Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_C18
(930 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 33 0.38
AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical... 32 0.67
Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical pr... 31 1.2
DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-t... 31 1.2
AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-t... 31 1.2
AF045640-7|AAU05589.1| 978|Caenorhabditis elegans Novel channel... 31 1.2
AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel... 31 1.2
AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel... 31 1.2
AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel... 31 1.2
Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical pr... 30 2.1
DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated... 30 2.1
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 29 4.7
U64852-2|ABH03524.1| 975|Caenorhabditis elegans Uncoordinated p... 29 6.3
U64852-1|AAB04966.2| 1041|Caenorhabditis elegans Uncoordinated p... 29 6.3
U58756-9|AAC48086.1| 667|Caenorhabditis elegans Hypothetical pr... 29 6.3
AF338767-1|AAL15621.1| 1041|Caenorhabditis elegans UNC-83 protein. 29 6.3
Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical pr... 28 8.3
U64858-3|AAN84865.1| 1250|Caenorhabditis elegans Roller: helical... 28 8.3
U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helical... 28 8.3
U40412-1|AAA81395.1| 570|Caenorhabditis elegans Temporarily ass... 28 8.3
U39854-2|AAA81077.2| 703|Caenorhabditis elegans Puf (pumilio/fb... 28 8.3
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 32.7 bits (71), Expect = 0.38
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +1
Query: 502 PKTKPARKSPGSLPPCWKTTE--FTSRSCPPRTNST 603
PKT+P P ++P CW+ F PPR N+T
Sbjct: 418 PKTEPPTTEPPNIPYCWQQQSRLFAPSPPPPRVNNT 453
>AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical
protein Y71H2B.1 protein.
Length = 143
Score = 31.9 bits (69), Expect = 0.67
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 192 LYMSVVIGEYETAIA-KCSEYLKEKKGEVIKEAVKRLIE 305
LYM +G+Y+ A KC +Y K+ G+ EA++ I+
Sbjct: 87 LYMQATVGDYDGNTALKCGQYWKKHSGKTQIEAIREYIK 125
>Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical
protein C08H9.11 protein.
Length = 459
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +3
Query: 246 EYLKEKKGEVIKEA-VKRLIENGKRNTMDFAYQLWTKDGKEIVKSY--FPIQFRVIFTEQ 416
EY + E + VK ++ K+N +D WT+ E +KSY F + R FTE
Sbjct: 187 EYSRLVSNETSRNVFVKSIVSFFKKNDIDGIEIFWTRPKYEDIKSYSSFIQELRSAFTE- 245
Query: 417 TVKLINKRDHHALKLI 464
K N+++ + + LI
Sbjct: 246 LQKRWNRKNEYIISLI 261
>DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1797
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -2
Query: 710 SYMEGSRYQWCLKVSAVLSPVDDTVITRTFRVIEL 606
SY+E R +W LK++ +S + TV T R IEL
Sbjct: 43 SYVESDRVEWALKIACTISMI--TVCIHTPRTIEL 75
>AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1831
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -2
Query: 710 SYMEGSRYQWCLKVSAVLSPVDDTVITRTFRVIEL 606
SY+E R +W LK++ +S + TV T R IEL
Sbjct: 43 SYVESDRVEWALKIACTISMI--TVCIHTPRTIEL 75
>AF045640-7|AAU05589.1| 978|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
b protein.
Length = 978
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -2
Query: 710 SYMEGSRYQWCLKVSAVLSPVDDTVITRTFRVIEL 606
SY+E R +W LK++ +S + TV T R IEL
Sbjct: 101 SYVESDRVEWALKIACTISMI--TVCIHTPRTIEL 133
>AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
a protein.
Length = 1562
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -2
Query: 710 SYMEGSRYQWCLKVSAVLSPVDDTVITRTFRVIEL 606
SY+E R +W LK++ +S + TV T R IEL
Sbjct: 101 SYVESDRVEWALKIACTISMI--TVCIHTPRTIEL 133
>AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
c protein.
Length = 1913
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -2
Query: 710 SYMEGSRYQWCLKVSAVLSPVDDTVITRTFRVIEL 606
SY+E R +W LK++ +S + TV T R IEL
Sbjct: 101 SYVESDRVEWALKIACTISMI--TVCIHTPRTIEL 133
>AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
d protein.
Length = 1861
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -2
Query: 710 SYMEGSRYQWCLKVSAVLSPVDDTVITRTFRVIEL 606
SY+E R +W LK++ +S + TV T R IEL
Sbjct: 73 SYVESDRVEWALKIACTISMI--TVCIHTPRTIEL 105
>Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical
protein C45B11.1a protein.
Length = 522
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = -3
Query: 283 SLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTAR 122
++I P SFRY+ L ++ SPM ++ S S S+ V + ++ H+ R
Sbjct: 76 TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFR 129
>DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated
kinase PAK-2 protein.
Length = 522
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = -3
Query: 283 SLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTAR 122
++I P SFRY+ L ++ SPM ++ S S S+ V + ++ H+ R
Sbjct: 76 TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFR 129
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -2
Query: 278 DNLSLLFLQIFRAFGDSGLVFTNDDTHIQLLRQYVISSWCKCGVRSQRTHGEDEG 114
DN + + Q FR+ G S + + + ISSW +C + GEDEG
Sbjct: 795 DNFTCMCAQGFRSEGRSCVSECKPNDFVCTKTYKCISSWWRCDGQDDCGDGEDEG 849
>U64852-2|ABH03524.1| 975|Caenorhabditis elegans Uncoordinated
protein 83, isoform b protein.
