Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_E09
         (888 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          26   0.40 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      26   0.40 
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          24   2.1  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    23   3.7  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    23   4.9  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   4.9  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    22   8.6  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    22   8.6  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 26.2 bits (55), Expect = 0.40
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -1

Query: 594 FVPGHQIVSAGVVVFSIDVGAE 529
           F+P HQ+   G++ FS+ VGAE
Sbjct: 2   FIPSHQVWLVGLLAFSL-VGAE 22


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 26.2 bits (55), Expect = 0.40
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -1

Query: 594 FVPGHQIVSAGVVVFSIDVGAE 529
           F+P HQ+   G++ FS+ VGAE
Sbjct: 2   FIPSHQVWLVGLLAFSL-VGAE 22


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -3

Query: 850 QRPAVTXHHEMRVHXDCHRPHSTIQQVQSLFPI 752
           +RP +T    +  H D  RPH+++   Q L  +
Sbjct: 108 KRPELTNRKSVVFHHDNARPHTSLVTRQKLLEL 140


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -3

Query: 850 QRPAVTXHHEMRVHXDCHRPHSTIQQVQSLFPI 752
           +RP +T    +  H D  RPH+++   Q L  +
Sbjct: 230 KRPELTNRKGVVFHHDNARPHTSLVTRQKLLEL 262


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 6/23 (26%), Positives = 12/23 (52%)
 Frame = -3

Query: 337 NPQLNSCVHEIYFNSFRFTLNQL 269
           N  +N C++ ++   FRF    +
Sbjct: 54  NSAINPCIYALFSKDFRFAFKSI 76


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 6/23 (26%), Positives = 12/23 (52%)
 Frame = -3

Query: 337 NPQLNSCVHEIYFNSFRFTLNQL 269
           N  +N C++ ++   FRF    +
Sbjct: 502 NSAINPCIYALFSKDFRFAFKSI 524


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = +1

Query: 112 FHVTSRSVCLFKTINHLFSNTSLSF--CLHFG*PFERFEKPLL 234
           F++T R   LF T+N +     +SF   L F  P +  EK  L
Sbjct: 236 FNITMRRKTLFYTVNIIIPCMGISFLTVLTFYLPSDSGEKVTL 278


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = +1

Query: 112 FHVTSRSVCLFKTINHLFSNTSLSF--CLHFG*PFERFEKPLL 234
           F++T R   LF T+N +     +SF   L F  P +  EK  L
Sbjct: 236 FNITMRRKTLFYTVNIIIPCMGISFLTVLTFYLPSDSGEKVTL 278


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 237,237
Number of Sequences: 438
Number of extensions: 4844
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)