Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_C24
(924 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces po... 43 5e-05
SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase |Schi... 41 3e-04
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 32 0.13
SPAC4D7.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 0.70
SPBC15D4.15 |pho2||4-nitrophenylphosphatase |Schizosaccharomyces... 28 2.1
SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase family|... 27 2.8
SPBPB2B2.05 |||GMP synthase [glutamine-hydrolyzing] |Schizosacch... 26 6.5
SPBC2A9.02 |||NAD dependent epimerase/dehydratase family protein... 26 8.6
SPCC338.15 |||dolichyl-di-phosphooligosaccharide-protein glycotr... 26 8.6
>SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 981
Score = 43.2 bits (97), Expect = 5e-05
Identities = 37/130 (28%), Positives = 58/130 (44%)
Frame = +1
Query: 223 DGKSVFITGATGFLGKAYVEKLAYSCPGIVSIYILIRNKKGSNTEERMRKYLDQPIFSRI 402
+G+ +TGATG+ G+ ++E Y +S+ L+R +ER+ + RI
Sbjct: 643 NGQYFLLTGATGYFGRRFLE---YLVKLNISVVCLVRESSDEAAKERLISLVPS---LRI 696
Query: 403 KYEHPEYFKKIIPISGDITAPKLGLCDEERNILINEVSIVIHSAASVKLNDHLKFTLNTN 582
E+ II + + + GL D + L+ VS + H AA V + N
Sbjct: 697 SSEN------IIVWAAHVEEIRFGLDDAKWEFLVENVSRIYHMAAEVHWMKSYQELRPAN 750
Query: 583 VGGTMKVLEL 612
V GT VLEL
Sbjct: 751 VLGTKTVLEL 760
>SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1419
Score = 40.7 bits (91), Expect = 3e-04
Identities = 35/128 (27%), Positives = 58/128 (45%)
Frame = +1
Query: 229 KSVFITGATGFLGKAYVEKLAYSCPGIVSIYILIRNKKGSNTEERMRKYLDQPIFSRIKY 408
K+VF+TGA G+LG + L + + L+R S+ E +++ D +
Sbjct: 1005 KTVFLTGANGYLGVFILRDLMTRSSNL-KVIALVR---ASSEEHGLKRLKDSCTAYGVWD 1060
Query: 409 EHPEYFKKIIPISGDITAPKLGLCDEERNILINEVSIVIHSAASVKLNDHLKFTLNTNVG 588
E + +KI ++GD+ G+ + + N L V VIH+ A V NV
Sbjct: 1061 E--SWAQKISVVNGDLALENWGIEERKWNKLTEVVDYVIHNGALVHWVYPYSKLRGPNVM 1118
Query: 589 GTMKVLEL 612
GT+ L+L
Sbjct: 1119 GTITALKL 1126
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 31.9 bits (69), Expect = 0.13
Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
Frame = +1
Query: 223 DGKSVFITGATGFLGKAYVEKLAYSCPGIVSIYILIRNKKGSNTEERMRKYLDQPIFSRI 402
DGK++ ITGA+ +GK+ A+ + + +++ ++ S EE ++ + S +
Sbjct: 5 DGKTILITGASSGIGKS----TAFEIAKVAKVKLILAARRFSTVEEIAKELESKYEVSVL 60
Query: 403 KYEHPEYFKKIIPISGDITAPKLGLCDEERNILINEVSIVIHSAASVKLN-DHLKFTLNT 579
+ K IP G I + D + +LIN + + + + LN D + T
Sbjct: 61 PLKLDVSDLKSIP--GVIESLPKEFADID--VLINNAGLALGTDKVIDLNIDDAVTMITT 116
Query: 580 NVGGTMKVLELV 615
NV G M + V
Sbjct: 117 NVLGMMAMTRAV 128
>SPAC4D7.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 600
Score = 29.5 bits (63), Expect = 0.70
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 328 IRNKKGSNTEERMRKYLDQPIFSRIKYEHPEYFKKII 438
+ K SN E+R+ KY+ R +HP++ K++
Sbjct: 393 VHQKLNSNLEKRVEKYIKHSCSQRNVADHPDFALKVV 429
>SPBC15D4.15 |pho2||4-nitrophenylphosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 298
Score = 27.9 bits (59), Expect = 2.1
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +1
Query: 481 DEERNILINEVSIVIHSAASV--KLNDHLKFTLNTNVGGTMKVLELVKEMKNLAVGTLPV 654
DE +I V+ A V +LN ++F N+N+GG++ VL V + + + PV
Sbjct: 223 DEMMEAIIANVNFDRKKACFVGDRLNTDIQFAKNSNLGGSLLVLTGVSKEEEILEKDAPV 282
>SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 336
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 226 GKSVFITGATGFLGKAYVEKL 288
GK V +TG TGF+G E+L
Sbjct: 3 GKLVLVTGVTGFIGAHVAEQL 23
>SPBPB2B2.05 |||GMP synthase [glutamine-hydrolyzing]
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 237
Score = 26.2 bits (55), Expect = 6.5
Identities = 8/22 (36%), Positives = 17/22 (77%)
Frame = -2
Query: 125 QFFLNKTYXRLNQASIVSSLPH 60
Q+F+N++ + Q++I S++PH
Sbjct: 200 QYFINRSKWHMKQSNIFSNVPH 221
>SPBC2A9.02 |||NAD dependent epimerase/dehydratase family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 295
Score = 25.8 bits (54), Expect = 8.6
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 235 VFITGATGFLGKAYVEKL 288
+F+TGA GF+G V +L
Sbjct: 3 IFVTGAAGFIGSEIVRQL 20
>SPCC338.15 |||dolichyl-di-phosphooligosaccharide-protein
glycotransferase subunit |Schizosaccharomyces pombe|chr
3|||Manual
Length = 437
Score = 25.8 bits (54), Expect = 8.6
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = -2
Query: 500 NIFLSSSHNPSLGAVMSPEMGMIFLKYSGCSYFI 399
N+ L SS + SLG V SP+ + F++ SG + F+
Sbjct: 71 NLILLSSQSKSLGPVFSPKSLLEFVQ-SGGNLFV 103
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,800,536
Number of Sequences: 5004
Number of extensions: 83229
Number of successful extensions: 222
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 221
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 467341524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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