Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_E03
         (889 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M29493-1|AAA27728.1|   74|Apis mellifera protein ( Bee homeobox-...    26   0.40 
M29488-1|AAA27723.1|   86|Apis mellifera protein ( Bee homeobox-...    26   0.40 
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    26   0.40 
M29494-1|AAA27729.1|   74|Apis mellifera protein ( Bee homeobox-...    25   0.92 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   2.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   2.1  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   2.8  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   8.6  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   8.6  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    22   8.6  

>M29493-1|AAA27728.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H90. ).
          Length = 74

 Score = 26.2 bits (55), Expect = 0.40
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +2

Query: 80  QIT*PLCCTNQMICVWYKHRSLKYLK 157
           +I   LC T + I +W+++R +K+ K
Sbjct: 40  EIAHALCLTERQIKIWFQNRRMKWKK 65


>M29488-1|AAA27723.1|   86|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H55. ).
          Length = 86

 Score = 26.2 bits (55), Expect = 0.40
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +2

Query: 80  QIT*PLCCTNQMICVWYKHRSLKYLK 157
           +I   LC T + I +W+++R +K+ K
Sbjct: 40  EIAHALCLTERQIKIWFQNRRMKWKK 65


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 26.2 bits (55), Expect = 0.40
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +2

Query: 80  QIT*PLCCTNQMICVWYKHRSLKYLK 157
           +I   LC T + I +W+++R +K+ K
Sbjct: 302 EIAHALCLTERQIKIWFQNRRMKWKK 327


>M29494-1|AAA27729.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H15. ).
          Length = 74

 Score = 25.0 bits (52), Expect = 0.92
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +2

Query: 80  QIT*PLCCTNQMICVWYKHRSLKYLK 157
           +I   LC T + I +W+++R +K  K
Sbjct: 40  EIAHALCLTERQIKIWFQNRRMKLKK 65


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -1

Query: 652 APKALAVSMVRRPMGPAPSTSTTCPAETPP 563
           AP  L  S + + + P P+ S  C A   P
Sbjct: 420 APPMLLYSFIEQTLQPGPAVSLKCSAAGNP 449


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -1

Query: 652 APKALAVSMVRRPMGPAPSTSTTCPAETPP 563
           AP  L  S + + + P P+ S  C A   P
Sbjct: 420 APPMLLYSFIEQTLQPGPAVSLKCSAAGNP 449


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 625 VRRPMGPAPSTSTTCPAETPPL 560
           V+ P+G   ST +TC  E   L
Sbjct: 486 VKSPLGSVSSTESTCSGEVASL 507


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/21 (33%), Positives = 8/21 (38%)
 Frame = +1

Query: 535 SRWAFTRARGAESRRDTWCWY 597
           S W    A       D WC+Y
Sbjct: 937 SSWVSDNAHKVVDASDVWCYY 957


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +1

Query: 403 PXT*SSAPRPQYTETSSDI 459
           P    S P PQY  TSS I
Sbjct: 431 PALIQSQPSPQYPSTSSHI 449


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +1

Query: 601 ERDPSVSLPCSQLKPLE 651
           ER+ SVSL C + KP E
Sbjct: 83  EREASVSLFCPRAKPGE 99


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 230,693
Number of Sequences: 438
Number of extensions: 4741
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)