Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_E16
(897 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.091
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.091
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.091
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.21
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.21
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 32 0.64
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.1
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.5
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 31 1.5
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 31 1.5
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 31 1.5
AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical ... 30 2.0
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.6
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 4.5
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 4.5
Z68106-4|CAA92128.1| 112|Caenorhabditis elegans Hypothetical pr... 29 6.0
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 29 6.0
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 6.0
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 28 7.9
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 28 7.9
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 28 7.9
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.7 bits (76), Expect = 0.091
Identities = 25/77 (32%), Positives = 25/77 (32%), Gaps = 2/77 (2%)
Frame = +1
Query: 538 PPPXGXGXFFXGPXPXPPXKXPXPPXXXXXXXXXXXXXXEXXSPPXXGGXPXKXXXPRX- 714
PPP G GP P PP PP PP GG P P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGG-LPPITGGPPPPPPPGGL----PPISGGPPPPPPPPGGC 768
Query: 715 -PXXXPPPXGXXXGGFP 762
P PPP G GG P
Sbjct: 769 PPPPPPPPPGGFKGGPP 785
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 536 PPPPXXXGXFFXGPXPXPP 592
PPPP G F GP P PP
Sbjct: 771 PPPPPPPGGFKGGPPPPPP 789
Score = 28.7 bits (61), Expect = 6.0
Identities = 21/76 (27%), Positives = 21/76 (27%), Gaps = 2/76 (2%)
Frame = +1
Query: 667 PPXXGGXPXKXXXPRXPXXXPPPXGXXXGGFPXXXXXXXXXXXXXXXXXXGG--PPPGXX 840
PP GG P P PPP GG P G PPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPP--PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Query: 841 XXXRPPPXKXPXAXPF 888
PPP P F
Sbjct: 765 PGGCPPPPPPPPPGGF 780
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.7 bits (76), Expect = 0.091
Identities = 25/77 (32%), Positives = 25/77 (32%), Gaps = 2/77 (2%)
Frame = +1
Query: 538 PPPXGXGXFFXGPXPXPPXKXPXPPXXXXXXXXXXXXXXEXXSPPXXGGXPXKXXXPRX- 714
PPP G GP P PP PP PP GG P P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGG-LPPITGGPPPPPPPGGL----PPISGGPPPPPPPPGGC 768
Query: 715 -PXXXPPPXGXXXGGFP 762
P PPP G GG P
Sbjct: 769 PPPPPPPPPGGFKGGPP 785
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 536 PPPPXXXGXFFXGPXPXPP 592
PPPP G F GP P PP
Sbjct: 771 PPPPPPPGGFKGGPPPPPP 789
Score = 28.7 bits (61), Expect = 6.0
Identities = 21/76 (27%), Positives = 21/76 (27%), Gaps = 2/76 (2%)
Frame = +1
Query: 667 PPXXGGXPXKXXXPRXPXXXPPPXGXXXGGFPXXXXXXXXXXXXXXXXXXGG--PPPGXX 840
PP GG P P PPP GG P G PPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPP--PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Query: 841 XXXRPPPXKXPXAXPF 888
