Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_E16
(897 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1136 + 24218601-24218734,24218769-24219906 34 0.18
02_05_0686 - 30900748-30902167,30903442-30904742 33 0.31
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 33 0.41
11_06_0610 - 25449085-25453284 32 0.71
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 3.8
04_04_0233 + 23801944-23802598,23802914-23803047,23803548-238037... 29 3.8
07_01_0479 + 3606663-3607448 29 5.0
12_01_0239 - 1793612-1793716,1793808-1793826,1794424-1794599,179... 28 8.8
11_01_0242 - 1862106-1862210,1862302-1862320,1863082-1863257,186... 28 8.8
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 33.9 bits (74), Expect = 0.18
Identities = 24/82 (29%), Positives = 25/82 (30%)
Frame = -1
Query: 780 GGGGGXGKXPXPXXXGXXGXXGAPGXXXFXGXSPXXGGXXXFXXXXXXXXXXXPXXXGXG 601
GGGGG G P G G G P G P G G G
Sbjct: 149 GGGGGGGALARPPGGGRGGALGRPPGGGGGGGGP--GRAPGGGGGGGGPGRAPGGGGGGG 206
Query: 600 XFXGGXGXGPXKKXPXXXGGGG 535
GG G G + GGGG
Sbjct: 207 GLGGGGGEGGAPERVIGGGGGG 228
Score = 29.9 bits (64), Expect = 2.9
Identities = 36/128 (28%), Positives = 37/128 (28%), Gaps = 7/128 (5%)
Frame = -2
Query: 884 GXAXGXFXGGG-RXXXXXPGGGPPXXXXXXXXXXXXXXXXVXGXPPXXXPXGGG----XX 720
G A G GGG R GGGPP PP GGG
Sbjct: 95 GGAPGPLGGGGARPPGGGGGGGPP-------SLPPGAGGGGGARPPAPGGGGGGGAPRRV 147
Query: 719 XGXRGXXXFXGXPP--XXGGEXXSPPXGGEXXXXXXXXXXXGFFXGGXGXGPKKKXPXPX 546
G G PP GG PP GG GG G GP +
Sbjct: 148 LGGGGGGGALARPPGGGRGGALGRPPGGGGGGGGPGRAPG----GGGGGGGPGRAPGGGG 203
Query: 545 GGGXFFXG 522
GGG G
Sbjct: 204 GGGGLGGG 211
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 33.1 bits (72), Expect = 0.31
Identities = 22/72 (30%), Positives = 22/72 (30%), Gaps = 1/72 (1%)
Frame = +2
Query: 536 PPPPXXXGXFFXGPXPXPPKKXPXPXXXXXXXXXXXXXXXXXXXPPKXGEXPXKXXXPGA 715
PPPP P P PPK P P PPK G P PG
Sbjct: 314 PPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPK-GPSPPPPPPPGG 372
Query: 716 PK-XPXXPKXXG 748
K P P G
Sbjct: 373 KKGGPPPPPPKG 384
Score = 29.9 bits (64), Expect = 2.9
Identities = 22/76 (28%), Positives = 24/76 (31%), Gaps = 1/76 (1%)
Frame = +1
Query: 538 PPPXGXGXFFXGPXPXPPXKXPXPPXXXXXXXXXXXXXXEXXSPPXXGGXPXKXXXPRXP 717
PPP P P PP K PP + PP P P+ P
Sbjct: 314 PPPPPPKPAAAAPPPPPPPKAAPPPPPP-----------KGPPPPPPAKGPPPPPPPKGP 362
Query: 718 XXXPPPX-GXXXGGFP 762
PPP G GG P
Sbjct: 363 SPPPPPPPGGKKGGPP 378
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/63 (26%), Positives = 17/63 (26%)
Frame = +1
Query: 574 PXPXPPXKXPXPPXXXXXXXXXXXXXXEXXSPPXXGGXPXKXXXPRXPXXXPPPXGXXXG 753
P P P P PP PP G P P PPP G G
Sbjct: 317 PPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGG 376
Query: 754 GFP 762
P
Sbjct: 377 PPP 379
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 32.7 bits (71), Expect = 0.41
Identities = 19/71 (26%), Positives = 20/71 (28%)
Frame = +1
Query: 523 PXKKXPPPXGXGXFFXGPXPXPPXKXPXPPXXXXXXXXXXXXXXEXXSPPXXGGXPXKXX 702
P PPP F GP P + P PP S P P
Sbjct: 57 PPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSP 116
Query: 703 XPRXPXXXPPP 735
P P PPP
Sbjct: 117 PPSAPPPPPPP 127
Score = 31.5 bits (68), Expect = 0.94
Identities = 30/116 (25%), Positives = 33/116 (28%)
Frame = +1
Query: 538 PPPXGXGXFFXGPXPXPPXKXPXPPXXXXXXXXXXXXXXEXXSPPXXGGXPXKXXXPRXP 717
PPP G F P P PP P PP + PP P P P
Sbjct: 42 PPPQGAPPPFLAPPPPPP---PGPPPPHQPQFNFGPGPPQQQQPPP---PPQMYYQPPPP 95
Query: 718 XXXPPPXGXXXGGFPXXXXXXXXXXXXXXXXXXGGPPPGXXXXXRPPPXKXPXAXP 885
PPP G P PPP +PPP + A P
