Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_E11
         (874 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0510 - 16659486-16659564,16659772-16659947,16660464-166607...   121   7e-28
02_03_0270 + 17135464-17135467,17135583-17135655,17136253-171365...   106   3e-23
01_02_0013 + 10162478-10163581                                         29   3.7  
08_01_0892 - 8778097-8778236,8778390-8778486,8778568-8778747,877...    28   8.5  

>04_03_0510 -
           16659486-16659564,16659772-16659947,16660464-16660797,
           16661564-16661636,16661780-16661783
          Length = 221

 Score =  121 bits (292), Expect = 7e-28
 Identities = 60/119 (50%), Positives = 78/119 (65%), Gaps = 8/119 (6%)
 Frame = +1

Query: 367 LXKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLT--------EAEEAIINKKRSQKTAR 522
           L K+AIV VDA PF+QWY +HY + +GRKK A           E E A    K+S    R
Sbjct: 97  LVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKAPAAKKDAAEGQEGEAATEEAKKSNHVVR 156

Query: 523 KYLARQRLAKVEGALEEXFHTGRLLACVASRPGQCGRADGYXLXGKELEFYLRKIKSKR 699
           K   RQ+   ++  +EE F +GRLLAC++SRPGQCGRADGY L GKELEFY++K++ K+
Sbjct: 157 KLEKRQQTRTLDSHIEEQFGSGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKK 215



 Score = 92.3 bits (219), Expect = 5e-19
 Identities = 42/50 (84%), Positives = 46/50 (92%)
 Frame = +3

Query: 219 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTL 368
           R RGGN K+RALRLDTGN+SWGSE  TRKTRI+DVVYNASNNELVRT+TL
Sbjct: 48  RVRGGNLKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTL 97



 Score = 62.5 bits (145), Expect = 4e-10
 Identities = 29/42 (69%), Positives = 32/42 (76%)
 Frame = +2

Query: 80  MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQR 205
           MGISRD  HKRRATGGK+   RKKRKYELGR  ANT+L   +
Sbjct: 1   MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNK 42


>02_03_0270 +
           17135464-17135467,17135583-17135655,17136253-17136583,
           17136916-17136969,17137219-17137394,17137607-17137685
          Length = 238

 Score =  106 bits (254), Expect = 3e-23
 Identities = 60/136 (44%), Positives = 79/136 (58%), Gaps = 25/136 (18%)
 Frame = +1

Query: 367 LXKNAIVVVDATPFRQWYESHYTLPLGRKKGA-------------------------KLT 471
           L K+AIV VDA PF+QWY +HY + +GRKK A                         K  
Sbjct: 97  LVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKAPAAKKDAEHALGKIRCLFIGLYVMLKGQ 156

Query: 472 EAEEAIINKKRSQKTARKYLARQRLAKVEGALEEXFHTGRLLACVASRPGQCGRADGYXL 651
           +AE      K+S    RK   RQ+   ++  +EE F +GRLLAC++SRPGQCGRADGY L
Sbjct: 157 DAEATTEEAKKSNHVVRKLEKRQQGRTLDAHIEEQFGSGRLLACISSRPGQCGRADGYIL 216

Query: 652 XGKELEFYLRKIKSKR 699
            GKELEFY++K++ K+
Sbjct: 217 EGKELEFYMKKLQRKK 232



 Score = 92.7 bits (220), Expect = 3e-19
 Identities = 42/50 (84%), Positives = 46/50 (92%)
 Frame = +3

Query: 219 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTL 368
           R RGGN K+RALRLDTGN+SWGSE  TRKTRI+DVVYNASNNELVRT+TL
Sbjct: 48  RVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTL 97



 Score = 62.5 bits (145), Expect = 4e-10
 Identities = 29/42 (69%), Positives = 32/42 (76%)
 Frame = +2

Query: 80  MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQR 205
           MGISRD  HKRRATGGK+   RKKRKYELGR  ANT+L   +
Sbjct: 1   MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNK 42


>01_02_0013 + 10162478-10163581
          Length = 367

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +1

Query: 232 EILSTVRCVWTPVTSLGDRNVQLAKPVSLMLCIMHLTMNWCVQRPL 369
           E +S  RC   P+   G R  + A   SL + ++HL   +C  RPL
Sbjct: 240 EYMSPERCA--PMAMAGARVARAADVWSLGITVLHLYQGYCPARPL 283


>08_01_0892 -
           8778097-8778236,8778390-8778486,8778568-8778747,
           8779138-8779247,8781153-8781294,8782298-8782686,
           8782752-8782834,8783524-8785244,8785894-8786040,
           8786121-8786264,8786669-8786741,8787413-8787633
          Length = 1148

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +3

Query: 273 FSWGSECSTRKTRIIDVVYNASNNELVRTKTLXQE 377
           F W   C+T   ++  V  + S +EL+ T  + Q+
Sbjct: 728 FQWSGRCTTEDFKLNQVCIDGSRDELLETDVIRQD 762


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,506,173
Number of Sequences: 37544
Number of extensions: 410485
Number of successful extensions: 1045
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1044
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)