Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_E24
(924 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 167 1e-41
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 167 1e-41
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 167 1e-41
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 167 1e-41
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 167 1e-41
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 167 1e-41
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 166 2e-41
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 164 7e-41
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 158 6e-39
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 142 4e-34
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 139 3e-33
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 100 1e-21
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 97 2e-20
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 97 2e-20
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 97 2e-20
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 94 1e-19
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 85 9e-17
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 60 2e-09
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 57 2e-08
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 35 0.071
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 35 0.071
U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protei... 31 1.5
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 31 1.5
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 31 1.5
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 31 1.5
U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protei... 30 2.0
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 29 3.6
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 167 bits (405), Expect = 1e-41
Identities = 100/168 (59%), Positives = 109/168 (64%), Gaps = 10/168 (5%)
Frame = +1
Query: 160 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGTEGL 318
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 319 LCRR*GTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLLQ*AACRPRGTPSPGSLX---A 489
R G +YP H + + +D+ R P + A
Sbjct: 61 SKR--GILTLKYPI---------EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 109
Query: 490 PLNPKANREKMTQIMFETFNTPAMYVXIQAVLSLYASGRTTGIVLDSG 633
PLNPKANREKMTQIMFETFNTPAMYV IQAVLSLYASGRTTG+VLDSG
Sbjct: 110 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 157
Score = 142 bits (343), Expect = 4e-34
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +2
Query: 275 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 454
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 455 PEEHPVL 475
PEEHPVL
Sbjct: 99 PEEHPVL 105
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/31 (61%), Positives = 19/31 (61%)
Frame = +3
Query: 657 PIYXGYALPHAIXXXXXXXXXXTDYXMKILT 749
PIY GYALPHAI TDY MKILT
Sbjct: 165 PIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 167 bits (405), Expect = 1e-41
Identities = 100/168 (59%), Positives = 109/168 (64%), Gaps = 10/168 (5%)
Frame = +1
Query: 160 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGTEGL 318
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 319 LCRR*GTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLLQ*AACRPRGTPSPGSLX---A 489
R G +YP H + + +D+ R P + A
Sbjct: 61 SKR--GILTLKYPI---------EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 109
Query: 490 PLNPKANREKMTQIMFETFNTPAMYVXIQAVLSLYASGRTTGIVLDSG 633
PLNPKANREKMTQIMFETFNTPAMYV IQAVLSLYASGRTTG+VLDSG
Sbjct: 110 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 157
Score = 142 bits (343), Expect = 4e-34
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +2
Query: 275 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 454
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 455 PEEHPVL 475
PEEHPVL
Sbjct: 99 PEEHPVL 105
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/31 (61%), Positives = 19/31 (61%)
Frame = +3
Query: 657 PIYXGYALPHAIXXXXXXXXXXTDYXMKILT 749
PIY GYALPHAI TDY MKILT
Sbjct: 165 PIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 167 bits (405), Expect = 1e-41
Identities = 100/168 (59%), Positives = 109/168 (64%), Gaps = 10/168 (5%)
Frame = +1
Query: 160 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGTEGL 318
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 319 LCRR*GTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLLQ*AACRPRGTPSPGSLX---A 489
