Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_C19
(932 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 38 0.003
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 36 0.006
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.008
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.18
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 30 0.54
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.54
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 1.2
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 28 1.6
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 28 2.2
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 23 3.5
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 3.8
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 26 6.6
SPBC211.03c |||guanyl-nucleotide exchange factor|Schizosaccharom... 26 6.6
SPBP8B7.07c |set6||histone lysine methyltransferase Set6 |Schizo... 26 8.7
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 37.5 bits (83), Expect = 0.003
Identities = 25/83 (30%), Positives = 25/83 (30%), Gaps = 2/83 (2%)
Frame = +2
Query: 677 PPXXPXXXPPPXXXXPPXXXPXXPXXPXXXP--XPPXPPXXPPPPXXXXXXXXXPXXPXX 850
PP P P PP P P P P PP P PP P P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIP-SSLPPPAQPAAP-V 181
Query: 851 XXXXXXXXXPPXXPPPPPXXPXP 919
P PP PP P P
Sbjct: 182 KSPPSAPSLPSAVPPMPPKVPPP 204
Score = 33.5 bits (73), Expect = 0.044
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +2
Query: 677 PPXXPXXXPPPXXXXPPXXXPXXPXXPXXXPXPPXPPXXPPPP 805
PP PP P P P P P P PP PPPP
Sbjct: 165 PPIPSSLPPPAQPAAPVKSPPSAPSLPSAVP--PMPPKVPPPP 205
Score = 30.3 bits (65), Expect = 0.41
Identities = 20/71 (28%), Positives = 20/71 (28%)
Frame = +2
Query: 689 PXXXPPPXXXXPPXXXPXXPXXPXXXPXPPXPPXXPPPPXXXXXXXXXPXXPXXXXXXXX 868
P PP PP P PP P PPP P P
Sbjct: 140 PTSAPPRPSIPPP---SPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAP--SLPSAV 194
Query: 869 XXXPPXXPPPP 901
PP PPPP
Sbjct: 195 PPMPPKVPPPP 205
Score = 27.1 bits (57), Expect = 3.8
Identities = 19/84 (22%), Positives = 19/84 (22%)
Frame = +1
Query: 643 PXXXPXXXXXXXPXXPPXXXXPXXXXXPXXXPXXPPXXXXXPXPXXXXXXPXPXXXXXXX 822
P P PP P P PP P P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPP--IPSSLPPPAQPAAPV 181
Query: 823 XXXPXXPXXXPXXPXXPPPXPXPP 894
P P P PP P PP
Sbjct: 182 KSPPSAPSLPSAVPPMPPKVPPPP 205
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 36.3 bits (80), Expect = 0.006
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Frame = +2
Query: 677 PPXXPXXXPPPXXXXPPXXXPXX--PXXPXXXPXPPXPPXXPPPP 805
PP P PP P P P P P P PP PPPP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 34.3 bits (75), Expect = 0.025
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 689 PXXXPPPXXXXPPXXXPXXPXXPXXXPXPPXPPXXPP 799
P PPP PP P P P P PP P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 29.5 bits (63), Expect = 0.71
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +2
Query: 677 PPXXPXXXPPPXXXXPPXXXPXXPXXPXXXPXPPXPPXXPPP 802
PP PPP PP P P P PP P P P
Sbjct: 1699 PPQMSAPTPPP----PPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +1
Query: 841 PXXXPXXPXXPPPXPXPPPPXXXXPXXP 924
P P P PP P PP P P P
Sbjct: 1717 PPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.9 bits (79), Expect = 0.008
Identities = 19/73 (26%), Positives = 19/73 (26%)
Frame = +1
Query: 706 PXXXXXPXXXPXXPPXXXXXPXPXXXXXXPXPXXXXXXXXXXPXXPXXXPXXPXXPPPXP 885
