Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_D09
(916 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 38 0.002
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 38 0.002
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 36 0.006
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 36 0.008
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.008
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 35 0.014
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 34 0.032
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 31 0.23
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 30 0.40
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 30 0.53
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 29 0.92
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 29 1.2
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 1.6
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 27 3.7
SPAC26A3.08 |smb1|smb|Sm snRNP core protein Smb1|Schizosaccharom... 26 6.5
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 26 8.6
SPAC17A5.10 |||conserved fungal protein|Schizosaccharomyces pomb... 26 8.6
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 38.3 bits (85), Expect = 0.002
Identities = 29/115 (25%), Positives = 30/115 (26%)
Frame = +2
Query: 569 PPPXGXXGXGPXXGXXXGAPPPPXXPGKXPXPKGAQXPXXXXXXXXXXXXXKXXPPPXRX 748
PP G P APP P G P PK P P P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPK----PSVAAPPVPAPSGAPPVPKPS-- 1165
Query: 749 XXXXXXXXXXXXXXXXXXXXXXXPPPPPPXKXPPXPPPPXXXPXPXPXPXXPPAP 913
PP PPP + PP P P P P PP P
Sbjct: 1166 VAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 38.3 bits (85), Expect = 0.002
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +2
Query: 818 PPPPPPXKXPPXPPPPXXXPXPXPXPXXPPAPP 916
P P P PP PPP P P P PP PP
Sbjct: 1180 PVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Score = 37.5 bits (83), Expect = 0.003
Identities = 29/116 (25%), Positives = 31/116 (26%), Gaps = 1/116 (0%)
Frame = +2
Query: 569 PPPXGXXGXGPXXGXXXGAPPPPXXPGKXPXPKGAQXPXXXXXXXXXXXXXKXXPPPXRX 748
PP G P APP P G P PK + PP +
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPS------VAAPPVPAPSSGIPPVPKP 1184
Query: 749 XXXXXXXXXXXXXXXXXXXXXXXPPPPPPXKXPPXPPPPXXXPX-PXPXPXXPPAP 913
PP PPP PP P P P P P PP P
Sbjct: 1185 AAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240
Score = 36.3 bits (80), Expect = 0.006
Identities = 31/123 (25%), Positives = 32/123 (26%), Gaps = 5/123 (4%)
Frame = +2
Query: 560 PXXPPPXGXXGXG-PXXGXXXGAPPPPXXPGKXPXPK---GAQXPXXXXXXXXXXXXXKX 727
P PPP P GAPP P G P PK A
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSG 1119
Query: 728 XPPPXRXXXXXXXXXXXXXXXXXXXXXXXXPPPPPPXKXPPXPPPP-XXXPXPXPXPXXP 904
PP + PP P P PP P P P P P P
Sbjct: 1120 APPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIP 1179
Query: 905 PAP 913
P P
Sbjct: 1180 PVP 1182
Score = 32.7 bits (71), Expect = 0.075
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 818 PPPPPPXKXPPXPPPPXXXPXPXPXPXXPPAPP 916
PP P P PP P P P P P APP
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPP 1064
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = +3
Query: 681 PXPXPXARKTGXXPKXXPPPXAPPHXXXPPPTPXXPGXGPPXPXXXPP 824
P P P P PP P P P P P P PP
Sbjct: 1113 PVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPP 1160
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 818 PPPPPPXKXPPXPPPPXXXPXPXPXPXXPPAP 913
P P P PP P P P P P PP P
Sbjct: 1023 PVPLPSADAPPIPVPSTAPPVPIP-TSTPPVP 1053
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 38.3 bits (85), Expect = 0.002
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +2
Query: 818 PPPPPPXKXPPXPPPPXXXPXPXPXPXXPPAP 913
PPP P PP PPPP P P PP P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 37.9 bits (84), Expect = 0.002
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +2
Query: 818 PPPPPPXKXPPXPPPPXXXPXPXPXPXXPPAPP 916
PPPPP P P P P P P PP PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP 765
Score = 36.7 bits (81), Expect = 0.005
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 3/51 (5%)
Frame = +3