R G +YP H + + +D+ R P + A
Sbjct: 61 SKR--GILTLKYPI---------EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 109
Query: 490 PLNPKANREKMTQIMFETFNTPAMYVXIQAVLSLYASGRTTGIVLDSG 633
PLNPKANREKMTQIMFETFNTPAMYV IQAVLSLYASGRTTG+VLDSG
Sbjct: 110 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 157
Score = 142 bits (343), Expect = 4e-34
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +2
Query: 275 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 454
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 455 PEEHPVL 475
PEEHPVL
Sbjct: 99 PEEHPVL 105
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/31 (61%), Positives = 19/31 (61%)
Frame = +3
Query: 657 PIYXGYALPHAIXXXXXXXXXXTDYXMKILT 749
PIY GYALPHAI TDY MKILT
Sbjct: 165 PIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 167 bits (405), Expect = 1e-41
Identities = 100/168 (59%), Positives = 109/168 (64%), Gaps = 10/168 (5%)
Frame = +1
Query: 160 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGTEGL 318
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 319 LCRR*GTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLLQ*AACRPRGTPSPGSLX---A 489
R G +YP H + + +D+ R P + A
Sbjct: 61 SKR--GILTLKYPI---------EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 109
Query: 490 PLNPKANREKMTQIMFETFNTPAMYVXIQAVLSLYASGRTTGIVLDSG 633
PLNPKANREKMTQIMFETFNTPAMYV IQAVLSLYASGRTTG+VLDSG
Sbjct: 110 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 157
Score = 142 bits (343), Expect = 4e-34
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +2
Query: 275 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 454
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 455 PEEHPVL 475
PEEHPVL
Sbjct: 99 PEEHPVL 105
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/31 (61%), Positives = 19/31 (61%)
Frame = +3
Query: 657 PIYXGYALPHAIXXXXXXXXXXTDYXMKILT 749
PIY GYALPHAI TDY MKILT
Sbjct: 165 PIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 167 bits (405), Expect = 1e-41
Identities = 100/168 (59%), Positives = 109/168 (64%), Gaps = 10/168 (5%)
Frame = +1
Query: 160 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGTEGL 318
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 319 LCRR*GTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLLQ*AACRPRGTPSPGSLX---A 489
R G +YP H + + +D+ R P + A
Sbjct: 61 SKR--GILTLKYPI---------EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 109
Query: 490 PLNPKANREKMTQIMFETFNTPAMYVXIQAVLSLYASGRTTGIVLDSG 633
PLNPKANREKMTQIMFETFNTPAMYV IQAVLSLYASGRTTG+VLDSG
Sbjct: 110 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 157
Score = 142 bits (343), Expect = 4e-34
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +2
Query: 275 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 454
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 455 PEEHPVL 475
PEEHPVL
Sbjct: 99 PEEHPVL 105
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/31 (61%), Positives = 19/31 (61%)
Frame = +3
Query: 657 PIYXGYALPHAIXXXXXXXXXXTDYXMKILT 749
PIY GYALPHAI TDY MKILT
Sbjct: 165 PIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 167 bits (405), Expect = 1e-41
Identities = 100/168 (59%), Positives = 109/168 (64%), Gaps = 10/168 (5%)
Frame = +1
Query: 160 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGTEGL 318
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 319 LCRR*GTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLLQ*AACRPRGTPSPGSLX---A 489
R G +YP H + + +D+ R P + A
Sbjct: 61 SKR--GILTLKYPI---------EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 109
Query: 490 PLNPKANREKMTQIMFETFNTPAMYVXIQAVLSLYASGRTTGIVLDSG 633
PLNPKANREKMTQIMFETFNTPAMYV IQAVLSLYASGRTTG+VLDSG
Sbjct: 110 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 157
Score = 142 bits (343), Expect = 4e-34
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +2
Query: 275 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 454
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 455 PEEHPVL 475
PEEHPVL
Sbjct: 99 PEEHPVL 105
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/31 (61%), Positives = 19/31 (61%)
Frame = +3
Query: 657 PIYXGYALPHAIXXXXXXXXXXTDYXMKILT 749
PIY GYALPHAI TDY MKILT
Sbjct: 165 PIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 166 bits (403), Expect = 2e-41
Identities = 100/168 (59%), Positives = 109/168 (64%), Gaps = 10/168 (5%)
Frame = +1
Query: 160 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGTEGL 318
