Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_C09
(911 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75535-1|CAA99827.1| 1127|Caenorhabditis elegans Hypothetical pr... 112 3e-25
U00050-9|AAA50695.2| 1154|Caenorhabditis elegans Hypothetical pr... 51 1e-06
U13875-11|AAA21158.1| 1193|Caenorhabditis elegans Rna polymerase... 48 1e-05
Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z68315-5|CAE48501.1| 689|Caenorhabditis elegans Hypothetical pr... 31 1.5
AY037802-1|AAK94767.1| 669|Caenorhabditis elegans GLY-2 protein. 30 2.6
AY037800-1|AAK94765.1| 661|Caenorhabditis elegans GLY-2 protein. 30 2.6
AF154122-1|AAF74523.1| 669|Caenorhabditis elegans N-acetylgluco... 30 2.6
AC006625-9|AAK68273.1| 669|Caenorhabditis elegans Glycosylation... 30 2.6
AF040655-12|AAB95039.1| 507|Caenorhabditis elegans Hypothetical... 29 3.5
>Z75535-1|CAA99827.1| 1127|Caenorhabditis elegans Hypothetical
protein F14B4.3 protein.
Length = 1127
Score = 112 bits (270), Expect = 3e-25
Identities = 60/158 (37%), Positives = 93/158 (58%), Gaps = 3/158 (1%)
Frame = +2
Query: 266 HIDSFNYMLDDGLKFAIADLLPSE-FELPSGEKVKVTIDEAAFAKPNVPMDTVGVKSQV- 439
H+DSF++++ G +FA A +P+E F L +G+ V + A KP + +
Sbjct: 9 HVDSFDFLVSKGCQFA-AQAVPAEKFRLKNGDAVTMKFTSAQLHKPTLDTGAKLTSDTLP 67
Query: 440 VLPTECRQRAATYKGELKIRVTLCIDG-RSVTIERSLGYLPIMIXSKMCHXADLSPEELI 616
+LP ECRQR TY G LK+ + + ++G R IE LG +PIM+ S+ CH +S +EL+
Sbjct: 68 LLPAECRQRGLTYAGNLKVGIDVHVNGSRLDIIEIILGKVPIMLRSEGCHLRGMSRKELV 127
Query: 617 EKNEHADEWGGYFVIXGXERLPRMLLVTRRXYPVAIKR 730
E E GGYF++ G E++ R+L+ RR +P+AI R
Sbjct: 128 VAGEEPIEKGGYFIVNGSEKVIRLLIANRRNFPIAIIR 165
>U00050-9|AAA50695.2| 1154|Caenorhabditis elegans Hypothetical
protein F09F7.3 protein.
Length = 1154
Score = 51.2 bits (117), Expect = 1e-06
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +2
Query: 440 VLPTECRQRAATYKGELKIRVTLCIDGRSV-TIERSLGYLPIMIXSKMCHXADLSPEELI 616
+ P ECR R TY + + + + V + +G +PIM+ S C DL+ EEL
Sbjct: 100 ITPQECRLRDMTYSAPISVDIEYTRGNQRVFKKDLIIGRMPIMLRSSKCILRDLAEEELA 159
Query: 617 EKNEHADEWGGYFVIXGXERL 679
E + GGYFV+ G E++
Sbjct: 160 RVQECPYDPGGYFVVKGSEKV 180
>U13875-11|AAA21158.1| 1193|Caenorhabditis elegans Rna polymerase ii
(b) subunit protein2 protein.
Length = 1193
Score = 47.6 bits (108), Expect = 1e-05
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Frame = +2
Query: 440 VLPTECRQRAATYKGELKIRVTLCIDGRSVTIERS-----LGYLPIMIXSKMCHXADLSP 604
++P E R R TY L + +T + E+ +G +P+M+ S C ++++
Sbjct: 115 MMPNEARLRNLTYASPLYVDITKVVTRDDSATEKVYDKVFVGKVPVMLRSSYCMLSNMTD 174
Query: 605 EELIEKNEHADEWGGYFVIXGXERL 679
+L E NE + GGYFVI G E++
Sbjct: 175 RDLTELNECPLDPGGYFVINGSEKV 199
>Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical protein
T23F1.5 protein.