Query: 681 PXPXPXARKTGXXPKXXPPPXAPPHXXXPPPTPXXP---GXGPPXPXXXPP 824
P P P P P P P PPP P P G GPP P PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 34.7 bits (76), Expect = 0.019
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +2
Query: 821 PPPPPXKXPPXPPPPXXXPXPXPXPXXPPAPP 916
PPP P P PPPP P PP PP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 31.9 bits (69), Expect = 0.13
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = +2
Query: 839 KXPPXPPPP--XXXPXPXPXPXXPPAP 913
K PP PPP P P P P PPAP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAP 756
Score = 30.7 bits (66), Expect = 0.30
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 821 PPPPPXKXPPXPPPPXXXPXPXPXPXXPPAPP 916
P PPP PPPP P PP PP
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 4/36 (11%)
Frame = +2
Query: 821 PPPPPXKXPPXPP----PPXXXPXPXPXPXXPPAPP 916
P P P PP P PP P P PP PP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 560 PXXPPPXGXXGXGPXXGXXXGAPPPPXXP 646
P PPP G G GP PPPP P
Sbjct: 762 PPPPPPPGVAGAGP-------PPPPPPPP 783
Score = 25.8 bits (54), Expect = 8.6
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +3
Query: 681 PXPXPXARKTGXXPKXXPPPXAPPHXXXPPPTPXXPGXG 797
P P P G P PP A PPP P G
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAG 788
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 36.3 bits (80), Expect = 0.006
Identities = 23/54 (42%), Positives = 24/54 (44%)
Frame = -1
Query: 823 GGXXXGXGGPXPGXXGVGGGXXXWGGAXGGGXXFGXXPVFRAXGXGXGXLGPLW 662
GG G GG G G GGG +GG GG FG P G G G GP W
Sbjct: 224 GGFGGGPGGFEGGPGGFGGGPGGFGGGLGG---FGGGPGGFGGGPG-GHGGPGW 273
Score = 35.1 bits (77), Expect = 0.014
Identities = 22/54 (40%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = -1
Query: 823 GGXXXGXGGPXPGXXGVG--GGXXXWGGAXGGGXXFGXXPVFRAXGXGXGXLGP 668
GG G GGP PG G G GG G GG FG P G G GP
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGP 244
Score = 32.3 bits (70), Expect = 0.099
Identities = 17/32 (53%), Positives = 17/32 (53%)
Frame = -2
Query: 915 GGAGGXXGXGXGXGXXXGGGGXGGXLXGGGGG 820
GG GG G G G G GG GG L G GGG
Sbjct: 228 GGPGGFEGGPGGFGG--GPGGFGGGLGGFGGG 257
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 35.9 bits (79), Expect = 0.008
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +2
Query: 830 PPXKXPPXPPPPXXXPXPXPXPXXPP 907
PP PP PPPP P P P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 33.9 bits (74), Expect = 0.032
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2
Query: 818 PPPPPPXKXPPXPPPPXXXP 877
PPPPPP PP PPP P
Sbjct: 11 PPPPPPGFEPPSQPPPPPPP 30
Score = 29.1 bits (62), Expect = 0.92
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 845 PPXPPPPXXXPXPXPXPXXPPAPP 916
PP PPP P P PP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 845 PPXPPPPXXXPXPXPXPXXPPAPP 916
P PPPP P P PP PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 818 PPPPPPXKXPPXPPPPXXXPXPXP 889
P PPP PP PP P P P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 27.5 bits (58), Expect = 2.8
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 765 PPPTPXXPGXGPPXPXXXPP 824
PPP P PG PP PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPP 28
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +3
Query: 720 PKXXPPPXAPPHXXXPPPTPXXP 788
P PPP PP PP P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP 27
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 2/26 (7%)
Frame = +3
Query: 720 PKXXPPPXAPPHXXXP--PPTPXXPG 791
P PPP PP P PP P PG
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 25.8 bits (54), Expect = 8.6
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +3
Query: 711 GXXPKXXPPPXAPPHXXXPPPTP 779
G P PPP P PPP P
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPP 29
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.9 bits (79), Expect = 0.008
Identities = 29/119 (24%), Positives = 30/119 (25%)
Frame = +2
Query: 560 PXXPPPXGXXGXGPXXGXXXGAPPPPXXPGKXPXPKGAQXPXXXXXXXXXXXXXKXXPPP 739
P PPP G G PP P + G Q P PPP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPP---PLSSSRAVSNPPAPPP 393
Query: 740 XRXXXXXXXXXXXXXXXXXXXXXXXXPPPPPPXKXPPXPPPPXXXPXPXPXPXXPPAPP 916
PP PP PP PP P P PP PP
