Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_D19
         (879 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D87071-1|BAA13240.1| 2035|Homo sapiens KIAA0233 protein.               31   7.3  
BC150271-1|AAI50272.1| 2035|Homo sapiens family with sequence si...    31   7.3  
AL359392-1|CAI40208.2| 1055|Homo sapiens LIM domain 7 protein.         31   7.3  
AL137782-2|CAI40006.2| 1055|Homo sapiens LIM domain 7 protein.         31   7.3  
AL137121-1|CAI39479.2| 1055|Homo sapiens LIM domain 7 protein.         31   7.3  
AF174600-1|AAF04521.1|  255|Homo sapiens F-box protein Fbx20 pro...    31   7.3  
AB161230-1|BAF03565.1| 2090|Homo sapiens Mib protein.                  31   7.3  

>D87071-1|BAA13240.1| 2035|Homo sapiens KIAA0233 protein.
          Length = 2035

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 31/83 (37%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
 Frame = +3

Query: 375  ESNPVRHDLSPLAAAT--GNRISRARYVG-GATEFLKWWPNYGYTRRTVFGICALLKPVT 545
            E+NPV+  L P   A   G RI   R  G GAT FL+WW       RT    C LL  V 
Sbjct: 1881 EANPVKQ-LQPNEEADYLGVRIQLRREQGAGATGFLEWWVIELQECRT---DCNLLPMVI 1936

Query: 546  FGKRVGSS*SGKQTTAGSGGFFV 614
            F  +V     G     G  G +V
Sbjct: 1937 FSDKVSPPSLGFLAGYGIMGLYV 1959


>BC150271-1|AAI50272.1| 2035|Homo sapiens family with sequence
            similarity 38, member A protein.
          Length = 2035

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 31/83 (37%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
 Frame = +3

Query: 375  ESNPVRHDLSPLAAAT--GNRISRARYVG-GATEFLKWWPNYGYTRRTVFGICALLKPVT 545
            E+NPV+  L P   A   G RI   R  G GAT FL+WW       RT    C LL  V 
Sbjct: 1881 EANPVKQ-LQPNEEADYLGVRIQLRREQGAGATGFLEWWVIELQECRT---DCNLLPMVI 1936

Query: 546  FGKRVGSS*SGKQTTAGSGGFFV 614
            F  +V     G     G  G +V
Sbjct: 1937 FSDKVSPPSLGFLAGYGIMGLYV 1959


>AL359392-1|CAI40208.2| 1055|Homo sapiens LIM domain 7 protein.
          Length = 1055

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = +3

Query: 129 PDRTIKIPGVSPWKLPRALSXFRPCRLPDTCPPFSLREAWRFLI 260
           PDR   +P   PW LP  +     C L  TCP      + R L+
Sbjct: 210 PDRYHPVPFPEPWTLPPEIQAKFLCVLERTCPSKEKSNSCRILV 253


>AL137782-2|CAI40006.2| 1055|Homo sapiens LIM domain 7 protein.
          Length = 1055

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = +3

Query: 129 PDRTIKIPGVSPWKLPRALSXFRPCRLPDTCPPFSLREAWRFLI 260
           PDR   +P   PW LP  +     C L  TCP      + R L+
Sbjct: 210 PDRYHPVPFPEPWTLPPEIQAKFLCVLERTCPSKEKSNSCRILV 253


>AL137121-1|CAI39479.2| 1055|Homo sapiens LIM domain 7 protein.
          Length = 1055

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = +3

Query: 129 PDRTIKIPGVSPWKLPRALSXFRPCRLPDTCPPFSLREAWRFLI 260
           PDR   +P   PW LP  +     C L  TCP      + R L+
Sbjct: 210 PDRYHPVPFPEPWTLPPEIQAKFLCVLERTCPSKEKSNSCRILV 253


>AF174600-1|AAF04521.1|  255|Homo sapiens F-box protein Fbx20
           protein.
          Length = 255

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = +3

Query: 129 PDRTIKIPGVSPWKLPRALSXFRPCRLPDTCPPFSLREAWRFLI 260
           PDR   +P   PW LP  +     C L  TCP      + R L+
Sbjct: 84  PDRYHPVPFPEPWTLPPEIQAKFLCVLERTCPSKEKSNSCRILV 127


>AB161230-1|BAF03565.1| 2090|Homo sapiens Mib protein.
          Length = 2090

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 31/83 (37%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
 Frame = +3

Query: 375  ESNPVRHDLSPLAAAT--GNRISRARYVG-GATEFLKWWPNYGYTRRTVFGICALLKPVT 545
            E+NPV+  L P   A   G RI   R  G GAT FL+WW       RT    C LL  V 
Sbjct: 1936 EANPVKQ-LQPNEEADYLGVRIQLRREQGAGATGFLEWWVIELQECRT---DCNLLPMVI 1991

Query: 546  FGKRVGSS*SGKQTTAGSGGFFV 614
            F  +V     G     G  G +V
Sbjct: 1992 FSDKVSPPSLGFLAGYGIMGLYV 2014


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,431,421
Number of Sequences: 237096
Number of extensions: 2617576
Number of successful extensions: 9388
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9386
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)