Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_E04
(929 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.31
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 30 0.40
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.53
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 2.8
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 2.8
SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regula... 26 6.6
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 8.7
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 30.7 bits (66), Expect = 0.31
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 763 PXXGGXPPPPXXTXTQXXPPPXXNPPP 843
P GG PPPP PP PPP
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 30.7 bits (66), Expect = 0.31
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 780 PPPPXXNXNTXXPPPPXXPPP 842
PPPP PPPP PPP
Sbjct: 763 PPPPPPGVAGAGPPPPPPPPP 783
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 30.3 bits (65), Expect = 0.40
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -2
Query: 601 GGGXPXPPPXPXARGXXXGGGGGGGXXXXPXPXGGG 494
GGG PPP P G G GG G GGG
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGG 229
Score = 28.3 bits (60), Expect = 1.6
Identities = 28/87 (32%), Positives = 28/87 (32%)
Frame = -1
Query: 851 GXXGGGXXXGGGXXCVXVXXGGGGXPPXWGGXXFFFFLGXGGGXXXXXPXRXXXVGGAGG 672
G GGG GG G GG PP GG F G GG GG GG
Sbjct: 184 GHNGGGFGGFGG--------GSGGPPPGPGGFGGF---GGFGGEGHHHGGHGGFGGGPGG 232
Query: 671 GXXGKXXFXVXXXLXGGXXXPPXGGGG 591
G F GG GG G
Sbjct: 233 FEGGPGGFGGGPGGFGGGLGGFGGGPG 259
Score = 28.3 bits (60), Expect = 1.6
Identities = 24/73 (32%), Positives = 25/73 (34%), Gaps = 2/73 (2%)
Frame = -2
Query: 703 PXXXGWXGXGGGXWEXXXXXXGXXFXGGXXXPPXG--GGXPXPPPXPXARGXXXGGGGGG 530
P G+ G GG E F GG P G GG P G GG GGG
Sbjct: 202 PGPGGFGGFGGFGGEGHHHGGHGGFGGG----PGGFEGGPGGFGGGPGGFGGGLGGFGGG 257
Query: 529 GXXXXPXPXGGGG 491
P G GG
Sbjct: 258 PGGFGGGPGGHGG 270
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.9 bits (64), Expect = 0.53
Identities = 20/81 (24%), Positives = 21/81 (25%), Gaps = 3/81 (3%)
Frame = +1
Query: 670 PPPAPPTXXXRXGXXXXNXXXXXXXXXXXXPP---XXGGXPPPPXXTXTQXXPPPXXNPP 840
PPP PP+ R N PP G P PP PPP P
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPS 371
Query: 841 PXXPXXXXXXXXKAKNXXPPP 903
N PP
Sbjct: 372 TGRQPPPLSSSRAVSNPPAPP 392
Score = 29.1 bits (62), Expect = 0.93
Identities = 20/85 (23%), Positives = 22/85 (25%)
Frame = +1
Query: 598 PPXGGXXXPPXRXXXTXXNXFPXXPPPAPPTXXXRXGXXXXNXXXXXXXXXXXXPPXXGG 777
PP G T + P PP PP+ PP G
Sbjct: 404 PPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAP-AAPPLPPSAPIAPPLPAG 462
Query: 778 XPPPPXXTXTQXXPPPXXNPPPXXP 852
P P PPP P P P
Sbjct: 463 MPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 27.9 bits (59), Expect = 2.2
Identities = 21/87 (24%), Positives = 24/87 (27%)
Frame = +1
Query: 592 PPPPXGGXXXPPXRXXXTXXNXFPXXPPPAPPTXXXRXGXXXXNXXXXXXXXXXXXPPXX 771
PPPP P + + P PPP PP
Sbjct: 314 PPPPSRRNRGKPPIGNGSSNSSLP--PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPS 371
Query: 772 GGXPPPPXXTXTQXXPPPXXNPPPXXP 852
G PPP + PP PPP P
Sbjct: 372 TGRQPPPLSSSRAVSNPPA--PPPAIP 396
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/43 (30%), Positives = 16/43 (37%)
Frame = +3
Query: 774 GXPPPPXXNXNTXXPPPPXXPPPXXXXXXXPXXXXSKKXXPPP 902
G PP + N+ PP P PP P + PPP
Sbjct: 323 GKPPIGNGSSNSSLPP-PPPPPRSNAAGSIPLPPQGRSAPPPP 364
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/48 (27%), Positives = 15/48 (31%)
Frame = +3
Query: 780 PPPPXXNXNTXXPPPPXXPPPXXXXXXXPXXXXSKKXXPPPXXXXKXG 923
PPP PPPP P P + PPP + G
Sbjct: 209 PPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 256
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/48 (27%), Positives = 15/48 (31%)
Frame = +3
