Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_C15
         (1063 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    33   0.34 
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    33   0.34 
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    33   0.34 
Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical pr...    28   9.8  
Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical pr...    28   9.8  
U88309-2|AAB42334.1|  211|Caenorhabditis elegans Hypothetical pr...    28   9.8  
AF000299-1|AAC47980.1|  210|Caenorhabditis elegans Hypothetical ...    28   9.8  

>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
            protein 1, isoformb protein.
          Length = 1437

 Score = 33.1 bits (72), Expect = 0.34
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -3

Query: 1031 PPGXXXKXRXPPPRGGXKXGXPPP 960
            PPG       PPP GG K G PPP
Sbjct: 764  PPGGCPPPPPPPPPGGFKGGPPPP 787


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
            protein 1, isoforma protein.
          Length = 1435

 Score = 33.1 bits (72), Expect = 0.34
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -3

Query: 1031 PPGXXXKXRXPPPRGGXKXGXPPP 960
            PPG       PPP GG K G PPP
Sbjct: 764  PPGGCPPPPPPPPPGGFKGGPPPP 787


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 33.1 bits (72), Expect = 0.34
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -3

Query: 1031 PPGXXXKXRXPPPRGGXKXGXPPP 960
            PPG       PPP GG K G PPP
Sbjct: 347  PPGGCPPPPPPPPPGGFKGGPPPP 370


>Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 15/36 (41%), Positives = 16/36 (44%)
 Frame = +3

Query: 489 PPXPXGGGGGXXGFFLXXXRGLSPXXPRGWGXXCGG 596
           PP P GGG G  G       G +P  P   G  CGG
Sbjct: 51  PPAPCGGGCGGGGGGCGGGGGCAP-PPAPCGGGCGG 85


>Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 15/36 (41%), Positives = 16/36 (44%)
 Frame = +3

Query: 489 PPXPXGGGGGXXGFFLXXXRGLSPXXPRGWGXXCGG 596
           PP P GGG G  G       G +P  P   G  CGG
Sbjct: 51  PPAPCGGGCGGGGGGCGGGGGCAP-PPAPCGGGCGG 85


>U88309-2|AAB42334.1|  211|Caenorhabditis elegans Hypothetical protein
            T23B3.5 protein.
          Length = 211

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 1025 GXXXKXRXPPPRGGXKXGXPPP 960
            G   K + PPP+   K G PPP
Sbjct: 22   GCGGKKKPPPPKSASKMGPPPP 43


>AF000299-1|AAC47980.1|  210|Caenorhabditis elegans Hypothetical
            protein E03H12.5 protein.
          Length = 210

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 1025 GXXXKXRXPPPRGGXKXGXPPP 960
            G   K + PPP+   K G PPP
Sbjct: 22   GCGGKKKPPPPKSASKMGPPPP 43


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,296,485
Number of Sequences: 27780
Number of extensions: 131106
Number of successful extensions: 601
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 552
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2835266498
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)