Sbjct: 394 AIPGRSAPALPPLGNASRTSTPPVPTPPSLPP-SAPPSLPPSAPPSLPMGAPAAPPLPP 451
Score = 35.5 bits (78), Expect = 0.011
Identities = 28/118 (23%), Positives = 29/118 (24%)
Frame = +2
Query: 560 PXXPPPXGXXGXGPXXGXXXGAPPPPXXPGKXPXPKGAQXPXXXXXXXXXXXXXKXXPPP 739
P PP G P APPPP P + G Q P P
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPP--PPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Query: 740 XRXXXXXXXXXXXXXXXXXXXXXXXXPPPPPPXKXPPXPPPPXXXPXPXPXPXXPPAP 913
R PP P PP PP P P P AP
Sbjct: 397 GRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAP 454
Score = 33.5 bits (73), Expect = 0.043
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +2
Query: 824 PPPPXKXPPXPPPPXXXPXPXPXPXXPPAPP 916
PP P P PP P P P P PAPP
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Score = 33.5 bits (73), Expect = 0.043
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +2
Query: 824 PPPPXKXPPXPPPPXXXPXPXPXPXXPPAPP 916
PP P P PP P P P P P PA P
Sbjct: 457 PPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 29.1 bits (62), Expect = 0.92
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +2
Query: 818 PPPPPPXKXPPXPPPPXXXPXPXPXPXXPPAP 913
PPPPPP + PP P PP P
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = +2
Query: 818 PPPPPPXKXPPXPP-PPXXXPXPXPXPXXPPAP 913
P PP PP P P P P P PPAP
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +2
Query: 818 PPPPPPXKXPPXPPPPXXXPXPXPXPXXPPAPP 916
PPPPPP PP PP PP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = +2
Query: 818 PPPPP--PXKXPPXPPPPXXXPXPXPXPXXPPA 910
PP PP P PP P P P P P PP+
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIP--PPS 260
Score = 25.8 bits (54), Expect = 8.6
Identities = 13/50 (26%), Positives = 14/50 (28%)
Frame = +3
Query: 672 PXXPXPXPXARKTGXXPKXXPPPXAPPHXXXPPPTPXXPGXGPPXPXXXP 821
P P P + P PP PP P PP P P
Sbjct: 425 PSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Score = 25.8 bits (54), Expect = 8.6
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 818 PPPPPPXKXPPXPPPPXXXPXPXPXPXXPPAP 913
PP P P PP P P P P P AP
Sbjct: 457 PPLPAGMPAAPPLPPAAPAPPPAPAP-APAAP 487
Score = 25.8 bits (54), Expect = 8.6
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Frame = +2
Query: 818 PPPPPPXKXPPXPPP-PXXXPXPXPXPXXPPA 910
P P PP PP P P P P P P A
Sbjct: 458 PLPAGMPAAPPLPPAAPAPPPAPAPAPAAPVA 489
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 35.1 bits (77), Expect = 0.014
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +2
Query: 821 PPPPPXKXPPXPPPPXXXPXPXPXPXXPPAP 913
PPPPP PP PP P P P PP P
Sbjct: 1707 PPPPPMSVPP---PPSAPPMPAGPPSAPPPP 1734
Score = 34.7 bits (76), Expect = 0.019
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 827 PPPXKXPPXPPPPXXXPXPXPXPXXPPAPP 916
PP P PPPP P P P P PP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
Score = 33.1 bits (72), Expect = 0.057
Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 4/36 (11%)
Frame = +2
Query: 818 PPP---PPPXKXPPXPP-PPXXXPXPXPXPXXPPAP 913
PPP PPP PP P PP P P P P P
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 30.7 bits (66), Expect = 0.30
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +3
Query: 720 PKXXPPPXAPPHXXXPPPTPXXPGXGPPXP 809
P PPP + P PP P P PP P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 30.3 bits (65), Expect = 0.40
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +2
Query: 818 PPPPPPXKXPPXPPPPXXXPXPXPXPXXPPAPP 916
PP P PP P P P P P APP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPP 1722
Score = 30.3 bits (65), Expect = 0.40
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 818 PPPPPPXKXPPXPPPPXXXPXPXPXPXXP 904
PPPP PP PP P P P P
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 29.9 bits (64), Expect = 0.53
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +3
Query: 672 PXXPXPXPXARKTGXXPKXXPPPXAPPHXXXPPPTPXXPGXGPPXPXXXPP 824
P P P R P P PP PP P P P P PP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPM-PAGPPSAPP 1732
Score = 29.9 bits (64), Expect = 0.53
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +2
Query: 818 PPPPPPXKXPPXPPPPXXXPXPXPXPXXPPAPP 916
P PP + PP P P P P P PP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPP 1718
