Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_E19
         (914 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       25   1.3  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   2.9  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   3.9  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   3.9  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   6.8  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 13/40 (32%), Positives = 13/40 (32%), Gaps = 2/40 (5%)
 Frame = +2

Query: 785 PXPXXPPXXPPXXPXPXXP--PXXXPXPXXPPPPXPXXXP 898
           P P   P   P  P    P  P   P P  PP   P   P
Sbjct: 21  PGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60



 Score = 24.2 bits (50), Expect = 1.7
 Identities = 11/36 (30%), Positives = 11/36 (30%)
 Frame = +2

Query: 710 PXPXXXPXXPXPXPXXPXXXXPXXPPXPXXPPXXPP 817
           P P   P      P       P   P P  PP  PP
Sbjct: 21  PGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56



 Score = 23.8 bits (49), Expect = 2.2
 Identities = 12/33 (36%), Positives = 12/33 (36%), Gaps = 2/33 (6%)
 Frame = +3

Query: 813 PXPXPPXXPPPPXXPXPXXP--XPPPXXPXPXP 905
           P P P   P  P    P  P   PPP  P   P
Sbjct: 23  PQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAP 55



 Score = 22.6 bits (46), Expect = 5.1
 Identities = 11/41 (26%), Positives = 11/41 (26%)
 Frame = +3

Query: 531 PXXPXPXXPPPXXPXPXPPXXXXXPXXXXXXXPXXPPXXPP 653
           P    P   P     P  P     P       P  PP  PP
Sbjct: 16  PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56



 Score = 22.2 bits (45), Expect = 6.8
 Identities = 10/32 (31%), Positives = 10/32 (31%)
 Frame = +1

Query: 628 PXPXXXPPPPPXXXXPXXPPPXPXXPPPXXXP 723
           P P   P   P       PP     PPP   P
Sbjct: 21  PGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPP 52


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +3

Query: 636 PPXXPPPPPXPXXPXP 683
           PP   PPPP P    P
Sbjct: 338 PPKPAPPPPPPSSSGP 353



 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +3

Query: 657 PPXPXXPXPPP 689
           PP P  P PPP
Sbjct: 338 PPKPAPPPPPP 348



 Score = 21.8 bits (44), Expect = 8.9
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +3

Query: 813 PXPXPPXXPPPPXXPXP 863
           P P PP  PPPP    P
Sbjct: 339 PKPAPP--PPPPSSSGP 353


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 30/126 (23%), Positives = 30/126 (23%), Gaps = 7/126 (5%)
 Frame = +3

Query: 558 PPXXPXPXPPXXXXXPXXXXXXXPXXPPXXPPPPPXPXXPXPPPXPXPXPXPXXXXXPXX 737
           P   P P PP     P       P   P    P      P P P P P            
Sbjct: 47  PIYIPQPRPPH----PRLRREAEPKAEPGNNRPI---YIPQPRP-PHPRLRREAESEAEP 98

Query: 738 XXXXPXXXXXXXPXXPXXPXXPPXXPXPXPPXXPPPPXXPXPXXPXPPPXXP-------X 896
               P       P  P     P   P    P   P P  P P     P   P        
Sbjct: 99  GNNRPVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPVYI 158

Query: 897 PXPXPP 914
           P P PP
Sbjct: 159 PQPRPP 164


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 9/25 (36%), Positives = 9/25 (36%)
 Frame = +3

Query: 639 PXXPPPPPXPXXPXPPPXPXPXPXP 713
           P   PP   P  P P P P     P
Sbjct: 433 PILTPPSSNPVSPVPSPDPLDLAIP 457


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -2

Query: 271 YNLNFIVFANRHGFYI 224
           YN +FI++++   FYI
Sbjct: 339 YNTDFIIYSSLSSFYI 354


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 240,905
Number of Sequences: 438
Number of extensions: 16177
Number of successful extensions: 28
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29750994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)