PPP P F
Sbjct: 765 PGGCPPPPPPPPPGGF 780
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.7 bits (76), Expect = 0.091
Identities = 25/77 (32%), Positives = 25/77 (32%), Gaps = 2/77 (2%)
Frame = +1
Query: 538 PPPXGXGXFFXGPXPXPPXKXPXPPXXXXXXXXXXXXXXEXXSPPXXGGXPXKXXXPRX- 714
PPP G GP P PP PP PP GG P P
Sbjct: 297 PPPPGLPPITGGPPPPPPPGG-LPPITGGPPPPPPPGGL----PPISGGPPPPPPPPGGC 351
Query: 715 -PXXXPPPXGXXXGGFP 762
P PPP G GG P
Sbjct: 352 PPPPPPPPPGGFKGGPP 368
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 536 PPPPXXXGXFFXGPXPXPP 592
PPPP G F GP P PP
Sbjct: 354 PPPPPPPGGFKGGPPPPPP 372
Score = 28.7 bits (61), Expect = 6.0
Identities = 21/76 (27%), Positives = 21/76 (27%), Gaps = 2/76 (2%)
Frame = +1
Query: 667 PPXXGGXPXKXXXPRXPXXXPPPXGXXXGGFPXXXXXXXXXXXXXXXXXXGG--PPPGXX 840
PP GG P P PPP GG P G PPP
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPP--PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 347
Query: 841 XXXRPPPXKXPXAXPF 888
PPP P F
Sbjct: 348 PGGCPPPPPPPPPGGF 363
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.5 bits (73), Expect = 0.21
Identities = 20/67 (29%), Positives = 22/67 (32%), Gaps = 1/67 (1%)
Frame = +1
Query: 538 PPPXGXGXFFXGPXPXPPXKXPXPPXXXXXXXXXXXXXXEXXSPPXXGG-XPXKXXXPRX 714
PPP + P P PP + P PP PP GG P R
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPP---GMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRY 343
Query: 715 PXXXPPP 735
P PPP
Sbjct: 344 PGGMPPP 350
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.5 bits (73), Expect = 0.21
Identities = 20/67 (29%), Positives = 22/67 (32%), Gaps = 1/67 (1%)
Frame = +1
Query: 538 PPPXGXGXFFXGPXPXPPXKXPXPPXXXXXXXXXXXXXXEXXSPPXXGG-XPXKXXXPRX 714
PPP + P P PP + P PP PP GG P R
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPP---GMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRY 353
Query: 715 PXXXPPP 735
P PPP
Sbjct: 354 PGGMPPP 360
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 31.9 bits (69), Expect = 0.64
Identities = 24/85 (28%), Positives = 25/85 (29%), Gaps = 2/85 (2%)
Frame = -1
Query: 780 GGGGGXGKXPXPXXXGXXGXXGAPGXXXFXGXSPXXGGXXXFXXXXXXXXXXXPXXXG-- 607
GGG G G G G G PG G GG F G
Sbjct: 121 GGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGGGGD 180
Query: 606 XGXFXGGXGXGPXKKXPXXXGGGGF 532
G GG G G GGGG+
Sbjct: 181 GGYGGGGFGGGGMGGYGGGMGGGGY 205
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.1 bits (67), Expect = 1.1
Identities = 27/116 (23%), Positives = 28/116 (24%)
Frame = +1
Query: 538 PPPXGXGXFFXGPXPXPPXKXPXPPXXXXXXXXXXXXXXEXXSPPXXGGXPXKXXXPRXP 717
PPP G P PP PP PP GG P P
Sbjct: 241 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP--PPPAGGSP-----PPPR 293
Query: 718 XXXPPPXGXXXGGFPXXXXXXXXXXXXXXXXXXGGPPPGXXXXXRPPPXKXPXAXP 885
PPP G P G PPP + P P P
Sbjct: 294 AGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSP 349
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.1 bits (67), Expect = 1.1
Identities = 27/116 (23%), Positives = 28/116 (24%)
Frame = +1
Query: 538 PPPXGXGXFFXGPXPXPPXKXPXPPXXXXXXXXXXXXXXEXXSPPXXGGXPXKXXXPRXP 717
PPP G P PP PP PP GG P P
Sbjct: 262 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP--PPPAGGSP-----PPPR 314
