Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_D09
         (916 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       27   0.24 
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    24   2.2  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   2.9  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    22   8.9  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   8.9  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 27.1 bits (57), Expect = 0.24
 Identities = 12/37 (32%), Positives = 14/37 (37%)
 Frame = +3

Query: 693 PXARKTGXXPKXXPPPXAPPHXXXPPPTPXXPGXGPP 803
           P +   G  P     P AP     P P+   P  GPP
Sbjct: 16  PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPP 52



 Score = 23.8 bits (49), Expect = 2.2
 Identities = 12/35 (34%), Positives = 14/35 (40%), Gaps = 5/35 (14%)
 Frame = +2

Query: 821 PPPPPXKXPPXP-----PPPXXXPXPXPXPXXPPA 910
           P P P + P  P     P P   P P   P  PP+
Sbjct: 23  PQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPS 57



 Score = 23.8 bits (49), Expect = 2.2
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +2

Query: 824 PPPPXKXPPXPPPPXXXPXPXP 889
           PP P + PP   PP   P   P
Sbjct: 39  PPNPSQGPPPGGPPGAPPSQNP 60


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 14/33 (42%), Positives = 14/33 (42%)
 Frame = -2

Query: 915 GGAGGXXGXGXGXGXXXGGGGXGGXLXGGGGGG 817
           GG G     G   G   GG    G   GGGGGG
Sbjct: 20  GGPGSSSAGGVVTGAS-GGSIVVGANNGGGGGG 51


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +2

Query: 830 PPXKXPPXPPPPXXXP 877
           PP   PP PPP    P
Sbjct: 338 PPKPAPPPPPPSSSGP 353



 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +2

Query: 818 PPPPPPXKXPP 850
           PPPPPP    P
Sbjct: 343 PPPPPPSSSGP 353


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 11/31 (35%), Positives = 12/31 (38%)
 Frame = +2

Query: 821 PPPPPXKXPPXPPPPXXXPXPXPXPXXPPAP 913
           PP P  +  P   P    P   P P  PP P
Sbjct: 111 PPHPRLRREPEAEPGNNRPVYIPQP-RPPHP 140



 Score = 21.8 bits (44), Expect = 8.9
 Identities = 11/31 (35%), Positives = 12/31 (38%)
 Frame = +2

Query: 821 PPPPPXKXPPXPPPPXXXPXPXPXPXXPPAP 913
           PP P  +  P   P    P   P P  PP P
Sbjct: 137 PPHPRLRREPEAEPGNNRPVYIPQP-RPPHP 166


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -2

Query: 477  PPPPXPXPXXG 445
            PPPP P P  G
Sbjct: 1355 PPPPPPPPSSG 1365


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.311    0.147    0.500 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,514
Number of Sequences: 438
Number of extensions: 6851
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29750994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)