Score = 29.1 bits (62), Expect = 0.92
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +3
Query: 681 PXPXPXARKTGXXPKXXPPPXAPPHXXXPPPTPXXPGXGPPXP 809
P P P P P P PP PPP P P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAP-PPPLPASSAPSVPNP 1746
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 732 PPPXAPPHXXXPPPTPXXPGXGPPXPXXXPP 824
PPP APP PP P P P P
Sbjct: 1716 PPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.9 bits (74), Expect = 0.032
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Frame = +3
Query: 732 PPPXAPPHXXXPPPTPXX----PGXGPPXPXXXPP 824
PP APP PPP+P P PP P PP
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPP 173
Score = 33.5 bits (73), Expect = 0.043
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Frame = +3
Query: 672 PXXPXPXPXARKTGXXPKXXPPPXAPPHXXXPPPT-PXXPGXGPPXPXXXPP 824
P P K P PPP P PP+ P P PP P PP
Sbjct: 152 PSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Score = 32.7 bits (71), Expect = 0.075
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 821 PPPPPXKXPPXPPPPXXXPXPXPXPXXPPAP 913
PPP P PP P P P P P AP
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAP 180
Score = 29.1 bits (62), Expect = 0.92
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 6/50 (12%)
Frame = +3
Query: 693 PXARKTGXXPKXXPPPXAP----PHXXXPPPT--PXXPGXGPPXPXXXPP 824
P R G PP AP P PPT P P PP P PP
Sbjct: 110 PKLRHIGKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPP 159
Score = 29.1 bits (62), Expect = 0.92
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
Frame = +2
Query: 824 PPPPXKXPPXP---PPPXXXPXPXPXPXXPPAPP 916
PP P K PP P PPP P P P+ P
Sbjct: 158 PPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLP 191
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = +2
Query: 818 PPPP--PPXKXPPXPPPPXXXPXPXPXPXXPPAPP 916
PP P PP PP P P P P PPA P
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAP-PIPSSLPPPAQP 177
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +2
Query: 824 PPPPXKXPPXPPPPXXXPXPXPXPXXPPAPP 916
PPP P PP P P PP P
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVPPMPPKVP 202
Score = 26.2 bits (55), Expect = 6.5
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 7/39 (17%)
Frame = +2
Query: 818 PPPP-----PPXKXPPXP--PPPXXXPXPXPXPXXPPAP 913
PP P PP PP P PPP P PP P
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIP 168
Score = 25.8 bits (54), Expect = 8.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 818 PPPPPPXKXPPXPPPPXXXPXP 883
P PPPP PP P P P P
Sbjct: 3 PAPPPP---PPAPAPAAAAPAP 21
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 31.1 bits (67), Expect = 0.23
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +2
Query: 818 PPPPPPXKXPPXPPPPXXXPXPXPXPXXPPA 910
PPPPPP P PP P P PPA
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALP-PAGPPA 1911
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 30.3 bits (65), Expect = 0.40
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -2
Query: 915 GGAGGXXGXGXGXGXXXGG--GGXGGXLXGGGGG 820
GG GG G G GG GG GG GG GG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGG 42
Score = 29.5 bits (63), Expect = 0.70
Identities = 16/31 (51%), Positives = 16/31 (51%)
Frame = -1
Query: 823 GGXXXGXGGPXPGXXGVGGGXXXWGGAXGGG 731
GG G GG G G GGG GGA GGG
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGR---GGARGGG 39
Score = 29.5 bits (63), Expect = 0.70
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -2
Query: 915 GGAGGXXGX--GXGXGXXXGGGGXGGXLXGGGGG 820
GG GG G G G G GG G G GG GG
Sbjct: 26 GGFGGGRGGARGGGRGGARGGRGGRGGARGGRGG 59
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/38 (47%), Positives = 18/38 (47%), Gaps = 5/38 (13%)
Frame = -2
Query: 915 GGAGGXXGXGXGXGXXXGGGGXGGXLXG-----GGGGG 817
GG GG G G G G G GG GG G GG GG
Sbjct: 30 GGRGGARGGGRG-GARGGRGGRGGARGGRGGSSGGRGG 66
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = -1
Query: 820 GXXXGXGGPXPGXXGVGGGXXXWGGAXGGGXXFGXXPVFRAXGXGXGXLG 671
G G GG G G GG +GG GG G G G G
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARG 55
Score = 26.2 bits (55), Expect = 6.5
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 823 GGXXXGXGGPXPGXXGVGGGXXXWGGAXGG 734