Query: 780 PPPPXXNXNTXXPPPPXXPPPXXXXXXXPXXXXSKKXXPPPXXXXKXG 923
PPP PPPP P P + PPP + G
Sbjct: 222 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 269
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/48 (27%), Positives = 15/48 (31%)
Frame = +3
Query: 780 PPPPXXNXNTXXPPPPXXPPPXXXXXXXPXXXXSKKXXPPPXXXXKXG 923
PPP PPPP P P + PPP + G
Sbjct: 235 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 282
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/48 (27%), Positives = 15/48 (31%)
Frame = +3
Query: 780 PPPPXXNXNTXXPPPPXXPPPXXXXXXXPXXXXSKKXXPPPXXXXKXG 923
PPP PPPP P P + PPP + G
Sbjct: 248 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 295
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/48 (27%), Positives = 15/48 (31%)
Frame = +3
Query: 780 PPPPXXNXNTXXPPPPXXPPPXXXXXXXPXXXXSKKXXPPPXXXXKXG 923
PPP PPPP P P + PPP + G
Sbjct: 261 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 308
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/48 (27%), Positives = 15/48 (31%)
Frame = +3
Query: 780 PPPPXXNXNTXXPPPPXXPPPXXXXXXXPXXXXSKKXXPPPXXXXKXG 923
PPP PPPP P P + PPP + G
Sbjct: 274 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 321
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/48 (27%), Positives = 15/48 (31%)
Frame = +3
Query: 780 PPPPXXNXNTXXPPPPXXPPPXXXXXXXPXXXXSKKXXPPPXXXXKXG 923
PPP PPPP P P + PPP + G
Sbjct: 287 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 334
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/41 (29%), Positives = 13/41 (31%)
Frame = +3
Query: 780 PPPPXXNXNTXXPPPPXXPPPXXXXXXXPXXXXSKKXXPPP 902
PPP PPPP P P + PPP
Sbjct: 300 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 340
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +2
Query: 776 GXPPPPXKXKHKXXPPPXXTPPX-PXPPXXXXXXXKQKTXXP 898
G PPPP PPP PP P PP K+K P
Sbjct: 7 GNPPPPP-------PPPGFEPPSQPPPPPPPGYVKKRKNKTP 41
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +3
Query: 774 GXPPPPXXNXNTXXPPPPXXPPP 842
G PPPP P P PPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPP 29
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 760 PPXXGGXPPPPXXTXTQXXPPPXXNPPP 843
PP PPPP PPP PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP--PPP 30
Score = 25.8 bits (54), Expect = 8.7
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +3
Query: 780 PPPPXXNXNTXXPPPPXXPP 839
PPPP PPP PP
Sbjct: 11 PPPPPPGFEPPSQPPPPPPP 30
>SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regulator
Prp45|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Frame = +2
Query: 782 PPPPXKXKHKXXPPPXXTPPXP---XPPXXXXXXXKQKTXXPP 901
P P K +HK P +PP P PP +Q PP
Sbjct: 211 PMEPPKFRHKKVPRGPPSPPPPVLHSPPRKVSAQEQQDWQIPP 253
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.8 bits (54), Expect = 8.7
Identities = 22/103 (21%), Positives = 24/103 (23%)
Frame = +1
Query: 592 PPPPXGGXXXPPXRXXXTXXNXFPXXPPPAPPTXXXRXGXXXXNXXXXXXXXXXXXPPXX 771
PP P PP T P PP G P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPV--PIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAP 1079
Query: 772 GGXPPPPXXTXTQXXPPPXXNPPPXXPXXXXXXXXKAKNXXPP 900
G PP P + P P PP A + PP
Sbjct: 1080 SGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/44 (31%), Positives = 14/44 (31%), Gaps = 1/44 (2%)
Frame = +2
Query: 776 GXPPPPXKXKH-KXXPPPXXTPPXPXPPXXXXXXXKQKTXXPPP 904
G PP P PPP PP P P T P P
Sbjct: 1177 GIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.151 0.531
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,037,938
Number of Sequences: 5004
Number of extensions: 34474
Number of successful extensions: 199
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 138
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 471335896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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