Query: 718 XXXPPPXGXXXGGFPXXXXXXXXXXXXXXXXXXGGPPPGXXXXXRPPPXKXPXAXP 885
PPP G P G PPP + P P P
Sbjct: 315 AGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSP 370
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.1 bits (67), Expect = 1.1
Identities = 27/116 (23%), Positives = 28/116 (24%)
Frame = +1
Query: 538 PPPXGXGXFFXGPXPXPPXKXPXPPXXXXXXXXXXXXXXEXXSPPXXGGXPXKXXXPRXP 717
PPP G P PP PP PP GG P P
Sbjct: 247 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP--PPPAGGSP-----PPPR 299
Query: 718 XXXPPPXGXXXGGFPXXXXXXXXXXXXXXXXXXGGPPPGXXXXXRPPPXKXPXAXP 885
PPP G P G PPP + P P P
Sbjct: 300 AGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSP 355
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.7 bits (66), Expect = 1.5
Identities = 24/87 (27%), Positives = 24/87 (27%)
Frame = -1
Query: 795 FLFXXGGGGGXGKXPXPXXXGXXGXXGAPGXXXFXGXSPXXGGXXXFXXXXXXXXXXXPX 616
FLF GGGGG G G G G G P
Sbjct: 18 FLFPSGGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGG 77
Query: 615 XXGXGXFXGGXGXGPXKKXPXXXGGGG 535
G G GG G G GGGG
Sbjct: 78 GCGGGGGCGGGGGGCGGGGGGCGGGGG 104
Score = 28.3 bits (60), Expect = 7.9
Identities = 22/82 (26%), Positives = 22/82 (26%)
Frame = -1
Query: 780 GGGGGXGKXPXPXXXGXXGXXGAPGXXXFXGXSPXXGGXXXFXXXXXXXXXXXPXXXGXG 601
GGG G G P P G G G G GG G G
Sbjct: 102 GGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGG 161
Query: 600 XFXGGXGXGPXKKXPXXXGGGG 535
GG G GGGG
Sbjct: 162 GCGGGGGGCGGGGGGGCGGGGG 183
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 780 GGGGGXGKXPXPXXXGXXGXXGAPGXXXFXGXSPXXGG 667
GGGGG G P G G G PG G GG
Sbjct: 221 GGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGG 258
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 780 GGGGGXGKXPXPXXXGXXGXXGAPGXXXFXGXSPXXGG 667
GGGGG G P G G G PG G GG
Sbjct: 183 GGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGG 220
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 780 GGGGGXGKXPXPXXXGXXGXXGAPGXXXFXGXSPXXGG 667
GGGGG G P G G G PG G GG
Sbjct: 221 GGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGG 258
>AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical
protein C02E7.6 protein.
Length = 70
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -1
Query: 795 FLFXXGGGGGXGKXPXPXXXGXXGXXGAP 709
FLF GGGGG G P P G AP
Sbjct: 17 FLFPSGGGGGCGCAPPPPPACGCGGGAAP 45
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.6
Identities = 22/81 (27%), Positives = 22/81 (27%)
Frame = -1
Query: 780 GGGGGXGKXPXPXXXGXXGXXGAPGXXXFXGXSPXXGGXXXFXXXXXXXXXXXPXXXGXG 601
GGGGG P P G G G G P G G G
Sbjct: 43 GGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGG 102
Query: 600 XFXGGXGXGPXKKXPXXXGGG 538
GG G G GGG
Sbjct: 103 CGGGGGGCGGGGGGCGGGGGG 123
Score = 28.3 bits (60), Expect = 7.9
Identities = 22/82 (26%), Positives = 23/82 (28%)
Frame = -1
Query: 780 GGGGGXGKXPXPXXXGXXGXXGAPGXXXFXGXSPXXGGXXXFXXXXXXXXXXXPXXXGXG 601
G GGG G P P G G G G +P G G
Sbjct: 41 GCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGG 100
Query: 600 XFXGGXGXGPXKKXPXXXGGGG 535
GG G G GGGG
Sbjct: 101 GGCGGGGGGCGGGGGGCGGGGG 122
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.6
Identities = 22/81 (27%), Positives = 22/81 (27%)
Frame = -1