Length = 975
Score = 28.7 bits (61), Expect = 6.3
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +1
Query: 619 RKVLVMTVSSTGDSTADTFKHHWYLEPSMYESDVMFFVYNREYNSVM----TLDEDMAAN 786
R V +T S T +S AD H E + E D + EY S+M T+D +++
Sbjct: 190 RTVGHLTASDTEESEADEEDRHSQTETVVTEDDNVLPFAENEYESIMDGRVTVDSCTSSS 249
Query: 787 EDR 795
ED+
Sbjct: 250 EDQ 252
>U64852-1|AAB04966.2| 1041|Caenorhabditis elegans Uncoordinated
protein 83, isoform a protein.
Length = 1041
Score = 28.7 bits (61), Expect = 6.3
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +1
Query: 619 RKVLVMTVSSTGDSTADTFKHHWYLEPSMYESDVMFFVYNREYNSVM----TLDEDMAAN 786
R V +T S T +S AD H E + E D + EY S+M T+D +++
Sbjct: 256 RTVGHLTASDTEESEADEEDRHSQTETVVTEDDNVLPFAENEYESIMDGRVTVDSCTSSS 315
Query: 787 EDR 795
ED+
Sbjct: 316 EDQ 318
>U58756-9|AAC48086.1| 667|Caenorhabditis elegans Hypothetical
protein F58F9.7 protein.
Length = 667
Score = 28.7 bits (61), Expect = 6.3
Identities = 28/109 (25%), Positives = 42/109 (38%), Gaps = 1/109 (0%)
Frame = -2
Query: 716 SLSYMEGSRYQWCLKVSAVLSPVDDTVITRTF-RVIELQVLFVLGGHDLEVNSVVFQHGG 540
S++Y E + W V L ++D + +V+ L LF+L H + + GG
Sbjct: 530 SVAYTEHTMIHW---VQQFLKEIEDQSVKPVLQKVLNLFSLFLLERHLATLYITGYASGG 586
Query: 539 KLPGDFLAGFVFGVTECNFVVVLLVDQLEGVMVPFVYELDSLLGEDHSK 393
K D V E + LVD + P + L S LG K
Sbjct: 587 KFGEDLREKLRLAVAELKPEAIALVDSI----APDDFILHSALGASDGK 631
>AF338767-1|AAL15621.1| 1041|Caenorhabditis elegans UNC-83 protein.
Length = 1041
Score = 28.7 bits (61), Expect = 6.3
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +1
Query: 619 RKVLVMTVSSTGDSTADTFKHHWYLEPSMYESDVMFFVYNREYNSVM----TLDEDMAAN 786
R V +T S T +S AD H E + E D + EY S+M T+D +++
Sbjct: 256 RTVGHLTASDTEESEADEEDRHSQTETVVTEDDNVLPFAENEYESIMDGRVTVDSCTSSS 315
Query: 787 EDR 795
ED+
Sbjct: 316 EDQ 318
>Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical
protein K11H3.3 protein.
Length = 312
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 270 EVIKEAVKRLIENGKRNTMDFAYQLWTKDG 359
+V+K ++ L +NT+D A Q+W K+G
Sbjct: 242 DVVKTRMQGLEAKKYKNTLDCAMQIWKKEG 271
>U64858-3|AAN84865.1| 1250|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 3, isoform b
protein.
Length = 1250
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Frame = +3
Query: 399 VIFTEQTVKLIN-----KRDHHALKLIDQQNHNKIAFGDSK---DKTSKKVSWKFTPVLE 554
++ T++ +K++N +R H L L +KI F D D + + W +P LE
Sbjct: 911 IVQTDKKLKVVNVATELERVDHILPLRYATISHKIEFSDEIKFIDGSKTNLQWTLSPPLE 970
Query: 555 NNRVYFKIMSTEDK 596
V FK+ +K
Sbjct: 971 AGTVLFKVSIFREK 984
>U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 3, isoform a
protein.
Length = 2456
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Frame = +3
Query: 399 VIFTEQTVKLIN-----KRDHHALKLIDQQNHNKIAFGDSK---DKTSKKVSWKFTPVLE 554
++ T++ +K++N +R H L L +KI F D D + + W +P LE
Sbjct: 911 IVQTDKKLKVVNVATELERVDHILPLRYATISHKIEFSDEIKFIDGSKTNLQWTLSPPLE 970
Query: 555 NNRVYFKIMSTEDK 596
V FK+ +K
Sbjct: 971 AGTVLFKVSIFREK 984
>U40412-1|AAA81395.1| 570|Caenorhabditis elegans Temporarily
assigned gene nameprotein 257 protein.
Length = 570
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/65 (24%), Positives = 28/65 (43%)
Frame = +1
Query: 493 SVTPKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTGDSTADT 672
+ TP+ SP +P ++ + ++ PPR +T S V VS DS+ +
Sbjct: 379 NTTPRPGHPSTSPKLVPKTHRSNQQQEKNAPPRPPTTASPRAAPVATFKVSWPTDSSQND 438
Query: 673 FKHHW 687
+ W
Sbjct: 439 SANDW 443
>U39854-2|AAA81077.2| 703|Caenorhabditis elegans Puf (pumilio/fbf)
domain-containingprotein 9 protein.
Length = 703
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +3
Query: 186 EQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKE 365
E+ Y ++GE E + KC +K++ G ++++IE + + F +TK+ +
Sbjct: 440 EEKYQHEILGEMEGQVLKC---VKDQNG---NHVIQKVIERVEPERLQFIIDAFTKNNSD 493
Query: 366 IV--KSYFPIQFRVI 404
V S P RVI
Sbjct: 494 NVYTLSVHPYGCRVI 508
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,315,034
Number of Sequences: 27780
Number of extensions: 439128
Number of successful extensions: 1638
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1638
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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