Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_C11
         (861 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0311 + 27782110-27782326,27784121-27784268,27784394-277844...   132   3e-31
06_03_0915 - 25929433-25930893                                         33   0.29 
06_03_0598 + 22621765-22624795,22624903-22625066,22625290-226253...    30   2.1  
10_07_0147 + 13404711-13404764,13404865-13405232,13406105-134061...    29   4.8  
01_05_0132 - 18446105-18446197,18446281-18446372,18446684-184467...    29   6.3  

>02_05_0311 +
           27782110-27782326,27784121-27784268,27784394-27784478,
           27784555-27784650,27785666-27785731,27785900-27785998,
           27786145-27786258,27786468-27786578,27786672-27786734,
           27786816-27786908,27787960-27788073,27788440-27788505,
           27788782-27788994,27789086-27789116,27789459-27791587
          Length = 1214

 Score =  132 bits (320), Expect = 3e-31
 Identities = 58/187 (31%), Positives = 115/187 (61%)
 Frame = +2

Query: 203 FTWVEYLWEQYLSLRQLKIYKTNNTIPEDLKEMLNEDLFKKARLYGIDKAQFKIVKELYS 382
           F  + Y++E YL +RQ +  K   T+P+ L  +++ + F+++R Y +DK++F  + E  +
Sbjct: 74  FMILMYIFETYLDIRQHRALKLP-TLPKPLVGVISGEKFERSRAYSLDKSKFHFIHEAVT 132

Query: 383 TILTSVILYNKWIYVAWRKSEQIGAMFNISPDREIIISCIFMTFITLFNFIVNKPFTIYG 562
            ++ + ILY + +   W+KS ++     ++ + EI+ +  F+  + +++ I + PF++Y 
Sbjct: 133 ILMDTTILYYRVLPWVWKKSGELATNAGLNAENEILHTLAFLAGVMIWSQITDLPFSLYS 192

Query: 563 VFVLEERHGFNKQTVRFFIKDQIKSLFLSLVITLPIISVAIYIIMLGGDMFVVWLWLFTT 742
            FV+E +HGFNKQT+  FI+D IK + LS+++  PI++  I I+  GG    ++LW F  
Sbjct: 193 TFVIEAKHGFNKQTIWLFIRDMIKGILLSILLGPPIVAAIIIIVQNGGPYLAIYLWGFMF 252

Query: 743 VATLLLL 763
             +L+++
Sbjct: 253 ALSLVMM 259



 Score = 37.5 bits (83), Expect = 0.014
 Identities = 15/24 (62%), Positives = 19/24 (79%)
 Frame = +1

Query: 760 VTLYPTVIAPWFDXFVPLPDGSLR 831
           +T+YP VIAP F+ F PLP+G LR
Sbjct: 259 MTIYPIVIAPLFNKFTPLPEGVLR 282


>06_03_0915 - 25929433-25930893
          Length = 486

 Score = 33.1 bits (72), Expect = 0.29
 Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
 Frame = +2

Query: 512 FITLFNFIVNKPFTIYGVFVLEERHGFNKQTVRFFIKDQIKSLFLSLVITLPIISVAIYI 691
           F ++ NFIV   + I+ V V    H   +QTV   I  ++       ++TL ++ +A  +
Sbjct: 349 FSSILNFIVRIGYVIHLVLVFPVVHFSLRQTVDSLIFGELAPHSRKKMLTLTVVLLA--L 406

Query: 692 IMLGGDMFV-VWL-WLFTTVATLLLLHYI 772
           I LG  M   +W+ + FT   T L L +I
Sbjct: 407 IYLGSTMIPNIWVAFKFTGATTGLALGFI 435


>06_03_0598 +
           22621765-22624795,22624903-22625066,22625290-22625328,
           22625479-22625487
          Length = 1080

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 18/37 (48%), Positives = 23/37 (62%)
 Frame = +2

Query: 620 KDQIKSLFLSLVITLPIISVAIYIIMLGGDMFVVWLW 730
           K + KSL L LVI +PIIS+AI  +      F V+LW
Sbjct: 760 KRRHKSLVLVLVIVIPIISIAIICL-----SFAVFLW 791


>10_07_0147 +
           13404711-13404764,13404865-13405232,13406105-13406153,
           13406374-13406470,13406863-13407011,13407554-13407667,
           13408196-13408327,13409143-13409256,13410233-13410454
          Length = 432

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 514 KCHKNATYNYLSIWRDVEHCSNLFTF 437
           K  K++ YNY+  WR++   SNL TF
Sbjct: 365 KAIKSSPYNYVRTWRNMHKQSNLPTF 390


>01_05_0132 -
           18446105-18446197,18446281-18446372,18446684-18446783,
           18446855-18447046,18447216-18447536,18447848-18447943,
           18448006-18448098,18448181-18448306,18448358-18449053,
           18449130-18449162
          Length = 613

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 16/55 (29%), Positives = 30/55 (54%)
 Frame = -1

Query: 504 KMQLIIISLSGEMLNIAPICSLFLHAT*IHLLYNITDVSIVLYSSLTILNCALSI 340
           K Q ++ ++    L + P    F+H+  ++LL NI D+    ++SLT+ +   SI
Sbjct: 160 KRQFVLYTIG---LILCPTTERFVHSDYLNLLINIADIKRTNWASLTLNHLKRSI 211


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,673,709
Number of Sequences: 37544
Number of extensions: 360035
Number of successful extensions: 867
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)