Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_D15
(891 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB209851-1|BAD93088.1| 2331|Homo sapiens Basement membrane-speci... 36 0.15
X62515-1|CAA44373.1| 4393|Homo sapiens Human basement membrane h... 35 0.46
M85289-1|AAA52700.1| 4391|Homo sapiens heparan sulfate proteogly... 34 0.60
AL590556-2|CAH71870.1| 4391|Homo sapiens heparan sulfate proteog... 34 0.60
AL590103-2|CAI12125.1| 4391|Homo sapiens heparan sulfate proteog... 34 0.60
AL445795-1|CAC18534.1| 4370|Homo sapiens heparan sulfate proteog... 34 0.60
Z95636-1|CAB09137.1| 953|Homo sapiens laminin alpha 5 chain pro... 31 4.2
BC003355-1|AAH03355.1| 670|Homo sapiens LAMA5 protein protein. 31 4.2
AL354836-5|CAC22310.1| 3690|Homo sapiens laminin, alpha 5 protein. 31 4.2
AF443072-1|AAM12527.1| 3695|Homo sapiens laminin alpha5 chain pr... 31 4.2
AB011105-1|BAA25459.1| 1645|Homo sapiens KIAA0533 protein protein. 31 4.2
AK057327-1|BAB71429.1| 721|Homo sapiens protein ( Homo sapiens ... 31 5.6
AF463518-1|AAL68839.1| 1311|Homo sapiens cell recognition protei... 31 5.6
AB100094-1|BAC55272.1| 1308|Homo sapiens hypothetical protein pr... 31 5.6
AB051550-1|BAB21854.2| 1322|Homo sapiens KIAA1763 protein protein. 31 5.6
D87469-1|BAA13407.2| 2854|Homo sapiens KIAA0279 protein protein. 31 7.4
BX537849-1|CAD97857.1| 1626|Homo sapiens hypothetical protein pr... 31 7.4
AY362728-1|AAR13367.1| 2677|Homo sapiens ataxia/oculomotor aprax... 31 7.4
AL390252-1|CAI13170.1| 2923|Homo sapiens cadherin, EGF LAG seven... 31 7.4
AL353701-2|CAM14151.1| 2677|Homo sapiens senataxin protein. 31 7.4
AL353701-1|CAM14150.1| 670|Homo sapiens senataxin protein. 31 7.4
AL159997-2|CAI40854.1| 2677|Homo sapiens senataxin protein. 31 7.4
AL159997-1|CAI40858.2| 670|Homo sapiens senataxin protein. 31 7.4
AK125448-1|BAC86166.1| 635|Homo sapiens protein ( Homo sapiens ... 31 7.4
AF234887-1|AAG00080.1| 2923|Homo sapiens FLAMINGO 1 protein. 31 7.4
AB065955-1|BAC06168.1| 2923|Homo sapiens seven transmembrane hel... 31 7.4
AB014525-1|BAA31600.2| 2663|Homo sapiens KIAA0625 protein protein. 31 7.4
X96395-1|CAA65259.2| 1545|Homo sapiens canalicular multidrug res... 30 9.8
U63970-1|AAB39892.1| 1545|Homo sapiens canalicular multispecific... 30 9.8
U49248-1|AAB09422.1| 1545|Homo sapiens canalicular multispecific... 30 9.8
AL392107-3|CAI11010.1| 1545|Homo sapiens ATP-binding cassette, s... 30 9.8
AL133353-7|CAI14502.1| 1545|Homo sapiens ATP-binding cassette, s... 30 9.8
AJ132244-1|CAB45309.1| 1545|Homo sapiens multidrug resistance pr... 30 9.8
>AB209851-1|BAD93088.1| 2331|Homo sapiens Basement membrane-specific
heparan sulfate proteoglycan core protein precursor
protein.
Length = 2331
Score = 36.3 bits (80), Expect = 0.15
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Frame = +1
Query: 76 GISNVMNADSNIYIGGIPSWLNIHG---YPGFIGCIENVETTDSHRG------LNLRDTA 228
G + +NA N+YIGG P + G G GC++N+ + G L+L+ A
Sbjct: 2261 GPNVAVNAKGNVYIGGAPDVATLTGGRFSSGITGCVKNLVLHSARPGAPPPQPLDLQHRA 2320
Query: 229 VAGRNTQLC 255
AG NT+ C
Sbjct: 2321 QAGANTRPC 2329
>X62515-1|CAA44373.1| 4393|Homo sapiens Human basement membrane
heparan sulfate proteoglycan core protein protein.