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 319 LCRR*GTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLLQ*AACRPRGTPSPGSLX---A 489
R G +YP H + + +D+ R P + A
Sbjct: 61 SKR--GILTLKYPI---------EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 109
Query: 490 PLNPKANREKMTQIMFETFNTPAMYVXIQAVLSLYASGRTTGIVLDSG 633
PLNPKANREKMTQIMFETFNTPAMYV IQAVLSLYASGRTTGIVLDSG
Sbjct: 110 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 157
Score = 142 bits (343), Expect = 4e-34
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +2
Query: 275 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 454
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 455 PEEHPVL 475
PEEHPVL
Sbjct: 99 PEEHPVL 105
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/31 (61%), Positives = 19/31 (61%)
Frame = +3
Query: 657 PIYXGYALPHAIXXXXXXXXXXTDYXMKILT 749
PIY GYALPHAI TDY MKILT
Sbjct: 165 PIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 164 bits (399), Expect = 7e-41
Identities = 98/168 (58%), Positives = 109/168 (64%), Gaps = 10/168 (5%)
Frame = +1
Query: 160 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGTEGL 318
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 319 LCRR*GTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLLQ*AACRPRGTPSPGSLX---A 489
R G +YP H + + +D+ R P + A
Sbjct: 61 SKR--GILTLKYPI---------EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 109
Query: 490 PLNPKANREKMTQIMFETFNTPAMYVXIQAVLSLYASGRTTGIVLDSG 633
PLNPKANREKMTQIMFETFNTPAMYV IQAVLSLYASGRTTGIVLDSG
Sbjct: 110 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 157
Score = 142 bits (343), Expect = 4e-34
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +2
Query: 275 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 454
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 455 PEEHPVL 475
PEEHPVL
Sbjct: 99 PEEHPVL 105
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/31 (61%), Positives = 19/31 (61%)
Frame = +3
Query: 657 PIYXGYALPHAIXXXXXXXXXXTDYXMKILT 749
PIY GYALPHAI TDY MKILT
Sbjct: 165 PIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 158 bits (383), Expect = 6e-39
Identities = 96/166 (57%), Positives = 107/166 (64%), Gaps = 10/166 (6%)
Frame = +1
Query: 166 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGTEGLLC 324
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 325 RR*GTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLLQ*AACRPRGTPSPGSLX---APL 495
R G +YP H + + +D+ R P + APL
Sbjct: 62 R--GILTLKYPI---------EHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPL 110
Query: 496 NPKANREKMTQIMFETFNTPAMYVXIQAVLSLYASGRTTGIVLDSG 633
NPK+NREKMTQIMFETFNTPAMYV IQAVLSLYASGRTTGIVLD+G
Sbjct: 111 NPKSNREKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTG 156
Score = 141 bits (342), Expect = 6e-34
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +2
Query: 275 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 454
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+A
Sbjct: 38 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIA 97
Query: 455 PEEHPVL 475
PEEHPVL
Sbjct: 98 PEEHPVL 104
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/31 (61%), Positives = 19/31 (61%)
Frame = +3
Query: 657 PIYXGYALPHAIXXXXXXXXXXTDYXMKILT 749
PIY GYALPHAI TDY MKILT
Sbjct: 164 PIYEGYALPHAIQRLDLAGRDLTDYMMKILT 194
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 142 bits (343), Expect = 4e-34
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +2
Query: 275 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 454
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 25 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 84
Query: 455 PEEHPVL 475
PEEHPVL
Sbjct: 85 PEEHPVL 91
Score = 128 bits (309), Expect = 6e-30
Identities = 82/150 (54%), Positives = 91/150 (60%), Gaps = 10/150 (6%)
Frame = +1
Query: 214 KAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGTEGLLCRR*GTEQKRYPDPQIP 372
+AGFAGDDAPRAVFPSIVGRPRHQG +D G E R G +YP
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR--GILTLKYPI---- 58
Query: 373 HRTRNRH*LG*HGEDLASYLLQ*AACRPRGTPSPGSLX---APLNPKANREKMTQIMFET 543
H + + +D+ R P + APLNPKANREKMTQIMFET
Sbjct: 59 -----EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 113
Query: 544 FNTPAMYVXIQAVLSLYASGRTTGIVLDSG 633
FNTPAMYV IQAVLSLYASGRTTG+VLDSG
Sbjct: 114 FNTPAMYVAIQAVLSLYASGRTTGVVLDSG 143
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/31 (61%), Positives = 19/31 (61%)
Frame = +3
