGF-KGGPPPPPPP 790
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 655 PPGGFXKNSXXXPPPPXXXXXXFXNPPPP 741
PPGG S PPPP PPPP
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 2.0
Identities = 26/87 (29%), Positives = 28/87 (32%)
Frame = +1
Query: 442 PPKGQPXVLKKXPPPXPXKXXGXXWXKTPXGXXPXFXKKGVXPXXXGKXXKKXXAPXXXG 621
PP G P + PPP P P P G+ P G P G
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPG----GLPPISGGPPPPP---PPPGG 767
Query: 622 XPXXXXXXXXTPPGGFXKNSXXXPPPP 702
P PPGGF K PPPP
Sbjct: 768 CPPPPPPP---PPGGF-KGGPPPPPPP 790
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 655 PPGGFXKNSXXXPPPPXXXXXXFXNPPPP 741
PPGG S PPPP PPPP
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 2.0
Identities = 26/87 (29%), Positives = 28/87 (32%)
Frame = +1
Query: 442 PPKGQPXVLKKXPPPXPXKXXGXXWXKTPXGXXPXFXKKGVXPXXXGKXXKKXXAPXXXG 621
PP G P + PPP P P P G+ P G P G
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPG----GLPPISGGPPPPP---PPPGG 350
Query: 622 XPXXXXXXXXTPPGGFXKNSXXXPPPP 702
P PPGGF K PPPP
Sbjct: 351 CPPPPPPP---PPGGF-KGGPPPPPPP 373
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 655 PPGGFXKNSXXXPPPPXXXXXXFXNPPPP 741
PPGG S PPPP PPPP
Sbjct: 330 PPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.9 bits (64), Expect = 2.6
Identities = 30/136 (22%), Positives = 34/136 (25%), Gaps = 1/136 (0%)
Frame = +1
Query: 337 PFPKISKEPXQXPKXKXKXXXEXSKXKIXTHXPRKP-PKGQPXVLKKXPPPXPXKXXGXX 513
P + P P K E S T P P P Q V PPP P
Sbjct: 19 PAATTPQPPPPPPPPKPAPYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPPAPYPQHAVP 78
Query: 514 WXKTPXGXXPXFXKKGVXPXXXGKXXKKXXAPXXXGXPXXXXXXXXTPPGGFXKNSXXXP 693
P P P + P P P + + P
Sbjct: 79 APAPPLASYPQ--NAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPP 136
Query: 694 PPPXXXXXXFXNPPPP 741
PPP PPPP
Sbjct: 137 PPPHYPPPPPHYPPPP 152
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 2.6
Identities = 28/107 (26%), Positives = 32/107 (29%), Gaps = 1/107 (0%)
Frame = +1
Query: 433 PRKPPKGQPXVLKKXPPPXPXKXXGXXWXKTPXGXXPXFXKKGVXPXXXGKXXKKXXAPX 612
P PPKG P + PP P +T G P P G P
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRT--GSPPPPPTGSPPPPPAG----GSPPPP 292
Query: 613 XXGXPXXXXXXXXTPP-GGFXKNSXXXPPPPXXXXXXFXNPPPPXKK 750
G P +PP G PPP PPPP +K
Sbjct: 293 RAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSP---PPPPRQK 336
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 2.6
Identities = 28/107 (26%), Positives = 32/107 (29%), Gaps = 1/107 (0%)
Frame = +1
Query: 433 PRKPPKGQPXVLKKXPPPXPXKXXGXXWXKTPXGXXPXFXKKGVXPXXXGKXXKKXXAPX 612
P PPKG P + PP P +T G P P G P
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRT--GSPPPPPTGSPPPPPAG----GSPPPP 313
Query: 613 XXGXPXXXXXXXXTPP-GGFXKNSXXXPPPPXXXXXXFXNPPPPXKK 750
G P +PP G PPP PPPP +K
Sbjct: 314 RAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSP---PPPPRQK 357
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 2.6
Identities = 28/107 (26%), Positives = 32/107 (29%), Gaps = 1/107 (0%)
Frame = +1
Query: 433 PRKPPKGQPXVLKKXPPPXPXKXXGXXWXKTPXGXXPXFXKKGVXPXXXGKXXKKXXAPX 612
P PPKG P + PP P +T G P P G P
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRT--GSPPPPPTGSPPPPPAG----GSPPPP 298
Query: 613 XXGXPXXXXXXXXTPP-GGFXKNSXXXPPPPXXXXXXFXNPPPPXKK 750
G P +PP G PPP PPPP +K
Sbjct: 299 RAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSP---PPPPRQK 342
>AL117202-27|CAB57897.1| 579|Caenorhabditis elegans Hypothetical
protein Y47D3A.23a protein.
Length = 579
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +2
Query: 113 YIMAAKFVVLFACIALAQGAMVRRDAPDFFKDIEHHTKEFIRLXKT 250
+++AA V F CI +A RR F DIE + +E +RL +T
Sbjct: 13 FVIAAFLTVAFFCI-VAYHRNDRRRTKFQFPDIEKYAEELVRLPET 57
>AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical
protein F56B3.8 protein.
Length = 321
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 151 HRSGPRSDGATRRSRLLQGHRTPHQGVH 234
HR GP GAT R+L+ R P++ H
Sbjct: 92 HRRGPADQGATYDERILEIRRDPNRTCH 119
>AF031843-1|AAC13679.1| 579|Caenorhabditis elegans GLY9 protein.
Length = 579
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +2
Query: 113 YIMAAKFVVLFACIALAQGAMVRRDAPDFFKDIEHHTKEFIRLXKT 250
+++AA V F CI +A RR F DIE + +E +RL +T
Sbjct: 13 FVIAAFLTVAFFCI-VAYHRNDRRRTKFQFPDIEKYAEELVRLPET 57
>Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +3
Query: 654 PPXGVXKKFPXGAPXPPQXXXXLFXPPPPP 743
PP KFP AP P F PPPPP
Sbjct: 118 PPKPEQYKFPP-APSVPLLHDRYFVPPPPP 146
>Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +3
Query: 654 PPXGVXKKFPXGAPXPPQXXXXLFXPPPPP 743
PP KFP AP P F PPPPP
Sbjct: 118 PPKPEQYKFPP-APSVPLLHDRYFVPPPPP 146
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 28.3 bits (60), Expect = 8.0
Identities = 17/53 (32%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Frame = +1
Query: 337 PFPKISKEPXQXPKXKXKXXXEXSKXKIXTHXPRKPPKGQPXVL-KKXPPPXP 492
P PK EP P K K E + P PK +P + K P P P
Sbjct: 8 PTPKPKSEPFPKPMPKSKPKSEPFPSPMPFPKPMPKPKPKPKPMPKHKPKPFP 60
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +1
Query: 655 PPGGFXKNSXXXPPPPXXXXXXFXNPPPP 741
PP +N PPPP PPPP
Sbjct: 564 PPPPLPQNLSGAPPPPPPPPPMLGGPPPP 592
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.137 0.429
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,052,805
Number of Sequences: 27780
Number of extensions: 254125
Number of successful extensions: 924
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 729
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
- SilkBase 1999-2023 -