Length = 1262
Score = 33.1 bits (72), Expect = 0.28
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Frame = +2
Query: 221 PPKIANPYLQSLGAPHIDSFNY------MLDDGLKFAIADLLPSEFELPSGEKVKVTIDE 382
PP NPY GAP + + L+DG+ F + +LP E+ + ++ +V
Sbjct: 887 PPPRNNPYAPPEGAPRVPNRLIGKPRILCLEDGISFEVKTILPLTGEVFANDRKRVLECH 946
Query: 383 AAF---AKPN--VPMDTVGVKS 433
+F AKP +P T GVK+
Sbjct: 947 KSFTEEAKPKMFLPFSTCGVKN 968
>Z68315-5|CAE48501.1| 689|Caenorhabditis elegans Hypothetical
protein F28C6.4b protein.
Length = 689
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 242 TDLLFLAVFYNLGGLCTPMMGSGLVFLDSC*FNYVLTFIFLIYN 111
+ +L L V YN+G L + + + F+ C ++ TFI +I+N
Sbjct: 604 SQILLLLVIYNMGKLFSKLNLGSVEFVTLCMSSFFYTFINIIFN 647
>AY037802-1|AAK94767.1| 669|Caenorhabditis elegans GLY-2 protein.
Length = 669
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Frame = +2
Query: 236 NPYLQSLGAPH---IDSFNYM-LDDGLKFAIADLLPSEF 340
NPY++ +G PH +D FN + L++ +K AI+ L P F
Sbjct: 493 NPYMEKIGEPHVITVDIFNELELEEAIKRAIS-LKPKHF 530
>AY037800-1|AAK94765.1| 661|Caenorhabditis elegans GLY-2 protein.
Length = 661
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Frame = +2
Query: 236 NPYLQSLGAPH---IDSFNYM-LDDGLKFAIADLLPSEF 340
NPY++ +G PH +D FN + L++ +K AI+ L P F
Sbjct: 485 NPYMEKIGEPHVITVDIFNELELEEAIKRAIS-LKPKHF 522
>AF154122-1|AAF74523.1| 669|Caenorhabditis elegans
N-acetylglucosaminyltransferase V protein.
Length = 669
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Frame = +2
Query: 236 NPYLQSLGAPH---IDSFNYM-LDDGLKFAIADLLPSEF 340
NPY++ +G PH +D FN + L++ +K AI+ L P F
Sbjct: 493 NPYMEKIGEPHVITVDIFNELELEEAIKRAIS-LKPKHF 530
>AC006625-9|AAK68273.1| 669|Caenorhabditis elegans Glycosylation
related protein 2 protein.
Length = 669
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Frame = +2
Query: 236 NPYLQSLGAPH---IDSFNYM-LDDGLKFAIADLLPSEF 340
NPY++ +G PH +D FN + L++ +K AI+ L P F
Sbjct: 493 NPYMEKIGEPHVITVDIFNELELEEAIKRAIS-LKPKHF 530
>AF040655-12|AAB95039.1| 507|Caenorhabditis elegans Hypothetical
protein T24E12.1 protein.
Length = 507
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -3
Query: 462 CRHSVGRTT*DLTPTVSIGTLGLANAASSIVTLTF--SPLGNSNSDGNRSAIANFKPSSS 289
CRH+ R L TV T L + + L SP+ N + S I++ PSSS
Sbjct: 45 CRHTQARRIFSLEATVRAQTQELKQLKAEVQALRQPNSPVSKVNMNSPESGISSSSPSSS 104
Query: 288 I*LNES 271
L +S
Sbjct: 105 TCLEKS 110
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,617,334
Number of Sequences: 27780
Number of extensions: 366732
Number of successful extensions: 800
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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