Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_D22
(910 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin pr... 291 6e-79
AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin ... 291 6e-79
Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical pr... 106 2e-23
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 31 1.5
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 31 1.5
Z29094-14|CAJ43434.1| 893|Caenorhabditis elegans Hypothetical p... 29 4.6
Z29094-10|CAD45580.2| 965|Caenorhabditis elegans Hypothetical p... 29 4.6
Z29094-9|CAA82347.3| 960|Caenorhabditis elegans Hypothetical pr... 29 4.6
AY450852-1|AAR18092.1| 960|Caenorhabditis elegans Tousled-like ... 29 4.6
Z78198-12|CAJ85750.1| 205|Caenorhabditis elegans Hypothetical p... 28 8.0
>X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin
protein.
Length = 395
Score = 291 bits (713), Expect = 6e-79
Identities = 133/234 (56%), Positives = 164/234 (70%), Gaps = 1/234 (0%)
Frame = +2
Query: 146 INCDVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYA 325
++ +V+F+E+F D SWE WV S+H +FG FKL+AGKFF D+G++TS+DA+FY+
Sbjct: 13 VSAEVYFKEEFNDASWEKRWVQSKHKD-DFGAFKLSAGKFFDVESRDQGIQTSQDAKFYS 71
Query: 326 LSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPD 502
+ KF K FSN+GK LV+Q+TVKHEQ IDCGGGY+KV + D HGETPY +MFGPD
Sbjct: 72 RAAKFDKDFSNKGKTLVIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFGPD 131
Query: 503 ICGPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGD 682
ICGP T++VHVI +YKG+N LIKK+I CK D THLYTLI+ DNTYEV ID E ++G
Sbjct: 132 ICGP-TRRVHVILNYKGENKLIKKEITCKSDELTHLYTLILNSDNTYEVKIDGESAQTGS 190
Query: 683 LXADWDFLPPKKIKDPEAKKPEDWXXXXXXXXXXXXXXXXXXXXXHIPDPDATK 844
L DWD LP KKIKDP+AKKPEDW HIPDPDA K
Sbjct: 191 LEEDWDLLPAKKIKDPDAKKPEDWDEREYIDDAEDAKPEDWEKPEHIPDPDAKK 244
Score = 33.5 bits (73), Expect = 0.21
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2
Query: 692 DWDFLPPKKIKDPEAKKPEDW 754
DW+ P+ I DP+AKKPEDW
Sbjct: 230 DWE--KPEHIPDPDAKKPEDW 248
>AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin
protein 1 protein.
Length = 395
Score = 291 bits (713), Expect = 6e-79
Identities = 133/234 (56%), Positives = 164/234 (70%), Gaps = 1/234 (0%)
Frame = +2
Query: 146 INCDVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYA 325
++ +V+F+E+F D SWE WV S+H +FG FKL+AGKFF D+G++TS+DA+FY+
Sbjct: 13 VSAEVYFKEEFNDASWEKRWVQSKHKD-DFGAFKLSAGKFFDVESRDQGIQTSQDAKFYS 71
Query: 326 LSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPD 502
+ KF K FSN+GK LV+Q+TVKHEQ IDCGGGY+KV + D HGETPY +MFGPD
Sbjct: 72 RAAKFDKDFSNKGKTLVIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFGPD 131
Query: 503 ICGPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGD 682
ICGP T++VHVI +YKG+N LIKK+I CK D THLYTLI+ DNTYEV ID E ++G
Sbjct: 132 ICGP-TRRVHVILNYKGENKLIKKEITCKSDELTHLYTLILNSDNTYEVKIDGESAQTGS 190
Query: 683 LXADWDFLPPKKIKDPEAKKPEDWXXXXXXXXXXXXXXXXXXXXXHIPDPDATK 844
L DWD LP KKIKDP+AKKPEDW HIPDPDA K
Sbjct: 191 LEEDWDLLPAKKIKDPDAKKPEDWDEREYIDDAEDAKPEDWEKPEHIPDPDAKK 244
Score = 33.5 bits (73), Expect = 0.21
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2
Query: 692 DWDFLPPKKIKDPEAKKPEDW 754
DW+ P+ I DP+AKKPEDW
Sbjct: 230 DWE--KPEHIPDPDAKKPEDW 248
>Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical
protein ZK632.6 protein.
Length = 619
Score = 106 bits (254), Expect = 2e-23
Identities = 64/174 (36%), Positives = 90/174 (51%), Gaps = 15/174 (8%)
Frame = +2
Query: 278 EDDKGLKTSEDARFYALSRKFK-PFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFD--CKL 448
E D GL AR +A++ K PF+ + VVQ+ +K E+ +CGGGYLK+ +
Sbjct: 107 EGDLGLIVKTKARHHAIAAKLNTPFAFDANTFVVQYDIKFEEGQECGGGYLKLLSEGAEK 166
Query: 449 EQKDMHGETPYEIMFGPDICGPGTKKVHVIFSYKGKNHLIKKDIRCK----------DDV 598
+ + +T Y IMFGPD CG T KVH+IF YK + + DD
Sbjct: 167 DLANFQDKTAYTIMFGPDKCG-ATGKVHLIFRYKNPINGTISEYHANQPTTIGSTYWDDH 225
Query: 599 YTHLYTLIVKPDNTYEVLIDNEKVESGDLXADWD--FLPPKKIKDPEAKKPEDW 754
THL+TL+VKP Y V +D + + G++ +D PPK+I D KP DW
Sbjct: 226 NTHLFTLVVKPTGEYSVSVDGKSLYYGNMMSDVTPALTPPKQIFDETDLKPVDW 279
Score = 35.1 bits (77), Expect = 0.070
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +2
Query: 623 VKPDNTYEVLIDNEKVESGDLXADWDFLPPKKIKDPEAKKPEDW 754
VKPD+ E + E+ DW+ + I DPEAKKP+DW
Sbjct: 291 VKPDDWDENEPQSVVDEAATKPYDWNEEENELIADPEAKKPQDW 334
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 656 DNEKVESGDLXADWDFLPPKKIKDPEAKKPEDW 754
+N + ES DWD P+ + D A KP DW
Sbjct: 283 ENIEDESAVKPDDWDENEPQSVVDEAATKPYDW 315
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical protein
K07E12.1a protein.