Sbjct: 96 ---PPPYGVNSSQPP-------PPPPPPPSPPPSAPPPPPPPPTQPPPREAQLAPP 141
Score = 30.7 bits (66), Expect = 1.6
Identities = 27/113 (23%), Positives = 28/113 (24%), Gaps = 5/113 (4%)
Frame = +1
Query: 574 PXPXPPXKX--PXPPXXXXXXXXXXXXXXEXXSPPXXGGXPXKXXXPRXPXXXPPPXGXX 747
P P PP P PP PP G P P P PPP
Sbjct: 9 PHPPPPQGGFPPQPPPMNPYGPPPPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPPHQP 68
Query: 748 XGGFPXXXXXXXXXXXXXXXXXXGGPPP---GXXXXXRPPPXKXPXAXPFXXP 897
F PPP G PPP P + P P
Sbjct: 69 QFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAP 121
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 31.9 bits (69), Expect = 0.71
Identities = 30/117 (25%), Positives = 31/117 (26%)
Frame = +1
Query: 523 PXKKXPPPXGXGXFFXGPXPXPPXKXPXPPXXXXXXXXXXXXXXEXXSPPXXGGXPXKXX 702
P +K PPP P PP K P PP SPP P
Sbjct: 1147 PPEKSPPPPAPVIL-----PPPPIKSPPPPAPVISPPPPVK------SPPP----PAPVI 1191
Query: 703 XPRXPXXXPPPXGXXXGGFPXXXXXXXXXXXXXXXXXXGGPPPGXXXXXRPPPXKXP 873
P P PPP P PPP PPP K P
Sbjct: 1192 LPPPPVKSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKSPPPPAPVISPPPPEKSP 1248
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.5 bits (63), Expect = 3.8
Identities = 30/127 (23%), Positives = 30/127 (23%), Gaps = 2/127 (1%)
Frame = +1
Query: 523 PXKKXPPPXGXGXFFXGPXPXPPXKXPXPPXXXXXXXXXXXXXXEXXSPPXXGGXPXKXX 702
P PPP G F P P PP P PP PP
Sbjct: 547 PPPPPPPPSGNKPAFSPPPPPPP---PPPPPLPQSNYASSQPPPPPPPPPL-----PNCL 598
Query: 703 XPRXPXXXPPPXGXXXGGFPXXXXXXXXXXXXXXXXXXGGPPPGXXXXXR--PPPXKXPX 876
P P PPP P PPP R PPP
Sbjct: 599 VPSPPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPPSLPNRLVPPPPAPGI 658
Query: 877 AXPFXXP 897
F P
Sbjct: 659 GNKFPAP 665
Score = 29.1 bits (62), Expect = 5.0
Identities = 20/73 (27%), Positives = 23/73 (31%), Gaps = 2/73 (2%)
Frame = +1
Query: 523 PXKKXPPPXGXGXFFXGPXPXPPXKXPXPPXXXXXXXXXXXXXXEXXSPPXXGGXP--XK 696
P + PPP G P P PP P PP + PP P +
Sbjct: 646 PNRLVPPPPAPGIGNKFPAPPPP---PPPPRSSSRTPTGAATSSKGPPPPPPPPLPPANR 702
Query: 697 XXXPRXPXXXPPP 735
P P PPP
Sbjct: 703 TNGPGVPSAPPPP 715
>04_04_0233 +
23801944-23802598,23802914-23803047,23803548-23803730,
23804145-23804318
Length = 381
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 523 PXKKXPPPXGXGXFFXGPXPXPPXKXPXPP 612
P PPP GP P PP P PP
Sbjct: 10 PPTPSPPPFSSRPRVVGPPPPPPSDPPPPP 39
>07_01_0479 + 3606663-3607448
Length = 261
Score = 29.1 bits (62), Expect = 5.0
Identities = 19/64 (29%), Positives = 20/64 (31%)
Frame = +1
Query: 706 PRXPXXXPPPXGXXXGGFPXXXXXXXXXXXXXXXXXXGGPPPGXXXXXRPPPXKXPXAXP 885
P P PPP G G P GGPPPG PPP + P
Sbjct: 195 PAFPGGPPPPPGPFMRGPPPMGPPQVRPGMP------GGPPPGMRPGMPPPPFRPGMPPP 248
Query: 886 FXXP 897
P
Sbjct: 249 PPGP 252
>12_01_0239 -
1793612-1793716,1793808-1793826,1794424-1794599,
1794701-1794747,1795760-1796291
Length = 292
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 780 GGGGGXGKXPXPXXXGXXGXXGAP 709
GGGGG G P G G GAP
Sbjct: 57 GGGGGYGAPPSTQPYGSGGGYGAP 80
>11_01_0242 -
1862106-1862210,1862302-1862320,1863082-1863257,
1863359-1863405,1864443-1865022
Length = 308
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 780 GGGGGXGKXPXPXXXGXXGXXGAP 709
GGGGG G P G G GAP
Sbjct: 57 GGGGGYGAPPSTQPYGSGGGYGAP 80
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,775,316
Number of Sequences: 37544
Number of extensions: 320118
Number of successful extensions: 1876
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1606
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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