Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_E09
         (888 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0118 - 898490-899104                                             30   2.1  
07_03_0565 - 19561078-19561425,19562253-19563746                       30   2.8  
07_01_0362 - 2667031-2667090,2667182-2667426,2667749-2669471,266...    29   3.7  
06_01_0487 - 3459853-3459917,3460058-3460408,3460991-3461114,346...    29   4.9  
09_06_0347 + 22445962-22446154,22446495-22446616,22446764-224468...    29   6.5  

>12_01_0118 - 898490-899104
          Length = 204

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
 Frame = +3

Query: 354 GAVKSKFARWYPGQWSCCR---GIRGRLVRPQGVAASAATG 467
           G V  +  +W+ G+W   R   G+R R+ R  G AA +ATG
Sbjct: 99  GGVWRRRIQWWGGRWRWIRRWGGLRRRIQRWGGAAADSATG 139


>07_03_0565 - 19561078-19561425,19562253-19563746
          Length = 613

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = -3

Query: 466 PVAADAATP*GRTSLPLIPLQHDHCPGYHRANLLLTAPMASTLN 335
           PV A AA P   +S P+ P  + H P +HR  L   A +A  L+
Sbjct: 9   PVPA-AARPKRTSSAPIRPSDYTHSPAHHRVALRDAAGLAGVLH 51


>07_01_0362 -
           2667031-2667090,2667182-2667426,2667749-2669471,
           2669578-2669921,2670544-2670667,2671350-2671599,
           2672486-2672571
          Length = 943

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +1

Query: 430 YDLKELPRPPQLDLSNDVIDGTRQGVLSVQNIDFCTDING-EHHHTSRYNLMTRDE 594
           +D + +PRP  L ++N      R+GVL+ + I   + ING     T R N+  R E
Sbjct: 359 WDFRSVPRPSHLSINNIDAPDMRKGVLT-RGISATSGINGWVAEGTERENVEGRGE 413


>06_01_0487 -
           3459853-3459917,3460058-3460408,3460991-3461114,
           3461226-3461359,3462277-3462412,3462486-3462834,
           3463994-3464000,3464058-3464226
          Length = 444

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = +3

Query: 390 GQWSC-CRGIRGRLVRPQGVAASAATGSLER 479
           G W+   RG+RG   RP GVAA AA+G+ E+
Sbjct: 12  GCWAAVARGLRGACFRPAGVAA-AASGADEK 41


>09_06_0347 +
           22445962-22446154,22446495-22446616,22446764-22446885,
           22447405-22447594,22447874-22448014,22448257-22448724,
           22448842-22449609,22450185-22450373
          Length = 730

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 11/38 (28%), Positives = 23/38 (60%)
 Frame = -1

Query: 711 LNIRHIEDE*NSVFIWIICPIEQQIKREGLSSTDN*TF 598
           L+ + + ++  +V  + ICPI+Q + R+ L + D  T+
Sbjct: 646 LSFKSVSEDFGNVPSYFICPIQQDVMRDPLIAADGFTY 683


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,809,102
Number of Sequences: 37544
Number of extensions: 475686
Number of successful extensions: 1151
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1149
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)