Query: 657 PIYXGYALPHAIXXXXXXXXXXTDYXMKILT 749
PIY GYALPHAI TDY MKILT
Sbjct: 151 PIYEGYALPHAILRLDLAGRDLTDYLMKILT 181
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 139 bits (336), Expect = 3e-33
Identities = 61/61 (100%), Positives = 61/61 (100%)
Frame = +2
Query: 293 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 472
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 473 L 475
L
Sbjct: 61 L 61
Score = 100 bits (239), Expect = 2e-21
Identities = 47/49 (95%), Positives = 48/49 (97%)
Frame = +1
Query: 487 APLNPKANREKMTQIMFETFNTPAMYVXIQAVLSLYASGRTTGIVLDSG 633
APLNPKANREKMTQIMFETFNTPAMYV IQAVLSLYASGRTTG+VLDSG
Sbjct: 65 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 113
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/31 (61%), Positives = 19/31 (61%)
Frame = +3
Query: 657 PIYXGYALPHAIXXXXXXXXXXTDYXMKILT 749
PIY GYALPHAI TDY MKILT
Sbjct: 121 PIYEGYALPHAILRLDLAGRDLTDYLMKILT 151
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 100 bits (240), Expect = 1e-21
Identities = 68/168 (40%), Positives = 88/168 (52%), Gaps = 6/168 (3%)
Frame = +1
Query: 184 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ-----GRDGRYGTEGLLCRR*GTEQK 348
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ G DG G
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 349 RYPDPQIPHRTRNRH*LG*HGEDLASYLLQ*AACRPRGTPSPGSLX-APLNPKANREKMT 525
YP + H N E + Y+ + P L APLNP NRE+
Sbjct: 71 EYP---MEHGIVNNWS---DMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSA 124
Query: 526 QIMFETFNTPAMYVXIQAVLSLYASGRTTGIVLDSGRXCLPHRXPSTK 669
+I FETFN PA+Y+ +QAVLSLYA+GRTTG+VLDSG + H P K
Sbjct: 125 EIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDG-VTHAVPIVK 171
Score = 81.8 bits (193), Expect = 6e-16
Identities = 34/68 (50%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Frame = +2
Query: 275 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRV 451
P VM G D ++G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++
Sbjct: 41 PKYHRVMAGGLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKI 100
Query: 452 APEEHPVL 475
PEEHPVL
Sbjct: 101 FPEEHPVL 108
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 96.7 bits (230), Expect = 2e-20
Identities = 44/48 (91%), Positives = 45/48 (93%)
Frame = +2
Query: 275 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 418
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 94.3 bits (224), Expect = 1e-19
Identities = 41/43 (95%), Positives = 43/43 (100%)
Frame = +1
Query: 160 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 288
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 96.7 bits (230), Expect = 2e-20
Identities = 44/48 (91%), Positives = 45/48 (93%)
Frame = +2
Query: 275 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 418
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 95.5 bits (227), Expect = 5e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 160 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 288
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 96.7 bits (230), Expect = 2e-20
Identities = 44/48 (91%), Positives = 45/48 (93%)
Frame = +2
Query: 275 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 418
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 95.5 bits (227), Expect = 5e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 160 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 288
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 94.3 bits (224), Expect = 1e-19
Identities = 41/43 (95%), Positives = 43/43 (100%)
Frame = +1
Query: 160 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 288
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 91.1 bits (216), Expect = 1e-18
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = +2
Query: 275 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 409
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 84.6 bits (200), Expect = 9e-17
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 5/155 (3%)
Frame = +1
Query: 184 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGRDGRYGTEGLLCRR*GTEQKRYP 357
+VVDNG+G K G+AG + P +FPS+VGRP R R G + L+ ++ ++
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 358 DPQIPHRT---RNRH*LG*HGEDLASYLLQ*AACRPRGTPSPGSLXAPLNPKANREKMTQ 528
D P RN + H D ++ + P+ + PLNP +NREKM Q
Sbjct: 69 DINYPMDNGIVRNWDDMA-HVWD-HTFGPEKLDIDPKECKLLLT-EPPLNPNSNREKMFQ 125
Query: 529 IMFETFNTPAMYVXIQAVLSLYASGRTTGIVLDSG 633
+MFE + ++YV +QAVL+LYA G TG+V+DSG
Sbjct: 126 VMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSG 160