P P P PP P P P P P P PP P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 886 XPPPPXXXXPXXP 924
PPP P P
Sbjct: 475 APPPAPAPAPAAP 487
Score = 33.9 bits (74), Expect = 0.033
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +2
Query: 677 PPXXPXXXPPPXXXXPPXXXPXXPXXPXXXPXPPXPPXXPPPP 805
PP P PP P P P P P P P PP P
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLP 470
Score = 33.1 bits (72), Expect = 0.058
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Frame = +2
Query: 677 PPXXPXXXP--PPXXXXPPXXXPXXPXXPXXXPXPPXPPXXPPPP 805
PP P P PP P P P P PP P PP P
Sbjct: 436 PPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 31.1 bits (67), Expect = 0.23
Identities = 17/57 (29%), Positives = 17/57 (29%), Gaps = 1/57 (1%)
Frame = +2
Query: 677 PPXXPXXXPPPXXXXPPXXXPXXPXXPXXXP-XPPXPPXXPPPPXXXXXXXXXPXXP 844
PP P PP P P P P P PP P P P P P
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 29.5 bits (63), Expect = 0.71
Identities = 21/87 (24%), Positives = 21/87 (24%), Gaps = 4/87 (4%)
Frame = +2
Query: 677 PPXXPXXXPPPXXXXPPXXXPXXPXXPXXXPXPPXPP----XXPPPPXXXXXXXXXPXXP 844
PP P P P P PP P PP P P
Sbjct: 392 PPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPP 451
Query: 845 XXXXXXXXXXXPPXXPPPPPXXPXPXP 925
P PP PP P P P
Sbjct: 452 SAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 29.5 bits (63), Expect = 0.71
Identities = 25/83 (30%), Positives = 25/83 (30%)
Frame = +2
Query: 677 PPXXPXXXPPPXXXXPPXXXPXXPXXPXXXPXPPXPPXXPPPPXXXXXXXXXPXXPXXXX 856
PP P PP PP P P P PP P P P P
Sbjct: 420 PPSLPPSAPPSL---PPSAPPSLPMGA-----PAAPPLPPSAPIAPPLPAGMPAAP---- 467
Query: 857 XXXXXXXPPXXPPPPPXXPXPXP 925
PP P PPP P P P
Sbjct: 468 -----PLPPAAPAPPP-APAPAP 484
Score = 26.6 bits (56), Expect = 5.0
Identities = 17/66 (25%), Positives = 17/66 (25%)
Frame = +2
Query: 722 PPXXXPXXPXXPXXXPXPPXPPXXPPPPXXXXXXXXXPXXPXXXXXXXXXXXPPXXPPPP 901
PP P P PP PPPP P PP PP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTG-RQPPPLSSSRAVSNPPAPPPAI 395
Query: 902 PXXPXP 919
P P
Sbjct: 396 PGRSAP 401
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.5 bits (68), Expect = 0.18
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +1
Query: 736 PXXPPXXXXXPXPXXXXXXPXPXXXXXXXXXXPXXPXXXPXXPXXPPPXPXPPPP 900
P PP P P P P P P P PP P PPPP
Sbjct: 732 PPPPPPAVIVPTPAPA---PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 31.1 bits (67), Expect = 0.23
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +2
Query: 701 PPPXXXXPPXXXPXXPXXPXXXPXPPXPPXXPPPPXXXXXXXXXPXXP 844
PPP P P P P PP PPPP P P
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 29.1 bits (62), Expect = 0.94
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +2
Query: 677 PPXXPXXXPPPXXXXPPXXXPXXPXXPXXXPXPPXPPXXPPPP 805
P P PPP P P P P PP PPPP
Sbjct: 744 PAPAPIPVPPPA---PIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/41 (34%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Frame = +2
Query: 689 PXXXPPPXXXXPPXXXPXXPXXPXXXP--XPPXPPXXPPPP 805
P P P PP P P P PP PPPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/46 (32%), Positives = 15/46 (32%), Gaps = 3/46 (6%)
Frame = +2
Query: 677 PPXXPXXXPPPXXXXPPXXXPXXPXXPXXXPXPPXPPX---XPPPP 805
PP P P P P P P PP P PPPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 26.6 bits (56), Expect = 5.0
Identities = 17/54 (31%), Positives = 17/54 (31%), Gaps = 6/54 (11%)
Frame = +2
Query: 782 PPXXPPPPXXXXXXXXXPXXPXXXXXXXXXXXPPXXPPP------PPXXPXPXP 925
PP PPPP P PP PPP PP P P P
