Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_D23
         (899 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    26   0.41 
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    26   0.41 
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   5.0  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    23   5.0  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    22   6.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   8.8  

>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 26.2 bits (55), Expect = 0.41
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -2

Query: 604 CFIIILYFQLLVFVIIFYNKIIS 536
           C  I  Y   L+F+I+FY++++S
Sbjct: 223 CIFIWAYVIPLIFIILFYSRLLS 245


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 26.2 bits (55), Expect = 0.41
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -2

Query: 604 CFIIILYFQLLVFVIIFYNKIIS 536
           C  I  Y   L+F+I+FY++++S
Sbjct: 223 CIFIWAYVIPLIFIILFYSRLLS 245


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 637 YFFKLVANDXICFIIILYFQLLVF 566
           Y F L  +D +  I+ L F+L VF
Sbjct: 71  YLFNLAVSDLLFLILGLPFELSVF 94


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -2

Query: 574 LVFVIIFYNKIISFYFNFVIHPFCVNSALMA 482
           + FV+I   + + ++FN ++   CV  A MA
Sbjct: 221 ITFVVIIRRRTLYYFFNLIVP--CVLIASMA 249


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +2

Query: 551 VKNDYKNK*LEI*YYNKTYXIISYKFKEIFN 643
           +K++   K + + +YN  Y +I    KEI++
Sbjct: 545 IKDEANKKGVSLRFYNVVYKLIDNIKKEIYD 575


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 7/34 (20%), Positives = 18/34 (52%)
 Frame = -1

Query: 293 QNYLRNASFKKYILQTQNNIKKIFSSARYYPNTN 192
           + YLRN +  +++L+      ++ +   ++P  N
Sbjct: 10  RRYLRNRNQLQHVLEETQQALELINLENFFPEEN 43


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,245
Number of Sequences: 438
Number of extensions: 4008
Number of successful extensions: 21
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)