Length = 4393
Score = 34.7 bits (76), Expect = 0.46
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Frame = +1
Query: 76 GISNVMNADSNIYIGGIPSWLNIHG---YPGFIGCIENVETTDSHRG------LNLRDTA 228
G + +NA +IYIGG P + G G GC++N+ + G L+L+ A
Sbjct: 4323 GPNVAVNAKGSIYIGGAPDVATLTGGRFSSGITGCVKNLVLHSARPGAPPPQPLDLQHRA 4382
Query: 229 VAGRNTQLC 255
AG NT+ C
Sbjct: 4383 QAGANTRPC 4391
>M85289-1|AAA52700.1| 4391|Homo sapiens heparan sulfate proteoglycan
protein.
Length = 4391
Score = 34.3 bits (75), Expect = 0.60
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Frame = +1
Query: 76 GISNVMNADSNIYIGGIPSWLNIHG---YPGFIGCIENVETTDSHRG------LNLRDTA 228
G + +NA ++YIGG P + G G GC++N+ + G L+L+ A
Sbjct: 4321 GPNVAVNAKGSVYIGGAPDVATLTGGRFSSGITGCVKNLVLHSARPGAPPPQPLDLQHRA 4380
Query: 229 VAGRNTQLC 255
AG NT+ C
Sbjct: 4381 QAGANTRPC 4389
>AL590556-2|CAH71870.1| 4391|Homo sapiens heparan sulfate proteoglycan
2 protein.
Length = 4391
Score = 34.3 bits (75), Expect = 0.60
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Frame = +1
Query: 76 GISNVMNADSNIYIGGIPSWLNIHG---YPGFIGCIENVETTDSHRG------LNLRDTA 228
G + +NA ++YIGG P + G G GC++N+ + G L+L+ A
Sbjct: 4321 GPNVAVNAKGSVYIGGAPDVATLTGGRFSSGITGCVKNLVLHSARPGAPPPQPLDLQHRA 4380
Query: 229 VAGRNTQLC 255
AG NT+ C
Sbjct: 4381 QAGANTRPC 4389
>AL590103-2|CAI12125.1| 4391|Homo sapiens heparan sulfate proteoglycan
2 protein.
Length = 4391
Score = 34.3 bits (75), Expect = 0.60
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Frame = +1
Query: 76 GISNVMNADSNIYIGGIPSWLNIHG---YPGFIGCIENVETTDSHRG------LNLRDTA 228
G + +NA ++YIGG P + G G GC++N+ + G L+L+ A
Sbjct: 4321 GPNVAVNAKGSVYIGGAPDVATLTGGRFSSGITGCVKNLVLHSARPGAPPPQPLDLQHRA 4380
Query: 229 VAGRNTQLC 255
AG NT+ C
Sbjct: 4381 QAGANTRPC 4389
>AL445795-1|CAC18534.1| 4370|Homo sapiens heparan sulfate proteoglycan
perlecan protein.
Length = 4370
Score = 34.3 bits (75), Expect = 0.60
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Frame = +1
Query: 76 GISNVMNADSNIYIGGIPSWLNIHG---YPGFIGCIENVETTDSHRG------LNLRDTA 228
G + +NA ++YIGG P + G G GC++N+ + G L+L+ A
Sbjct: 4300 GPNVAVNAKGSVYIGGAPDVATLTGGRFSSGITGCVKNLVLHSARPGAPPPQPLDLQHRA 4359
Query: 229 VAGRNTQLC 255
AG NT+ C
Sbjct: 4360 QAGANTRPC 4368
>Z95636-1|CAB09137.1| 953|Homo sapiens laminin alpha 5 chain
protein.
Length = 953
Score = 31.5 bits (68), Expect = 4.2
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +1
Query: 55 DKXAP-ATGISNVMNADSNIYIGGIPSWLN---IHGYPGFIGCIE 177
D AP A G+ N+ D Y+GG PS + +PG+ GCIE
Sbjct: 115 DTVAPGAEGLLNLRPDDFVFYVGGYPSTFTPPPLLRFPGYRGCIE 159
>BC003355-1|AAH03355.1| 670|Homo sapiens LAMA5 protein protein.
Length = 670
Score = 31.5 bits (68), Expect = 4.2
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +1
Query: 55 DKXAP-ATGISNVMNADSNIYIGGIPSWLN---IHGYPGFIGCIE 177
D AP A G+ N+ D Y+GG PS + +PG+ GCIE
Sbjct: 63 DTVAPGAEGLLNLRPDDFVFYVGGYPSTFTPPPLLRFPGYRGCIE 107
>AL354836-5|CAC22310.1| 3690|Homo sapiens laminin, alpha 5 protein.
