Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_C21
         (966 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    26   0.44 
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   5.5  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   9.6  

>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 26.2 bits (55), Expect = 0.44
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +2

Query: 905 PPXPXPPXPPPXPXPP 952
           PP P PP PPP    P
Sbjct: 338 PPKPAPPPPPPSSSGP 353


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 5.5
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +2

Query: 902 GPPXPXPPXPPPXPXP 949
           GPP   PP  PP   P
Sbjct: 45  GPPPGGPPGAPPSQNP 60



 Score = 22.2 bits (45), Expect = 7.2
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = +2

Query: 896 PPGPPXPXPPXPPPXPXP 949
           PP P    PP  PP   P
Sbjct: 39  PPNPSQGPPPGGPPGAPP 56


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 192 PXPFFGXTKXQLYLRXS 142
           P PFFG TK  + ++ S
Sbjct: 39  PVPFFGTTKDLILVKKS 55


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,382
Number of Sequences: 438
Number of extensions: 3053
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31806957
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)