Length = 13100
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +2
Query: 554 KNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEV-LIDNEKVESGDLXA 691
K I+K++ C+D THL L D+TY V ++ NE+V++ A
Sbjct: 12856 KEKWIRKEVTCRDSFGTHLNEL--PSDHTYTVCVMTNERVDNSTALA 12900
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin protein.
Length = 13100
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +2
Query: 554 KNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEV-LIDNEKVESGDLXA 691
K I+K++ C+D THL L D+TY V ++ NE+V++ A
Sbjct: 12856 KEKWIRKEVTCRDSFGTHLNEL--PSDHTYTVCVMTNERVDNSTALA 12900
>Z29094-14|CAJ43434.1| 893|Caenorhabditis elegans Hypothetical
protein C07A9.3c protein.
Length = 893
Score = 29.1 bits (62), Expect = 4.6
Identities = 21/80 (26%), Positives = 31/80 (38%)
Frame = -2
Query: 282 SSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTTTSTTA 103
+ GS K PAV N NS+ Q+ HE ++ T +N T T
Sbjct: 254 NQGSPKRQPAVQQNGSNSYDSQQQQPQMNQHEMQNSYWGVATPSLGVNNRGTPTPTQQQH 313
Query: 102 FIFDSQYHLLQTKDRPRNQN 43
+ DS + Q+ NQ+
Sbjct: 314 YSSDSNSNSNQSPPGQGNQS 333
>Z29094-10|CAD45580.2| 965|Caenorhabditis elegans Hypothetical
protein C07A9.3b protein.
Length = 965
Score = 29.1 bits (62), Expect = 4.6
Identities = 21/80 (26%), Positives = 31/80 (38%)
Frame = -2
Query: 282 SSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTTTSTTA 103
+ GS K PAV N NS+ Q+ HE ++ T +N T T
Sbjct: 321 NQGSPKRQPAVQQNGSNSYDSQQQQPQMNQHEMQNSYWGVATPSLGVNNRGTPTPTQQQH 380
Query: 102 FIFDSQYHLLQTKDRPRNQN 43
+ DS + Q+ NQ+
Sbjct: 381 YSSDSNSNSNQSPPGQGNQS 400
>Z29094-9|CAA82347.3| 960|Caenorhabditis elegans Hypothetical
protein C07A9.3a protein.
Length = 960
Score = 29.1 bits (62), Expect = 4.6
Identities = 21/80 (26%), Positives = 31/80 (38%)
Frame = -2
Query: 282 SSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTTTSTTA 103
+ GS K PAV N NS+ Q+ HE ++ T +N T T
Sbjct: 321 NQGSPKRQPAVQQNGSNSYDSQQQQPQMNQHEMQNSYWGVATPSLGVNNRGTPTPTQQQH 380
Query: 102 FIFDSQYHLLQTKDRPRNQN 43
+ DS + Q+ NQ+
Sbjct: 381 YSSDSNSNSNQSPPGQGNQS 400
>AY450852-1|AAR18092.1| 960|Caenorhabditis elegans Tousled-like
kinase protein.
Length = 960
Score = 29.1 bits (62), Expect = 4.6
Identities = 21/80 (26%), Positives = 31/80 (38%)
Frame = -2
Query: 282 SSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTTTSTTA 103
+ GS K PAV N NS+ Q+ HE ++ T +N T T
Sbjct: 321 NQGSPKRQPAVQQNGSNSYDSQQQQPQMNQHEMQNSYWGVATPSLGVNNRGTPTPTQQQH 380
Query: 102 FIFDSQYHLLQTKDRPRNQN 43
+ DS + Q+ NQ+
Sbjct: 381 YSSDSNSNSNQSPPGQGNQS 400
>Z78198-12|CAJ85750.1| 205|Caenorhabditis elegans Hypothetical
protein F55C5.11 protein.
Length = 205
Score = 28.3 bits (60), Expect = 8.0
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +3
Query: 648 SSLTMRKLNLATXRQTGTSFRLRKSRTLKPRNQKTGMTSPLFQTPKTRSLRIGTSLNTF 824
S++ +R+++ T G F R+SR N + P T L + TSL+TF
Sbjct: 127 SAVHLREMHTCTVTGCGKQFSSRRSRNRHSSNNNPKLHMPESLTLTGSGLSMKTSLDTF 185
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,218,587
Number of Sequences: 27780
Number of extensions: 503712
Number of successful extensions: 1607
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1593
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -