Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_D14
(874 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC11C11.09c |rpl502|rpl5-2, rpl5b|60S ribosomal protein L5|Sch... 163 4e-41
SPAC3H5.12c |rpl501|rpl5-1, rpl5|60S ribosomal protein L5|Schizo... 163 4e-41
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo... 28 2.0
SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic... 27 2.6
SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit ... 27 2.6
SPBC25B2.10 |||Usp |Schizosaccharomyces pombe|chr 2|||Manual 27 3.5
SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit ... 27 4.6
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 26 6.1
>SPBC11C11.09c |rpl502|rpl5-2, rpl5b|60S ribosomal protein
L5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 294
Score = 163 bits (395), Expect = 4e-41
Identities = 77/158 (48%), Positives = 101/158 (63%)
Frame = +3
Query: 225 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 404
Q KNKYN PKYRL+VR SN+ VTCQ+ SR+ GD+++ A+S ELPRYG+K GL N+ AA
Sbjct: 39 QAKNKYNAPKYRLVVRFSNRFVTCQIVSSRVNGDYVLAHAHSSELPRYGIKWGLANWTAA 98
Query: 405 YSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGAR 584
Y+TG E +++GP F+ +LDVGL RT+TG+R
Sbjct: 99 YATGLLVARRALAKVGLADKYEGVTEPEGEFELTEAIEDGPRPFKVFLDVGLKRTSTGSR 158
Query: 585 VFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHR 698
VFGAMKGA DGGL +PHS RFPG+D E+++ + E R
Sbjct: 159 VFGAMKGASDGGLFIPHSPNRFPGFDIETEELDDETLR 196
Score = 60.1 bits (139), Expect = 4e-10
Identities = 27/55 (49%), Positives = 38/55 (69%)
Frame = +1
Query: 703 HIFGLHVAEYMRSLEQDDEDXFKRQFSKYIKLGVTADAIEXIYXKAHEXIRADPS 867
+I+G HVAEYM L DDE+ +++QFS I G+ +D +E IY +A+ IR DPS
Sbjct: 198 YIYGGHVAEYMEMLIDDDEERYQKQFSGLIADGIESDQLEDIYAEAYAKIREDPS 252
Score = 36.3 bits (80), Expect = 0.006
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +2
Query: 173 RRREGKTDYYARKRLXCSGQEQ 238
RRREGKTDYYARKRL + +
Sbjct: 22 RRREGKTDYYARKRLIAQAKNK 43
Score = 29.9 bits (64), Expect = 0.49
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 109 MGFVKVVKNKQYFKRYQVKF 168
M F+K VK+ YF RYQ K+
Sbjct: 1 MPFIKAVKSSPYFSRYQTKY 20
>SPAC3H5.12c |rpl501|rpl5-1, rpl5|60S ribosomal protein
L5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 294
Score = 163 bits (395), Expect = 4e-41
Identities = 77/158 (48%), Positives = 101/158 (63%)
Frame = +3
Query: 225 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 404
Q KNKYN PKYRL+VR SN+ VTCQ+ SR+ GD+++ A+S ELPRYG+K GL N+ AA
Sbjct: 39 QAKNKYNAPKYRLVVRFSNRFVTCQIVSSRVNGDYVLAHAHSSELPRYGIKWGLANWTAA 98
Query: 405 YSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGAR 584
Y+TG E +++GP F+ +LDVGL RT+TG+R
Sbjct: 99 YATGLLVARRALAKVGLADKYEGVTEPEGEFELTEAIEDGPRPFKVFLDVGLKRTSTGSR 158
Query: 585 VFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHR 698
VFGAMKGA DGGL +PHS RFPG+D E+++ + E R
Sbjct: 159 VFGAMKGASDGGLFIPHSPNRFPGFDIETEELDDETLR 196
Score = 60.1 bits (139), Expect = 4e-10
Identities = 27/55 (49%), Positives = 38/55 (69%)
Frame = +1
Query: 703 HIFGLHVAEYMRSLEQDDEDXFKRQFSKYIKLGVTADAIEXIYXKAHEXIRADPS 867
+I+G HVAEYM L DDE+ +++QFS I G+ +D +E IY +A+ IR DPS
Sbjct: 198 YIYGGHVAEYMEMLIDDDEERYQKQFSGLIADGIESDQLEDIYAEAYAKIREDPS 252
Score = 36.3 bits (80), Expect = 0.006
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +2
Query: 173 RRREGKTDYYARKRLXCSGQEQ 238
RRREGKTDYYARKRL + +
Sbjct: 22 RRREGKTDYYARKRLIAQAKNK 43
Score = 29.9 bits (64), Expect = 0.49
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 109 MGFVKVVKNKQYFKRYQVKF 168
M F+K VK+ YF RYQ K+
Sbjct: 1 MPFIKAVKSSPYFSRYQTKY 20
>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1826
Score = 27.9 bits (59), Expect = 2.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 44 DLPFFLLGVXSVDATL*LRFKIWDSLKL*RTNNTSRG 154
DLPF+ +G S LR +IW SL+ T+ G
Sbjct: 897 DLPFYCIGFKSTAPEYTLRTRIWASLRSQTLYRTASG 933
>SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic
subunit Bgs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1729
Score = 27.5 bits (58), Expect = 2.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 44 DLPFFLLGVXSVDATL*LRFKIWDSLK 124
DLPF+ +G S LR +IW SL+
Sbjct: 801 DLPFYCVGFKSATPEYTLRTRIWASLR 827
>SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit
Bgs4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1955
Score = 27.5 bits (58), Expect = 2.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 26 YRELP*DLPFFLLGVXSVDATL*LRFKIWDSLK 124
Y+ DLPF+ +G S LR +IW SL+
Sbjct: 977 YKSKVDDLPFYCIGFKSAMPEYTLRTRIWASLR 1009
>SPBC25B2.10 |||Usp |Schizosaccharomyces pombe|chr 2|||Manual
Length = 307
Score = 27.1 bits (57), Expect = 3.5
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -2
Query: 441 EAVFVLIADQLNMLQHNLSDQPSHHNVATHV 349
EAV + + D + L +LSD+ S+ ++A H+
Sbjct: 169 EAVVLRVIDPSSKLAEDLSDEQSYRSLAEHI 199
>SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit
Bgs2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1894
Score = 26.6 bits (56), Expect = 4.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 44 DLPFFLLGVXSVDATL*LRFKIWDSLK 124
DLPF+ +G + LR +IW SL+
Sbjct: 959 DLPFYCIGFKNATPEYTLRTRIWASLR 985
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 26.2 bits (55), Expect = 6.1
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +1
Query: 619 ASMFLIPS--KDSLAMMQNPKSSMLKYTGAHIFGLHVAEYMRSLEQDDEDXFKRQFSKYI 792
+++F+ P K L +QNPKS +F L + Y+ S+ ++ R+F I
Sbjct: 274 STLFVTPLAIKKLLQYLQNPKSDEGNSPFLWVFVLLIGPYLASVVKELYVHVSRRFMLRI 333
Query: 793 KLGVT 807
K +T
Sbjct: 334 KAAIT 338
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,344,499
Number of Sequences: 5004
Number of extensions: 66363
Number of successful extensions: 182
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 180
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 436477420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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