Query: 780 GGGGGXGKXPXPXXXGXXGXXGAPGXXXFXGXSPXXGGXXXFXXXXXXXXXXXPXXXGXG 601
GGGGG P P G G G G P G G G
Sbjct: 43 GGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGG 102
Query: 600 XFXGGXGXGPXKKXPXXXGGG 538
GG G G GGG
Sbjct: 103 CGGGGGGCGGGGGGCGGGGGG 123
Score = 28.3 bits (60), Expect = 7.9
Identities = 22/82 (26%), Positives = 23/82 (28%)
Frame = -1
Query: 780 GGGGGXGKXPXPXXXGXXGXXGAPGXXXFXGXSPXXGGXXXFXXXXXXXXXXXPXXXGXG 601
G GGG G P P G G G G +P G G
Sbjct: 41 GCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGG 100
Query: 600 XFXGGXGXGPXKKXPXXXGGGG 535
GG G G GGGG
Sbjct: 101 GGCGGGGGGCGGGGGGCGGGGG 122
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.1 bits (62), Expect = 4.5
Identities = 22/75 (29%), Positives = 23/75 (30%)
Frame = -2
Query: 860 GGGRXXXXXPGGGPPXXXXXXXXXXXXXXXXVXGXPPXXXPXGGGXXXGXRGXXXFXGXP 681
GG GGPP G PP GGG G G G P
Sbjct: 120 GGSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMG--GGGDPRGPPGGM---GGP 174
Query: 680 PXXGGEXXSPPXGGE 636
P GG P GG+
Sbjct: 175 PGHGGMGGPPGHGGQ 189
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.1 bits (62), Expect = 4.5
Identities = 22/75 (29%), Positives = 23/75 (30%)
Frame = -2
Query: 860 GGGRXXXXXPGGGPPXXXXXXXXXXXXXXXXVXGXPPXXXPXGGGXXXGXRGXXXFXGXP 681
GG GGPP G PP GGG G G G P
Sbjct: 400 GGSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMG--GGGDPRGPPGGM---GGP 454
Query: 680 PXXGGEXXSPPXGGE 636
P GG P GG+
Sbjct: 455 PGHGGMGGPPGHGGQ 469
>Z68106-4|CAA92128.1| 112|Caenorhabditis elegans Hypothetical
protein F41E7.5 protein.
Length = 112
Score = 28.7 bits (61), Expect = 6.0
Identities = 24/69 (34%), Positives = 24/69 (34%)
Frame = -1
Query: 780 GGGGGXGKXPXPXXXGXXGXXGAPGXXXFXGXSPXXGGXXXFXXXXXXXXXXXPXXXGXG 601
GGGGG G P G G G PG G GG F P G G
Sbjct: 32 GGGGGFGGGPGQFGRG--GFGGGPGSNYGPGRG-GFGGNGGF--GGNGGFGGGPSYGGRG 86
Query: 600 XFXGGXGXG 574
F GG G G
Sbjct: 87 GFGGGPGFG 95
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 795 FLFXXGGGGGXGKXPXPXXXGXXGXXGAPG 706
FL GGGGG G P P G G G
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPSPCGCGGGGG 46
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.7 bits (61), Expect = 6.0
Identities = 22/81 (27%), Positives = 23/81 (28%)
Frame = -1
Query: 777 GGGGXGKXPXPXXXGXXGXXGAPGXXXFXGXSPXXGGXXXFXXXXXXXXXXXPXXXGXGX 598
G GG + P G G G PG G GG G G
Sbjct: 267 GSGGAAQPGPPGPPGPPGNDGQPGGPGQPGGPGQDGGPGTDAAYCPCPPRTPAGGGGGGD 326
Query: 597 FXGGXGXGPXKKXPXXXGGGG 535
F G G G GGGG
Sbjct: 327 FPAGGGGGGYS----TGGGGG 343
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 780 GGGGGXGKXPXPXXXGXXGXXGAPG 706
GGGGG G P G G G PG
Sbjct: 183 GGGGGGGGWGGPAQRGGPGAYGGPG 207
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 780 GGGGGXGKXPXPXXXGXXGXXGAPG 706
GGGGG G P G G G PG
Sbjct: 221 GGGGGGGGWGGPAQRGGPGAYGGPG 245
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = -1
Query: 780 GGGGGXGKXPXPXXXGXXGXXGAPGXXXFXGXSPXXGG 667
GG G G+ P G G G PG G S GG
Sbjct: 233 GGSGTPGQPGAPGAPGHPGQAGTPGTPGAPGNSGAPGG 270
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,035,361
Number of Sequences: 27780
Number of extensions: 202902
Number of successful extensions: 1083
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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