Length = 3690
Score = 31.5 bits (68), Expect = 4.2
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +1
Query: 55 DKXAP-ATGISNVMNADSNIYIGGIPSWLN---IHGYPGFIGCIE 177
D AP A G+ N+ D Y+GG PS + +PG+ GCIE
Sbjct: 2857 DTVAPGAEGLLNLRPDDFVFYVGGYPSTFTPPPLLRFPGYRGCIE 2901
>AF443072-1|AAM12527.1| 3695|Homo sapiens laminin alpha5 chain
precursor protein.
Length = 3695
Score = 31.5 bits (68), Expect = 4.2
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +1
Query: 55 DKXAP-ATGISNVMNADSNIYIGGIPSWLN---IHGYPGFIGCIE 177
D AP A G+ N+ D Y+GG PS + +PG+ GCIE
Sbjct: 2857 DTVAPGAEGLLNLRPDDFVFYVGGYPSTFTPPPLLRFPGYRGCIE 2901
>AB011105-1|BAA25459.1| 1645|Homo sapiens KIAA0533 protein protein.
Length = 1645
Score = 31.5 bits (68), Expect = 4.2
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +1
Query: 55 DKXAP-ATGISNVMNADSNIYIGGIPSWLN---IHGYPGFIGCIE 177
D AP A G+ N+ D Y+GG PS + +PG+ GCIE
Sbjct: 807 DTVAPGAEGLLNLRPDDFVFYVGGYPSTFTPPPLLRFPGYRGCIE 851
>AK057327-1|BAB71429.1| 721|Homo sapiens protein ( Homo sapiens
cDNA FLJ32765 fis, clone TESTI2001852, weakly similar to
Homo sapiens contactin associated protein (Caspr) mRNA.
).
Length = 721
Score = 31.1 bits (67), Expect = 5.6
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +1
Query: 70 ATGISNVMNADSNIYIGGIPSWLNIHGYP--GFIGCIENV 183
A G N+MN D I GGIP+ +P F GC+EN+
Sbjct: 272 ARGEFNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENL 311
>AF463518-1|AAL68839.1| 1311|Homo sapiens cell recognition protein
CASPR4 protein.
Length = 1311
Score = 31.1 bits (67), Expect = 5.6
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +1
Query: 70 ATGISNVMNADSNIYIGGIPSWLNIHGYP--GFIGCIENV 183
A G N+MN D I GGIP+ +P F GC+EN+
Sbjct: 300 ARGEFNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENL 339
>AB100094-1|BAC55272.1| 1308|Homo sapiens hypothetical protein
protein.
Length = 1308
Score = 31.1 bits (67), Expect = 5.6
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +1
Query: 70 ATGISNVMNADSNIYIGGIPSWLNIHGYP--GFIGCIENV 183
A G N+MN D I GGIP+ +P F GC+EN+
Sbjct: 297 ARGEFNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENL 336
>AB051550-1|BAB21854.2| 1322|Homo sapiens KIAA1763 protein protein.
Length = 1322
Score = 31.1 bits (67), Expect = 5.6
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +1
Query: 70 ATGISNVMNADSNIYIGGIPSWLNIHGYP--GFIGCIENV 183
A G N+MN D I GGIP+ +P F GC+EN+
Sbjct: 311 ARGEFNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENL 350
>D87469-1|BAA13407.2| 2854|Homo sapiens KIAA0279 protein protein.
Length = 2854
Score = 30.7 bits (66), Expect = 7.4
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 103 SNIYIGGIPSWLNIHGYPGFIGCIENVETTDSHRGLNLRD 222
SNI +GGIP GF GC++ V +D+ G+N D
Sbjct: 1671 SNITVGGIPGPAGGVAR-GFRGCLQGVRVSDTPEGVNSLD 1709
>BX537849-1|CAD97857.1| 1626|Homo sapiens hypothetical protein
protein.
Length = 1626
Score = 30.7 bits (66), Expect = 7.4
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = -1
Query: 222 VSQIQSSVAVRCLNVLNATDEAWISVDVQPAWYSTDVYVGVSVHDVGDTGGRRALVNSVK 43
VS I+ +CL++L + + W+ V+ A T + S G+ A+++S+
Sbjct: 463 VSVIELHRNKKCLHLLWVSSQQWVEAVVKCAKLPTTAFTRSSEKSSGNCSKGTAMISSLS 522
Query: 42 LKEFPSS 22
L PS+
Sbjct: 523 LHSMPSN 529
>AY362728-1|AAR13367.1| 2677|Homo sapiens ataxia/oculomotor apraxia
protein 2 protein.