Sbjct: 732 PP--PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 29.9 bits (64), Expect = 0.54
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 801 GGGXXGGXGGXGXXXGXXGXXGXXXGGXXXXGG 703
GGG GG GG G G G G G GG
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFGGGRGRGRGG 478
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.9 bits (64), Expect = 0.54
Identities = 19/82 (23%), Positives = 19/82 (23%)
Frame = +2
Query: 680 PXXPXXXPPPXXXXPPXXXPXXPXXPXXXPXPPXPPXXPPPPXXXXXXXXXPXXPXXXXX 859
P P P P P P P P P PP P P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPV 1142
Query: 860 XXXXXXPPXXPPPPPXXPXPXP 925
P P P P P P
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKP 1164
Score = 28.7 bits (61), Expect = 1.2
Identities = 22/88 (25%), Positives = 22/88 (25%), Gaps = 6/88 (6%)
Frame = +2
Query: 680 PXXPXXXPPPXXXXPPXXXPXXPXXPXXXPXPPXPPXXPP---PPXXXXXXXXXPXXP-- 844
P P P PP P P P PP PP PP P P
Sbjct: 1155 PSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPS 1214
Query: 845 -XXXXXXXXXXXPPXXPPPPPXXPXPXP 925
PP P P P P
Sbjct: 1215 TAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 27.5 bits (58), Expect = 2.9
Identities = 22/85 (25%), Positives = 22/85 (25%), Gaps = 2/85 (2%)
Frame = +2
Query: 677 PPXXPXXXPPPXXXXPPXXXPXXPXXPXXXPXPPXPPXXPP-PPXXXXXXXXXPXXPXXX 853
PP P P P P P P P P PP P P P
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPV-PSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPS 1070
Query: 854 XXXXXXXXPPXXPP-PPPXXPXPXP 925
P PP P P P P
Sbjct: 1071 SEIPSIPAPSGAPPVPAPSGIPPVP 1095
Score = 27.1 bits (57), Expect = 3.8
Identities = 20/86 (23%), Positives = 20/86 (23%), Gaps = 4/86 (4%)
Frame = +2
Query: 680 PXXPXXXPPPXXXXP----PXXXPXXPXXPXXXPXPPXPPXXPPPPXXXXXXXXXPXXPX 847
P P P P P P P P P P PP P P
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSG 1119
Query: 848 XXXXXXXXXXPPXXPPPPPXXPXPXP 925
P P P P P P
Sbjct: 1120 APPVPKPSVAAPPVPVPSGAPPVPKP 1145
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/55 (25%), Positives = 14/55 (25%)
Frame = +1
Query: 736 PXXPPXXXXXPXPXXXXXXPXPXXXXXXXXXXPXXPXXXPXXPXXPPPXPXPPPP 900
P P P P P P P P P P P PP P
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVP 1086
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/64 (26%), Positives = 17/64 (26%)
Frame = +2
Query: 722 PPXXXPXXPXXPXXXPXPPXPPXXPPPPXXXXXXXXXPXXPXXXXXXXXXXXPPXXPPPP 901
PP P P P PP PP PP PP P P
Sbjct: 224 PPTYTPKQAD-PLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQP 282
Query: 902 PXXP 913
P P
Sbjct: 283 PRPP 286
Score = 28.3 bits (60), Expect = 1.6
Identities = 20/81 (24%), Positives = 20/81 (24%), Gaps = 10/81 (12%)
Frame = +2
Query: 701 PPPXXXXPPXXXPXXPXXPXXXPXPPXPP----------XXPPPPXXXXXXXXXPXXPXX 850
PPP P P P PP PP P P P
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPT 226
Query: 851 XXXXXXXXXPPXXPPPPPXXP 913
P PPPPP P
Sbjct: 227 YTPKQADPLPAPPPPPPPTLP 247
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -3
Query: 843 GXXGXXXXXXXXXGGGGXXGGXGGXGXXXGXXGXXGXXXGGXXXXGGGXXXGXXGG 676
G G GGG GG G G G G GG GG G GG
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG-RGGAKGG 70
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 27.9 bits (59), Expect = 2.2
Identities = 20/80 (25%), Positives = 20/80 (25%), Gaps = 7/80 (8%)
Frame = +2
Query: 701 PPPXXXXPPXXXPXXPXXPXXXPXPPXPPXX-------PPPPXXXXXXXXXPXXPXXXXX 859
PPP P P P P PP PPPP P P
Sbjct: 209 PPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 268
