Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_E17
         (881 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0566 - 18583624-18583710,18584445-18584567,18584682-18585044    131   8e-31
02_01_0029 - 176002-176137,176495-176646,177166-177577,178010-17...   131   8e-31

>09_04_0566 - 18583624-18583710,18584445-18584567,18584682-18585044
          Length = 190

 Score =  131 bits (316), Expect = 8e-31
 Identities = 56/94 (59%), Positives = 75/94 (79%)
 Frame = +2

Query: 245 KVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIR 424
           +V+ WFG+++ +AA+RT  SHV+N+I GVTKG++YKMR VYAHFPIN   T  N+ IEIR
Sbjct: 55  QVDAWFGTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIR 114

Query: 425 NFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGN 526
           NFLGEK +R+V M  GVT++ S K KDEL+++GN
Sbjct: 115 NFLGEKKVRKVDMLEGVTILRSEKVKDELVLDGN 148



 Score = 60.5 bits (140), Expect = 2e-09
 Identities = 25/48 (52%), Positives = 40/48 (83%)
 Frame = +1

Query: 85  MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV 228
           MK I+A++ ++IP+G+TV V +++VTV+GPRG L RNFKHL +D +++
Sbjct: 1   MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLL 48



 Score = 54.0 bits (124), Expect = 2e-07
 Identities = 26/37 (70%), Positives = 29/37 (78%)
 Frame = +3

Query: 540 VSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVVLD 650
           VS SAALI Q   VKNKDIRKFLDG+YVS+K T+  D
Sbjct: 153 VSRSAALINQKCHVKNKDIRKFLDGIYVSDKGTITED 189


>02_01_0029 -
           176002-176137,176495-176646,177166-177577,178010-178126,
           178260-178322,178964-179167,180605-180687,182394-182516,
           182987-183328
          Length = 543

 Score =  131 bits (316), Expect = 8e-31
 Identities = 56/94 (59%), Positives = 75/94 (79%)
 Frame = +2

Query: 245 KVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIR 424
           +V+ WFG+++ +AA+RT  SHV+N+I GVTKG++YKMR VYAHFPIN   T  N+ IEIR
Sbjct: 48  QVDAWFGTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIR 107

Query: 425 NFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGN 526
           NFLGEK +R+V M  GVT++ S K KDEL+++GN
Sbjct: 108 NFLGEKKVRKVDMLEGVTILRSEKVKDELVLDGN 141



 Score = 54.8 bits (126), Expect = 9e-08
 Identities = 22/39 (56%), Positives = 33/39 (84%)
 Frame = +1

Query: 112 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV 228
           ++IP G+TVHV +++VTV+GPRG L RNFKHL +D +++
Sbjct: 1   MEIPSGVTVHVAAKVVTVEGPRGKLTRNFKHLNLDFQLL 39



 Score = 54.0 bits (124), Expect = 2e-07
 Identities = 26/37 (70%), Positives = 29/37 (78%)
 Frame = +3

Query: 540 VSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVVLD 650
           VS SAALI Q   VKNKDIRKFLDG+YVS+K T+  D
Sbjct: 146 VSRSAALINQKCHVKNKDIRKFLDGIYVSDKGTITED 182


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,345,911
Number of Sequences: 37544
Number of extensions: 345054
Number of successful extensions: 724
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 724
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)