Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_C16
         (987 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    32   0.81 
12_02_0299 - 17051570-17052474,17053542-17053755                       29   7.5  
01_01_0070 - 542603-542686,542803-543441                               29   7.5  
11_07_0007 - 27262229-27262638,27263252-27263312                       28   10.0 
09_02_0274 + 6611555-6611615,6612229-6612638                           28   10.0 
08_01_0059 - 394001-394708                                             28   10.0 
03_06_0149 - 31987183-31987630,31987813-31987874                       28   10.0 
01_01_0623 + 4672581-4673413,4674274-4674389,4674694-4674902,467...    28   10.0 

>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 31.9 bits (69), Expect = 0.81
 Identities = 14/38 (36%), Positives = 16/38 (42%)
 Frame = +2

Query: 872 PPRSXRPXXLIPXTHPX*XPXPVXPXXXXPWXPPPGXP 985
           PP    P  L+P   P   P P+ P    P  PPP  P
Sbjct: 589 PPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPPP 626


>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
 Frame = +2

Query: 872 PPRSXRPXXLIPXTHPX*XPXPVXPX--XXXPWXPPPGXP 985
           PP    P   IP   P   P P  P      PW PPP  P
Sbjct: 237 PPFLPFPLPPIPFLTPPSPPPPAFPFPLPPWPWAPPPAFP 276


>01_01_0070 - 542603-542686,542803-543441
          Length = 240

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 18/47 (38%), Positives = 20/47 (42%)
 Frame = +2

Query: 845 APXWACVHEPPRSXRPXXLIPXTHPX*XPXPVXPXXXXPWXPPPGXP 985
           AP  A V  PP + +     P T P   P PV P    P  PPP  P
Sbjct: 74  APAVAPVTPPPPTPKKAPPPPVTPPPVTPPPVTP---PPVSPPPATP 117


>11_07_0007 - 27262229-27262638,27263252-27263312
          Length = 156

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 15/47 (31%), Positives = 19/47 (40%)
 Frame = -1

Query: 984 G*PGGGXXGXXXWGXTGXGXQXGWVXGIRXXGRXERGGSCTQAQXGA 844
           G PGGG  G    G +  G + G   G    G   RGG  +    G+
Sbjct: 79  GAPGGGCGGAGHGGGSAGGGRGGGAGGSHRGGGGGRGGGLSGRGHGS 125


>09_02_0274 + 6611555-6611615,6612229-6612638
          Length = 156

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 15/47 (31%), Positives = 19/47 (40%)
 Frame = -1

Query: 984 G*PGGGXXGXXXWGXTGXGXQXGWVXGIRXXGRXERGGSCTQAQXGA 844
           G PGGG  G    G +  G + G   G    G   RGG  +    G+
Sbjct: 79  GAPGGGCGGAGHGGGSAGGGRGGGAGGSHRGGGGGRGGGLSGRGHGS 125


>08_01_0059 - 394001-394708
          Length = 235

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = +2

Query: 872 PPRSXRPXXLIPXTHPX*XPXP-VXPXXXXPWXPPPGXP 985
           PP + RP    P +HP   P P + P    P  PPP  P
Sbjct: 36  PPPTPRPYAPPPPSHPLAPPPPHISPPAPVP--PPPSPP 72


>03_06_0149 - 31987183-31987630,31987813-31987874
          Length = 169

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 807 AMRKRHASRREKGGQVSGKRQGRNRRAHEGASRG 706
           A+ + H   R +   +  +R+GR R AHEG   G
Sbjct: 76  AVARGHGLERLQEAGIEAERRGRRRNAHEGIKIG 109


>01_01_0623 + 4672581-4673413,4674274-4674389,4674694-4674902,
            4675953-4676072,4676185-4676313,4676394-4676442,
            4676899-4676970,4677574-4677707,4677798-4677915,
            4678332-4678541,4678630-4678942,4679539-4679632,
            4679854-4679962,4680243-4680514,4680597-4680724,
            4680832-4681066,4681570-4681758,4681845-4682128,
            4682218-4682398,4682486-4682728,4682904-4682986,
            4683119-4683227,4687996-4688091,4688675-4688764,
            4688881-4689129,4689233-4689412,4690179-4690250,
            4691385-4691474,4691605-4691705,4691794-4691959
          Length = 1757

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 15/55 (27%), Positives = 21/55 (38%)
 Frame = +3

Query: 552  CEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPWK 716
            C Q  S+    V    CW   + S  L    KI A  + G+ +  Y  +    WK
Sbjct: 1564 CVQTLSEHKAAVTSVLCWDEKLLSCSLDKTVKIWAASKSGDLQVIYTHSEEHGWK 1618


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,200,433
Number of Sequences: 37544
Number of extensions: 337449
Number of successful extensions: 1075
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1065
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2881826040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)