Query: 860 XXXXXXPPXXPPPPPXXPXP 919
PP P P P
Sbjct: 269 GEHMPPPPMHHEPGEHMPPP 288
Score = 27.9 bits (59), Expect = 2.2
Identities = 20/80 (25%), Positives = 20/80 (25%), Gaps = 7/80 (8%)
Frame = +2
Query: 701 PPPXXXXPPXXXPXXPXXPXXXPXPPXPPXX-------PPPPXXXXXXXXXPXXPXXXXX 859
PPP P P P P PP PPPP P P
Sbjct: 222 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 281
Query: 860 XXXXXXPPXXPPPPPXXPXP 919
PP P P P
Sbjct: 282 GEHMPPPPMHHEPGEHMPPP 301
Score = 27.9 bits (59), Expect = 2.2
Identities = 20/80 (25%), Positives = 20/80 (25%), Gaps = 7/80 (8%)
Frame = +2
Query: 701 PPPXXXXPPXXXPXXPXXPXXXPXPPXPPXX-------PPPPXXXXXXXXXPXXPXXXXX 859
PPP P P P P PP PPPP P P
Sbjct: 235 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 294
Query: 860 XXXXXXPPXXPPPPPXXPXP 919
PP P P P
Sbjct: 295 GEHMPPPPMHHEPGEHMPPP 314
Score = 27.9 bits (59), Expect = 2.2
Identities = 20/80 (25%), Positives = 20/80 (25%), Gaps = 7/80 (8%)
Frame = +2
Query: 701 PPPXXXXPPXXXPXXPXXPXXXPXPPXPPXX-------PPPPXXXXXXXXXPXXPXXXXX 859
PPP P P P P PP PPPP P P
Sbjct: 248 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 307
Query: 860 XXXXXXPPXXPPPPPXXPXP 919
PP P P P
Sbjct: 308 GEHMPPPPMHHEPGEHMPPP 327
Score = 27.9 bits (59), Expect = 2.2
Identities = 20/80 (25%), Positives = 20/80 (25%), Gaps = 7/80 (8%)
Frame = +2
Query: 701 PPPXXXXPPXXXPXXPXXPXXXPXPPXPPXX-------PPPPXXXXXXXXXPXXPXXXXX 859
PPP P P P P PP PPPP P P
Sbjct: 261 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 320
Query: 860 XXXXXXPPXXPPPPPXXPXP 919
PP P P P
Sbjct: 321 GEHMPPPPMHHEPGEHMPPP 340
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 23.0 bits (47), Expect(2) = 3.5
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 878 PPXXPPPPP 904
PP PPPPP
Sbjct: 945 PPPPPPPPP 953
Score = 22.2 bits (45), Expect(2) = 3.5
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +2
Query: 773 PPXPPXXPPPP 805
P PP PPPP
Sbjct: 942 PAFPPPPPPPP 952
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 722 PPXXXPXXPXXPXXXPXPPXPPXXPPPP 805
PP P P P P PP PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPP--PPPP 30
Score = 27.1 bits (57), Expect = 3.8
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 832 PXXPXXXPXXPXXPPPXPXPPPP 900
P P P P PP PPPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPP 28
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 677 PPXXPXXXPPPXXXXPPXXXPXXP 748
PP P PPP PP P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -1
Query: 914 GXXXXGGGGXGXGGGXXGXXGXXXGXXG 831
G GGG G GGG G G G G
Sbjct: 236 GPGGFGGGPGGFGGGLGGFGGGPGGFGG 263
>SPBC211.03c |||guanyl-nucleotide exchange factor|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1462
Score = 26.2 bits (55), Expect = 6.6
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +1
Query: 217 YRNQRPVCGTDGKTYNNECLLDC 285
Y N P C TD + + C +DC
Sbjct: 955 YANDEPPCPTDEEIQHTLCTIDC 977
>SPBP8B7.07c |set6||histone lysine methyltransferase Set6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 56 F*SFVDIXLSHSASQKELGLKKIYINSQC 142
F S++DI L S QK+L LKK + + C
Sbjct: 224 FISYIDIRLPKSIRQKQL-LKKYFFSCYC 251
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,010,319
Number of Sequences: 5004
Number of extensions: 38503
Number of successful extensions: 330
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 204
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 473333082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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