Score = 57.6 bits (133), Expect = 1e-08
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +2
Query: 311 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVL 475
KD VG+E R +L + YP+++GIV NWDDM +W HTF E L + P+E +L
Sbjct: 53 KDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLL 108
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 60.1 bits (139), Expect = 2e-09
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +2
Query: 290 VMVGMGQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 466
V G+ D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H
Sbjct: 56 VGAGIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDH 115
Score = 52.8 bits (121), Expect = 3e-07
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 11/64 (17%)
Frame = +1
Query: 490 PLNPKANREKMTQIMFETFNTPAMYVXIQAVLSLYASGRT--------TGIVLDSG---R 636
PLN NRE +IMFE+FN P +Y+ +QAVL+L AS + TG+V+DSG
Sbjct: 123 PLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVT 182
Query: 637 XCLP 648
C+P
Sbjct: 183 HCIP 186
Score = 36.7 bits (81), Expect = 0.023
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 160 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 267
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 57.2 bits (132), Expect = 2e-08
Identities = 25/46 (54%), Positives = 33/46 (71%)
Frame = +1
Query: 496 NPKANREKMTQIMFETFNTPAMYVXIQAVLSLYASGRTTGIVLDSG 633
N +A REK+T+IMFE F PA Y+ VLS +A GRT G+++DSG
Sbjct: 134 NDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSG 179
Score = 35.9 bits (79), Expect = 0.041
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 374 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 475
++ G++ +W+ EKI H++ N L P EHPVL
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVL 127
Score = 33.5 bits (73), Expect = 0.22
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 169 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 267
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 35.1 bits (77), Expect = 0.071
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 308 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTF 433
+K +V E + +L Y PIE G V NWD ++IW TF
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 35.1 bits (77), Expect = 0.071
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 308 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTF 433
+K +V E + +L Y PIE G V NWD ++IW TF
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF 82
>U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protein
58 protein.
Length = 305
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +1
Query: 169 EEVAALVVDNGS-GMCKAGFAGDDAPRAV--FPSIVGRPRHQGRDGRYGTEG 315
++++ L D G C AG G PR P I G P G GR+GT G
Sbjct: 146 DDISVLRHDPGRCAQCPAGPMGPPGPRGPPGVPGITGAPGLDGIPGRHGTPG 197
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +2
Query: 545 STRPPCTSPSKPCSRCTRPVVPPVSCWTPGXGVSHT 652
ST P T+P P S T P VPPV+ TP S T
Sbjct: 659 STTAP-TAPVNPTSPTTAPTVPPVTTTTPTTTTSTT 693
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +2
Query: 545 STRPPCTSPSKPCSRCTRPVVPPVSCWTPGXGVSHT 652
ST P T+P P S T P VPPV+ TP S T
Sbjct: 715 STTAP-TAPVNPTSPTTAPTVPPVTTTTPTTTTSTT 749
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +2
Query: 545 STRPPCTSPSKPCSRCTRPVVPPVSCWTPGXGVSHT 652
ST P T+P P S T P VPPV+ TP S T
Sbjct: 538 STTAP-TAPVNPTSPTTAPTVPPVTTTTPTTTTSTT 572
>U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protein
111 protein.
Length = 332
Score = 30.3 bits (65), Expect = 2.0
Identities = 30/100 (30%), Positives = 38/100 (38%), Gaps = 2/100 (2%)
Frame = +1
Query: 226 AGDDAPRAVFPSIVGRPRHQGRDGRYGTEGLLCRR*GTEQKRYPDPQ-IPHRTRNRH*LG 402
AG PR P VG P QGRDG G G + R P P P + ++ G
Sbjct: 147 AGPPGPRGA-PGSVGEPGPQGRDGMGGRPGNMGR------PGPPGPAGDPGQAGSKGAPG 199
Query: 403 *HG-EDLASYLLQ*AACRPRGTPSPGSLXAPLNPKANREK 519
HG + + Q P G P P P+ P E+
Sbjct: 200 THGRQGMPGVRYQLGEPGPAGYPGPRGAPGPVGPPGVAEE 239
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +3
Query: 423 IIPSTMSCVSPPRNTQSWLTEXSP---QPQGQQREDDPDHVRNIQHARHVRXHPS 578
I+P + P+ TQ+ + +P QP Q P+ NI+ A HV PS
Sbjct: 1803 IVPVVTAAPYVPQETQAPIAPSNPEPVQPNPSQTVSIPEPTGNIEEAEHVDAKPS 1857
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,701,487
Number of Sequences: 27780
Number of extensions: 415992
Number of successful extensions: 1518
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1514
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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