Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_C24
         (924 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF098505-1|AAC67415.1|  536|Caenorhabditis elegans Hypothetical ...   133   1e-31
U42835-6|AAA83589.2|  816|Caenorhabditis elegans Dehydrogenases,...    31   0.88 
Z74029-1|CAA98431.1|  293|Caenorhabditis elegans Hypothetical pr...    31   1.2  
U58761-4|AAB00715.1|  631|Caenorhabditis elegans Hypothetical pr...    31   1.2  
U41544-2|AAA83184.1|  436|Caenorhabditis elegans Dehydrogenases,...    31   1.2  
AC084154-10|AAK29873.1| 1140|Caenorhabditis elegans Hypothetical...    29   4.7  
Z78415-6|CAH60758.1|  291|Caenorhabditis elegans Hypothetical pr...    29   6.2  
Z37092-2|CAA85453.1|  555|Caenorhabditis elegans Hypothetical pr...    29   6.2  

>AF098505-1|AAC67415.1|  536|Caenorhabditis elegans Hypothetical
           protein Y71H10A.2 protein.
          Length = 536

 Score =  133 bits (322), Expect = 1e-31
 Identities = 62/145 (42%), Positives = 97/145 (66%)
 Frame = +1

Query: 205 TVSEFYDGKSVFITGATGFLGKAYVEKLAYSCPGIVSIYILIRNKKGSNTEERMRKYLDQ 384
           +V + Y G SV +TG TGFLGK  VEKL ++   I +IY++IR +KG N +ER+   L  
Sbjct: 4   SVRDVYAGSSVLLTGGTGFLGKVIVEKLLWTIDDIQNIYLMIRTRKGKNPQERLSGLLHD 63

Query: 385 PIFSRIKYEHPEYFKKIIPISGDITAPKLGLCDEERNILINEVSIVIHSAASVKLNDHLK 564
           P+F+RI+ E PE F K+  I GD+    LG+  E+  ++ + V++VIHSAA+VK ++HL+
Sbjct: 64  PLFNRIRQEKPEAFDKLKAIGGDMMVENLGMDPEDVMLIRDNVNVVIHSAATVKFDEHLR 123

Query: 565 FTLNTNVGGTMKVLELVKEMKNLAV 639
             +  NV GT ++++L  ++K+L V
Sbjct: 124 AAVTMNVIGTKRIIDLCHQIKDLKV 148


>U42835-6|AAA83589.2|  816|Caenorhabditis elegans Dehydrogenases,
           short chain protein27 protein.
          Length = 816

 Score = 31.5 bits (68), Expect = 0.88
 Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = +1

Query: 241 ITGATGFLGKAYVEKLAYSCPGIVSIYILIRN-KKGSNTEERM 366
           ITG T  +GKAY+E+L     G+   Y++ RN  K +NT++ +
Sbjct: 508 ITGGTDGIGKAYIEELC-KTRGLKKFYLIGRNIDKLNNTKKEL 549


>Z74029-1|CAA98431.1|  293|Caenorhabditis elegans Hypothetical
           protein C45B11.3 protein.
          Length = 293

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +1

Query: 217 FYDGKSVFITGATGFLGKAYVEKLAYSCPGIV 312
           F+ GK+VFITGA+  +GK    KLA     IV
Sbjct: 10  FFAGKTVFITGASRGIGKEIALKLAKDGANIV 41


>U58761-4|AAB00715.1|  631|Caenorhabditis elegans Hypothetical
           protein C01F1.3a protein.
          Length = 631

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +1

Query: 220 YDGKSVFITGATGFLGKAYVEKL--AYSCPGIVSIYILIRNKKGSNTEERMR 369
           Y  K+V ITG  GF+G  +V  +  A+     V+I  LI N    N  E +R
Sbjct: 3   YTPKNVVITGGCGFIGSNFVNYIHDAWPTCNFVNIDKLILNSDTQNVAESVR 54


>U41544-2|AAA83184.1|  436|Caenorhabditis elegans Dehydrogenases,
           short chain protein28 protein.
          Length = 436

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
 Frame = +1

Query: 220 YDGKSVFITGATGFLGKAYVEKLA-YSCPGIVSIYILIRNKKGSNTEERMRKYLDQPIFS 396
           +DGK   +TGA G LGK Y  +LA   C  +V+   L  ++ G+++   M   + Q I S
Sbjct: 5   FDGKVAIVTGAGGGLGKTYALELAKRGCKVVVN--DLGGDRHGTSSSSSMADKVVQEIKS 62

Query: 397 R-----IKYEHPEYFKKIIPISGD 453
                   Y+  E+  KI+  + D
Sbjct: 63  AGGQAVANYDSVEFGDKIVKTAID 86


>AC084154-10|AAK29873.1| 1140|Caenorhabditis elegans Hypothetical
           protein Y22D7AR.2 protein.
          Length = 1140

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
 Frame = +1

Query: 160 ISKMSHNGTLDEHYQTVSEFYDGKSVFITGATGFL-GKAYVEKLAYSCPGIVSIYILIRN 336
           I+K + N TLD   + + + +   S F+ G  GFL G A+++ +      +  +  +IR+
Sbjct: 633 IAKATEN-TLDRFQKKIEKDFGEISTFVNGLQGFLDGFAFLKNI-QGIDSLKPVIEVIRS 690

Query: 337 KKGSNTE 357
            + SNT+
Sbjct: 691 YRDSNTK 697


>Z78415-6|CAH60758.1|  291|Caenorhabditis elegans Hypothetical
           protein C17G1.8 protein.
          Length = 291

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +1

Query: 220 YDGKSVFITGATGFLGKAYVEK-LAYSCPGIVSIYILI 330
           + G ++FI  A G+LG ++  K L YS  G V + IL+
Sbjct: 54  FTGVTIFIIVAVGYLGVSWSNKSLLYSYIGFVILLILV 91


>Z37092-2|CAA85453.1|  555|Caenorhabditis elegans Hypothetical
           protein F44F4.2 protein.
          Length = 555

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -3

Query: 535 RLSESLSTPR*LIYFFLHRTILVWVR*CHQRW 440
           RL   LS    L+Y F++R IL W+     +W
Sbjct: 491 RLQRRLSVSSVLLYLFIYRVILRWIEPYVNKW 522


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,758,659
Number of Sequences: 27780
Number of extensions: 453830
Number of successful extensions: 1160
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1160
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)