Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_C10
         (874 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0871 - 7230228-7230338,7231055-7231348,7231972-7232148,723...    24   6.8  
02_05_0833 + 32080845-32081118,32081483-32081663,32081825-320819...    28   8.5  

>07_01_0871 -
           7230228-7230338,7231055-7231348,7231972-7232148,
           7232513-7232551,7232734-7234057,7238145-7238189,
           7238456-7238498,7238680-7238716,7239035-7239325,
           7239634-7239685,7239690-7239773,7240064-7240137,
           7240703-7241641
          Length = 1169

 Score = 24.2 bits (50), Expect(2) = 6.8
 Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = -1

Query: 313 DCYFRCTDVMSKIPCVS-CVFSK 248
           DCY    DV  K+PC S C+  K
Sbjct: 375 DCYGYIVDVGRKVPCSSGCICYK 397



 Score = 22.6 bits (46), Expect(2) = 6.8
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -1

Query: 409 CSCCNCRQECYFY 371
           C CC+   +CY Y
Sbjct: 367 CKCCSVAGDCYGY 379


>02_05_0833 +
           32080845-32081118,32081483-32081663,32081825-32081999,
           32082088-32082220,32082303-32082373,32082738-32082821,
           32083106-32083196,32083315-32083835,32083932-32084096,
           32084181-32084399,32084859-32084986,32085104-32085293,
           32085478-32085561,32085643-32085740,32086127-32086391,
           32086511-32086673,32086792-32086972,32087299-32087370,
           32087473-32087614
          Length = 1078

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -2

Query: 225 FLAAFKLTAFSCFPMAETTPLDLL-IVPLYGIDIIYFPQ 112
           FL AF     +C+P+A T   D   +V +Y +D ++FP+
Sbjct: 190 FLNAFTYPDRTCYPVASTNAKDFYNLVDVY-LDAVFFPR 227


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,306,358
Number of Sequences: 37544
Number of extensions: 328243
Number of successful extensions: 803
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)