GG G GG G GG GGA GG
Sbjct: 41 GGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 29.9 bits (64), Expect = 0.53
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +2
Query: 821 PPPPPXKXPPXPPPPXXXPXPXPXPXXPPAPP 916
P PPP + P P P P PPAPP
Sbjct: 49 PLPPPTRRLPRKPLPFRSTSLQPPSSQPPAPP 80
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 29.1 bits (62), Expect = 0.92
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -2
Query: 915 GGAGGXXGXGXGXGXXXGGGGXGGXLXGGGGGG 817
GG GG G G GGG G GG GG
Sbjct: 145 GGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGG 177
Score = 26.2 bits (55), Expect = 6.5
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -2
Query: 915 GGAGGXXGXGXGXGXXXGGGGXGGXLXGGGGGG 817
GG GG G G G GG G GG GG
Sbjct: 138 GGRGGFRG-GRGGSRGGFGGNSRGGFGGGSRGG 169
Score = 26.2 bits (55), Expect = 6.5
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = -2
Query: 915 GGAGGXXGXGXGXGXXXG--GGGXGGXLXGGGGG 820
GG GG G G G G GG GG G GG
Sbjct: 152 GGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGG 185
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -2
Query: 915 GGAGGXXGXGXGXGXXXGGGGXGGXLXGGGGG 820
GG+ G G G G G GG GG G GG
Sbjct: 447 GGSRGGRGGFGGRGGFGGRGGFGGGRGRGRGG 478
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +2
Query: 824 PPPPXKXPPXPPPPXXXPXPXPXPXXPPAPP 916
PPP + P P P P PP PP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 27.1 bits (57), Expect = 3.7
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 818 PPPPPPXKXPPXPPPPXXXPXP 883
PPPPPP PP P P
Sbjct: 238 PPPPPPPTLPPQSTNTSQLPMP 259
Score = 25.8 bits (54), Expect = 8.6
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +3
Query: 732 PPPXAPPHXXXPPPTPXXPGXGPPXPXXXPP 824
PPP P P T PP P PP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 25.4 bits (53), Expect(2) = 1.6
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 845 PPXPPPPXXXPXPXPXPXXPPAPP 916
PP P P P P P PP P
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLP 247
Score = 23.0 bits (47), Expect(2) = 7.5
Identities = 9/23 (39%), Positives = 9/23 (39%)
Frame = +2
Query: 848 PXPPPPXXXPXPXPXPXXPPAPP 916
P PP P P PP PP
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPP 243
Score = 21.0 bits (42), Expect(2) = 1.6
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +2
Query: 818 PPPPPP 835
PPPPPP
Sbjct: 189 PPPPPP 194
Score = 21.0 bits (42), Expect(2) = 7.5
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +2
Query: 818 PPPPPP 835
PPPPPP
Sbjct: 192 PPPPPP 197
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/33 (39%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = +2
Query: 818 PPPPPPXKXPPXPPPPXXXPXPX-PXPXXPPAP 913
P P P + P PP P P P P PP P
Sbjct: 110 PNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLP 142
>SPAC26A3.08 |smb1|smb|Sm snRNP core protein
Smb1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 147
Score = 26.2 bits (55), Expect = 6.5
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 596 GPXXGXXXGAPPPPXXPGKXPXPKG 670
GP G APPPP G+ P G
Sbjct: 119 GPVRGVGYTAPPPPAGFGRGAPPPG 143
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 25.8 bits (54), Expect = 8.6
Identities = 15/47 (31%), Positives = 15/47 (31%), Gaps = 1/47 (2%)
Frame = +3
Query: 687 PXPXARKTGXXPKXXPPPXAPPHXXXPPPTPXXPGXG-PPXPXXXPP 824
P P K G P P PPP PG PP P P
Sbjct: 209 PPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 255
>SPAC17A5.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 224
Score = 25.8 bits (54), Expect = 8.6
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +3
Query: 687 PXPXARKTGXXPKXXPPPXAPPHXXXPPPTPXXPGXGPP 803
P P AR T P P A PPP+ PP
Sbjct: 71 PYPPARPTSQRPNSWQPGNASTMYASPPPSSNYNTAKPP 109
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.311 0.147 0.500
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,682,361
Number of Sequences: 5004
Number of extensions: 23658
Number of successful extensions: 513
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 327
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 464508080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
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