Length = 2677
Score = 30.7 bits (66), Expect = 7.4
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = -1
Query: 222 VSQIQSSVAVRCLNVLNATDEAWISVDVQPAWYSTDVYVGVSVHDVGDTGGRRALVNSVK 43
VS I+ +CL++L + + W+ V+ A T + S G+ A+++S+
Sbjct: 463 VSVIELHRNKKCLHLLWVSSQQWVEAVVKCAKLPTTAFTRSSEKSSGNCSKGTAMISSLS 522
Query: 42 LKEFPSS 22
L PS+
Sbjct: 523 LHSMPSN 529
>AL390252-1|CAI13170.1| 2923|Homo sapiens cadherin, EGF LAG seven-pass
G-type receptor 2 (flamingo homolog, Drosophila) protein.
Length = 2923
Score = 30.7 bits (66), Expect = 7.4
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 103 SNIYIGGIPSWLNIHGYPGFIGCIENVETTDSHRGLNLRD 222
SNI +GGIP GF GC++ V +D+ G+N D
Sbjct: 1740 SNITVGGIPGPAGGVAR-GFRGCLQGVRVSDTPEGVNSLD 1778
>AL353701-2|CAM14151.1| 2677|Homo sapiens senataxin protein.
Length = 2677
Score = 30.7 bits (66), Expect = 7.4
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = -1
Query: 222 VSQIQSSVAVRCLNVLNATDEAWISVDVQPAWYSTDVYVGVSVHDVGDTGGRRALVNSVK 43
VS I+ +CL++L + + W+ V+ A T + S G+ A+++S+
Sbjct: 463 VSVIELHRNKKCLHLLWVSSQQWVEAVVKCAKLPTTAFTRSSEKSSGNCSKGTAMISSLS 522
Query: 42 LKEFPSS 22
L PS+
Sbjct: 523 LHSMPSN 529
>AL353701-1|CAM14150.1| 670|Homo sapiens senataxin protein.
Length = 670
Score = 30.7 bits (66), Expect = 7.4
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = -1
Query: 222 VSQIQSSVAVRCLNVLNATDEAWISVDVQPAWYSTDVYVGVSVHDVGDTGGRRALVNSVK 43
VS I+ +CL++L + + W+ V+ A T + S G+ A+++S+
Sbjct: 463 VSVIELHRNKKCLHLLWVSSQQWVEAVVKCAKLPTTAFTRSSEKSSGNCSKGTAMISSLS 522
Query: 42 LKEFPSS 22
L PS+
Sbjct: 523 LHSMPSN 529
>AL159997-2|CAI40854.1| 2677|Homo sapiens senataxin protein.
Length = 2677
Score = 30.7 bits (66), Expect = 7.4
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = -1
Query: 222 VSQIQSSVAVRCLNVLNATDEAWISVDVQPAWYSTDVYVGVSVHDVGDTGGRRALVNSVK 43
VS I+ +CL++L + + W+ V+ A T + S G+ A+++S+
Sbjct: 463 VSVIELHRNKKCLHLLWVSSQQWVEAVVKCAKLPTTAFTRSSEKSSGNCSKGTAMISSLS 522
Query: 42 LKEFPSS 22
L PS+
Sbjct: 523 LHSMPSN 529
>AL159997-1|CAI40858.2| 670|Homo sapiens senataxin protein.
Length = 670
Score = 30.7 bits (66), Expect = 7.4
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = -1
Query: 222 VSQIQSSVAVRCLNVLNATDEAWISVDVQPAWYSTDVYVGVSVHDVGDTGGRRALVNSVK 43
VS I+ +CL++L + + W+ V+ A T + S G+ A+++S+
Sbjct: 463 VSVIELHRNKKCLHLLWVSSQQWVEAVVKCAKLPTTAFTRSSEKSSGNCSKGTAMISSLS 522
Query: 42 LKEFPSS 22
L PS+
Sbjct: 523 LHSMPSN 529
>AK125448-1|BAC86166.1| 635|Homo sapiens protein ( Homo sapiens
cDNA FLJ43459 fis, clone OCBBF2035564. ).
Length = 635
Score = 30.7 bits (66), Expect = 7.4
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = -1
Query: 222 VSQIQSSVAVRCLNVLNATDEAWISVDVQPAWYSTDVYVGVSVHDVGDTGGRRALVNSVK 43
VS I+ +CL++L + + W+ V+ A T + S G+ A+++S+
Sbjct: 463 VSVIELHRNKKCLHLLWVSSQQWVEAVVKCAKLPTTAFTRSSEKSSGNCSKGTAMISSLS 522
Query: 42 LKEFPSS 22
L PS+
Sbjct: 523 LHSMPSN 529
>AF234887-1|AAG00080.1| 2923|Homo sapiens FLAMINGO 1 protein.
Length = 2923
Score = 30.7 bits (66), Expect = 7.4
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 103 SNIYIGGIPSWLNIHGYPGFIGCIENVETTDSHRGLNLRD 222
SNI +GGIP GF GC++ V +D+ G+N D
Sbjct: 1740 SNITVGGIPGPAGGVAR-GFRGCLQGVRVSDTPEGVNSLD 1778
>AB065955-1|BAC06168.1| 2923|Homo sapiens seven transmembrane helix
receptor protein.
Length = 2923
Score = 30.7 bits (66), Expect = 7.4
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 103 SNIYIGGIPSWLNIHGYPGFIGCIENVETTDSHRGLNLRD 222
SNI +GGIP GF GC++ V +D+ G+N D
Sbjct: 1740 SNITVGGIPGPAGGVAR-GFRGCLQGVRVSDTPEGVNSLD 1778
>AB014525-1|BAA31600.2| 2663|Homo sapiens KIAA0625 protein protein.
Length = 2663
Score = 30.7 bits (66), Expect = 7.4
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = -1
Query: 222 VSQIQSSVAVRCLNVLNATDEAWISVDVQPAWYSTDVYVGVSVHDVGDTGGRRALVNSVK 43
VS I+ +CL++L + + W+ V+ A T + S G+ A+++S+
Sbjct: 449 VSVIELHRNKKCLHLLWVSSQQWVEAVVKCAKLPTTAFTRSSEKSSGNCSKGTAMISSLS 508
Query: 42 LKEFPSS 22
L PS+
Sbjct: 509 LHSMPSN 515
>X96395-1|CAA65259.2| 1545|Homo sapiens canalicular multidrug
resistance protein protein.
Length = 1545
Score = 30.3 bits (65), Expect = 9.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 251 YAETPDLSSSKRKLRNN*VKNLYAFIKLECIVYFKY 358
+A P + LR +KNL AF +L+C+V F +
Sbjct: 515 FAWEPSFRDQVQNLRKKELKNLLAFSQLQCVVIFVF 550
>U63970-1|AAB39892.1| 1545|Homo sapiens canalicular multispecific
organic anion transporter protein.
Length = 1545
Score = 30.3 bits (65), Expect = 9.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 251 YAETPDLSSSKRKLRNN*VKNLYAFIKLECIVYFKY 358
+A P + LR +KNL AF +L+C+V F +
Sbjct: 515 FAWEPSFRDQVQNLRKKELKNLLAFSQLQCVVIFVF 550
>U49248-1|AAB09422.1| 1545|Homo sapiens canalicular multispecific
organic anion transporter protein.
Length = 1545
Score = 30.3 bits (65), Expect = 9.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 251 YAETPDLSSSKRKLRNN*VKNLYAFIKLECIVYFKY 358
+A P + LR +KNL AF +L+C+V F +
Sbjct: 515 FAWEPSFRDQVQNLRKKELKNLLAFSQLQCVVIFVF 550
>AL392107-3|CAI11010.1| 1545|Homo sapiens ATP-binding cassette,
sub-family C (CFTR/MRP), member 2 protein.
Length = 1545
Score = 30.3 bits (65), Expect = 9.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 251 YAETPDLSSSKRKLRNN*VKNLYAFIKLECIVYFKY 358
+A P + LR +KNL AF +L+C+V F +
Sbjct: 515 FAWEPSFRDQVQNLRKKELKNLLAFSQLQCVVIFVF 550
>AL133353-7|CAI14502.1| 1545|Homo sapiens ATP-binding cassette,
sub-family C (CFTR/MRP), member 2 protein.
Length = 1545
Score = 30.3 bits (65), Expect = 9.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 251 YAETPDLSSSKRKLRNN*VKNLYAFIKLECIVYFKY 358
+A P + LR +KNL AF +L+C+V F +
Sbjct: 515 FAWEPSFRDQVQNLRKKELKNLLAFSQLQCVVIFVF 550
>AJ132244-1|CAB45309.1| 1545|Homo sapiens multidrug resistance
protein 2 (MRP2) protein.
Length = 1545
Score = 30.3 bits (65), Expect = 9.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 251 YAETPDLSSSKRKLRNN*VKNLYAFIKLECIVYFKY 358
+A P + LR +KNL AF +L+C+V F +
Sbjct: 515 FAWEPSFRDQVQNLRKKELKNLLAFSQLQCVVIFVF 550
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,677,261
Number of Sequences: 237096
Number of extensions: 1765765
Number of successful extensions: 2970
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 2820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2970
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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